RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 CFAP97Q9P2B7 532 aa11.94□□□□□ -0.5
RTN4-211ENST00000438462 CPQQ9Y646 472 aa11.94□□□□□ -0.5
RTN4-211ENST00000438462 MYH10P35580 1976 aa11.94□□□□□ -0.5
RTN4-211ENST00000438462 CCDC168Q8NDH2 2452 aa11.93□□□□□ -0.5
RTN4-211ENST00000438462 E7EWF7 191 aa11.93□□□□□ -0.5
RTN4-211ENST00000438462 CYP21A2P08686 494 aa11.93□□□□□ -0.5
RTN4-211ENST00000438462 ODC1P11926 461 aa11.93□□□□□ -0.5
RTN4-211ENST00000438462 KLRB1Q12918 225 aa11.93□□□□□ -0.5
RTN4-211ENST00000438462 PPP2R5CQ13362 524 aa11.93□□□□□ -0.5
RTN4-211ENST00000438462 ZNF211Q13398 564 aaPredicted RBP11.93□□□□□ -0.5
RTN4-211ENST00000438462 CTTNQ14247 550 aaKnown RBP11.93□□□□□ -0.5
RTN4-211ENST00000438462 TESK1Q15569 626 aa11.93□□□□□ -0.5
RTN4-211ENST00000438462 ANO4Q32M45 955 aa11.93□□□□□ -0.5
RTN4-211ENST00000438462 SPNS3Q6ZMD2 512 aa11.93□□□□□ -0.5
RTN4-211ENST00000438462 MAEAQ7L5Y9 396 aa11.93□□□□□ -0.5
RTN4-211ENST00000438462 LRRTM3Q86VH5 581 aa11.93□□□□□ -0.5
RTN4-211ENST00000438462 EFCAB3Q8N7B9 438 aa11.93□□□□□ -0.5
RTN4-211ENST00000438462 FANCBQ8NB91 859 aa11.93□□□□□ -0.5
RTN4-211ENST00000438462 MAPK15Q8TD08 544 aa11.93□□□□□ -0.5
RTN4-211ENST00000438462 MYRFLQ96LU7 910 aa11.93□□□□□ -0.5
RTN4-211ENST00000438462 ZMYND12Q9H0C1 365 aa11.93□□□□□ -0.5
RTN4-211ENST00000438462 C2orf40Q9H1Z8 148 aa11.93□□□□□ -0.5
RTN4-211ENST00000438462 CDT1Q9H211 546 aa11.93□□□□□ -0.5
RTN4-211ENST00000438462 SLKQ9H2G2 1235 aaPredicted RBP11.93□□□□□ -0.5
RTN4-211ENST00000438462 VAV3Q9UKW4 847 aa11.93□□□□□ -0.5
RTN4-211ENST00000438462 V9GY48 417 aaPredicted RBP11.93□□□□□ -0.5
RTN4-211ENST00000438462 ESPL1Q14674 2120 aa11.92□□□□□ -0.5
RTN4-211ENST00000438462 SH2B2O14492 632 aaPredicted RBP11.92□□□□□ -0.5
RTN4-211ENST00000438462 PRPF40AO75400 957 aaKnown RBP11.92□□□□□ -0.5
RTN4-211ENST00000438462 LDLRP01130 860 aa11.92□□□□□ -0.5
RTN4-211ENST00000438462 IGHV4-34P06331 123 aa11.92□□□□□ -0.5
RTN4-211ENST00000438462 RXRGP48443 463 aa11.92□□□□□ -0.5
RTN4-211ENST00000438462 FUT2Q10981 343 aa11.92□□□□□ -0.5
RTN4-211ENST00000438462 SAFBQ15424 915 aaKnown RBP eCLIP11.92□□□□□ -0.51e-6■■□□□ 14.5
RTN4-211ENST00000438462 DDR2Q16832 855 aa11.92□□□□□ -0.5
RTN4-211ENST00000438462 APBB1IPQ7Z5R6 666 aaPredicted RBP11.92□□□□□ -0.5
RTN4-211ENST00000438462 JAMLQ86YT9 394 aa11.92□□□□□ -0.5
RTN4-211ENST00000438462 GRAMD1AQ96CP6 724 aa11.92□□□□□ -0.5
RTN4-211ENST00000438462 TCTN2Q96GX1 697 aa11.92□□□□□ -0.5
RTN4-211ENST00000438462 DYDC2Q96IM9 177 aa11.92□□□□□ -0.5
RTN4-211ENST00000438462 TRIM9Q9C026 710 aa11.92□□□□□ -0.5
RTN4-211ENST00000438462 TTC12Q9H892 705 aaPredicted RBP11.92□□□□□ -0.5
RTN4-211ENST00000438462 SEPT10Q9P0V9 454 aa11.92□□□□□ -0.5
RTN4-211ENST00000438462 PRR19A6NJB7 356 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 USO1O60763 962 aaKnown RBP11.91□□□□□ -0.5
RTN4-211ENST00000438462 GP1BAP07359 652 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 CKMT1AP12532 417 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 TGM2P21980 687 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 PDE1AP54750 535 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 NXPH1P58417 271 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 SLC7A9P82251 487 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 ZNF568Q3ZCX4 644 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 LACTB2Q53H82 288 aaPredicted RBP11.91□□□□□ -0.5
RTN4-211ENST00000438462 NT5DC1Q5TFE4 455 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 CASC1Q6TDU7 716 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 OXR1Q8N573 874 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 BSNDQ8WZ55 320 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 ARRDC3Q96B67 414 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 LURAP1Q96LR2 239 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 CCDC43Q96MW1 224 aaKnown RBP11.91□□□□□ -0.5
RTN4-211ENST00000438462 CHMP4BQ9H444 224 aaKnown RBP11.91□□□□□ -0.5
RTN4-211ENST00000438462 ZSWIM4Q9H7M6 989 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 AASDHPPTQ9NRN7 309 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 DIAPH3Q9NSV4 1193 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 TBC1D14Q9P2M4 693 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 SEL1LQ9UBV2 794 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 ERRFI1Q9UJM3 462 aaPredicted RBP11.91□□□□□ -0.5
RTN4-211ENST00000438462 ACSL6Q9UKU0 697 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 PCDHB5Q9Y5E4 795 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 PCDHGA7Q9Y5G6 932 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 SLC12A7Q9Y666 1083 aa11.91□□□□□ -0.5
RTN4-211ENST00000438462 A0A1W2PPC4 97 aa11.9□□□□□ -0.5
RTN4-211ENST00000438462 MS4A1P11836 297 aa11.9□□□□□ -0.5
RTN4-211ENST00000438462 CD38P28907 300 aa11.9□□□□□ -0.5
RTN4-211ENST00000438462 LRPAP1P30533 357 aa11.9□□□□□ -0.5
RTN4-211ENST00000438462 SMARCB1Q12824 385 aa11.9□□□□□ -0.5
RTN4-211ENST00000438462 HS1BP3Q53T59 392 aa11.9□□□□□ -0.5
RTN4-211ENST00000438462 NACC1Q96RE7 527 aa11.9□□□□□ -0.5
RTN4-211ENST00000438462 KIFC3Q9BVG8 833 aa11.9□□□□□ -0.5
RTN4-211ENST00000438462 SLC12A9Q9BXP2 914 aa11.9□□□□□ -0.5
RTN4-211ENST00000438462 BTBD1Q9H0C5 482 aa11.9□□□□□ -0.5
RTN4-211ENST00000438462 RNF38Q9H0F5 515 aa11.9□□□□□ -0.5
RTN4-211ENST00000438462 LHX5Q9H2C1 402 aa11.9□□□□□ -0.5
RTN4-211ENST00000438462 TMLHEQ9NVH6 421 aa11.9□□□□□ -0.5
RTN4-211ENST00000438462 PHTF1Q9UMS5 762 aa11.9□□□□□ -0.5
RTN4-211ENST00000438462 CCDC187A0A096LP49 1063 aa11.89□□□□□ -0.51
RTN4-211ENST00000438462 A0A1W2PR77 199 aa11.89□□□□□ -0.51
RTN4-211ENST00000438462 PPEF2O14830 753 aa11.89□□□□□ -0.51
RTN4-211ENST00000438462 FFAR2O15552 330 aa11.89□□□□□ -0.51
RTN4-211ENST00000438462 PRC1O43663 620 aa11.89□□□□□ -0.51
RTN4-211ENST00000438462 NADKO95544 446 aaPredicted RBP11.89□□□□□ -0.51
RTN4-211ENST00000438462 SPAG1Q07617 926 aa11.89□□□□□ -0.51
RTN4-211ENST00000438462 EIF2S3LQ2VIR3 472 aaKnown RBP11.89□□□□□ -0.51
RTN4-211ENST00000438462 TMEM25Q86YD3 366 aa11.89□□□□□ -0.51
RTN4-211ENST00000438462 OR4C6Q8NH72 309 aa11.89□□□□□ -0.51
RTN4-211ENST00000438462 SENP8Q96LD8 212 aa11.89□□□□□ -0.51
RTN4-211ENST00000438462 HEXIM2Q96MH2 286 aaKnown RBP11.89□□□□□ -0.51
RTN4-211ENST00000438462 MDFIQ99750 246 aa11.89□□□□□ -0.51
RTN4-211ENST00000438462 IL25Q9H293 177 aa11.89□□□□□ -0.51
RTN4-211ENST00000438462 SPHK2Q9NRA0 654 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms