RNA–Protein interactions for RNA: ENST00000437999.5

CCDC93-203, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-203ENST00000437999 CLEC3AO75596 197 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 TOM1L1O75674 476 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 EFEMP2O95967 443 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 SOD2P04179 222 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 THP07101 528 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 MCF2P10911 925 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 HARSP12081 509 aaKnown RBP5.67□□□□□ -1.5
CCDC93-203ENST00000437999 PROZP22891 400 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 ZNF131P52739 623 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 NCKAP1LP55160 1127 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 OSTNP61366 133 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 RNF4P78317 190 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 POU5F1Q01860 360 aaKnown RBP5.67□□□□□ -1.5
CCDC93-203ENST00000437999 TUSC3Q13454 348 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 SMAD4Q13485 552 aaKnown RBP5.67□□□□□ -1.5
CCDC93-203ENST00000437999 PTPN14Q15678 1187 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 NAB2Q15742 525 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 SMAD2Q15796 467 aaKnown RBP5.67□□□□□ -1.5
CCDC93-203ENST00000437999 ZNF568Q3ZCX4 644 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 GLRA4Q5JXX5 417 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 ANKRD54Q6NXT1 300 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 LVRNQ6Q4G3 990 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 MPZL3Q6UWV2 235 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 HAUS6Q7Z4H7 955 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 THAP5Q7Z6K1 395 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 WFDC3Q8IUB2 231 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 PASD1Q8IV76 773 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 SUGP1Q8IWZ8 645 aaKnown RBP5.67□□□□□ -1.5
CCDC93-203ENST00000437999 RNF168Q8IYW5 571 aaPredicted RBP5.67□□□□□ -1.5
CCDC93-203ENST00000437999 C19orf47Q8N9M1 422 aaKnown RBP5.67□□□□□ -1.5
CCDC93-203ENST00000437999 SMRP1Q8NCR6 262 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 ASB11Q8WXH4 323 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 EXOC2Q96KP1 924 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 DHRS1Q96LJ7 313 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 HSPA12BQ96MM6 686 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 ACAP3Q96P50 834 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 KLHL5Q96PQ7 755 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 FIZ1Q96SL8 496 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 TCHPQ9BT92 498 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 HERC2P3Q9BVR0 1158 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 CCDC94Q9BW85 323 aaPredicted RBP5.67□□□□□ -1.5
CCDC93-203ENST00000437999 SPATA9Q9BWV2 254 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 APOL5Q9BWW9 433 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 GPR62Q9BZJ7 368 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 HAPLN2Q9GZV7 340 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 PARVGQ9HBI0 331 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 MRPL17Q9NRX2 175 aaKnown RBP5.67□□□□□ -1.5
CCDC93-203ENST00000437999 SEMA3GQ9NS98 782 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 ANKFY1Q9P2R3 1169 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 STK39Q9UEW8 545 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 FAM50BQ9Y247 325 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 IRAK3Q9Y616 596 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 TTC28Q96AY4 2481 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 CUL9Q8IWT3 2517 aa5.67□□□□□ -1.5
CCDC93-203ENST00000437999 NCOR1O75376 2440 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 SMIM28A0A1B0GU29 152 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 A0A1W2PQH9 124 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 K7ENM7 598 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 CLDN3O15551 220 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 MEFVO15553 781 aaPredicted RBP5.66□□□□□ -1.5
CCDC93-203ENST00000437999 CUTAO60888 179 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 LRRN2O75325 713 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 TBCAO75347 108 aaKnown RBP5.66□□□□□ -1.5
CCDC93-203ENST00000437999 TADA2AO75478 443 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 RNASEH2AO75792 299 aaKnown RBP5.66□□□□□ -1.5
CCDC93-203ENST00000437999 YEATS4O95619 227 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 URODP06132 367 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 CNPP09543 421 aaKnown RBP5.66□□□□□ -1.5
CCDC93-203ENST00000437999 SRGAP2BP0DMP2 458 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 SRFP11831 508 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 EPCAMP16422 314 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 IGFBP6P24592 240 aaPredicted RBP5.66□□□□□ -1.5
CCDC93-203ENST00000437999 KLRC2P26717 231 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 NMT1P30419 496 aaKnown RBP5.66□□□□□ -1.5
CCDC93-203ENST00000437999 STAT6P42226 847 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 MATR3P43243 847 aaKnown RBP eCLIP5.66□□□□□ -1.54e-6■■□□□ 12.5
CCDC93-203ENST00000437999 GLUD2P49448 558 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 CLCNKBP51801 687 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 GTF2BQ00403 316 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 DSG1Q02413 1049 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 ZP2Q05996 745 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 BNIP3Q12983 259 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 HSP90AA2PQ14568 343 aaPredicted RBP5.66□□□□□ -1.5
CCDC93-203ENST00000437999 NOLC1Q14978 699 aaKnown RBP eCLIP5.66□□□□□ -1.5
CCDC93-203ENST00000437999 ZC2HC1CQ53FD0 456 aaPredicted RBP5.66□□□□□ -1.5
CCDC93-203ENST00000437999 XKR4Q5GH76 650 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 CDKAL1Q5VV42 579 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 FUT10Q6P4F1 479 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 CNNM4Q6P4Q7 775 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 SYCE2Q6PIF2 218 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 SHC4Q6S5L8 630 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 ALKAL1Q6UXT8 129 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 ZPBP2Q6X784 338 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 CCDC73Q6ZRK6 1079 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 CBLL1Q75N03 491 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 ADHFE1Q8IWW8 467 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 ANKRD42Q8N9B4 389 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 TEX19Q8NA77 164 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 AGBL5Q8NDL9 886 aa5.66□□□□□ -1.5
CCDC93-203ENST00000437999 FLCNQ8NFG4 579 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms