RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 ZBED1O96006 694 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 ALDH2P05091 517 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 IVDP26440 423 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 RFC2P35250 354 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 OR1G1P47890 313 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 NR2C2P49116 596 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 CTCFP49711 727 aaPredicted RBP16.02■□□□□ 0.15
SGCE-205ENST00000437425 SULT1E1P49888 294 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 LBX1P52954 281 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 PMS2P54278 862 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 OTUD4Q01804 1114 aaKnown RBP16.02■□□□□ 0.15
SGCE-205ENST00000437425 ADCY2Q08462 1091 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 SMARCB1Q12824 385 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 SH3PXD2AQ5TCZ1 1133 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 PM20D1Q6GTS8 502 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 BZW1Q7L1Q6 419 aaKnown RBP16.02■□□□□ 0.15
SGCE-205ENST00000437425 BNIPLQ7Z465 357 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 NPAS4Q8IUM7 802 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 SPATA2LQ8IUW3 424 aaPredicted RBP16.02■□□□□ 0.15
SGCE-205ENST00000437425 CLEC4CQ8WTT0 213 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 UBLCP1Q8WVY7 318 aaPredicted RBP16.02■□□□□ 0.15
SGCE-205ENST00000437425 ACSF2Q96CM8 615 aaPredicted RBP16.02■□□□□ 0.15
SGCE-205ENST00000437425 SNRNP25Q9BV90 132 aaKnown RBP16.02■□□□□ 0.15
SGCE-205ENST00000437425 HIPK3Q9H422 1215 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 PCDH18Q9HCL0 1135 aa16.02■□□□□ 0.15
SGCE-205ENST00000437425 CARNS1A5YM72 827 aa16.01■□□□□ 0.15
SGCE-205ENST00000437425 APOL1O14791 398 aa16.01■□□□□ 0.15
SGCE-205ENST00000437425 IGFBP6P24592 240 aaPredicted RBP16.01■□□□□ 0.15
SGCE-205ENST00000437425 MTFR1Q15390 333 aa16.01■□□□□ 0.15
SGCE-205ENST00000437425 PAN2Q504Q3 1202 aaKnown RBP16.01■□□□□ 0.15
SGCE-205ENST00000437425 DCAF6Q58WW2 860 aa16.01■□□□□ 0.15
SGCE-205ENST00000437425 ANKRD20A8PQ5CZ79 823 aa16.01■□□□□ 0.15
SGCE-205ENST00000437425 SLC9A4Q6AI14 798 aa16.01■□□□□ 0.15
SGCE-205ENST00000437425 C4orf22Q6V702 233 aa16.01■□□□□ 0.15
SGCE-205ENST00000437425 ZNF280BQ86YH2 543 aa16.01■□□□□ 0.15
SGCE-205ENST00000437425 ANKLE1Q8NAG6 615 aa16.01■□□□□ 0.15
SGCE-205ENST00000437425 ZMIZ2Q8NF64 920 aa16.01■□□□□ 0.15
SGCE-205ENST00000437425 RSAD2Q8WXG1 361 aa16.01■□□□□ 0.15
SGCE-205ENST00000437425 ULBP1Q9BZM6 244 aa16.01■□□□□ 0.15
SGCE-205ENST00000437425 PHACTR1Q9C0D0 580 aa16.01■□□□□ 0.15
SGCE-205ENST00000437425 WBP1LQ9NX94 342 aa16.01■□□□□ 0.15
SGCE-205ENST00000437425 AP4E1Q9UPM8 1137 aa16.01■□□□□ 0.15
SGCE-205ENST00000437425 PLAAQ9Y263 795 aa16.01■□□□□ 0.15
SGCE-205ENST00000437425 ATP8A1Q9Y2Q0 1164 aa16.01■□□□□ 0.15
SGCE-205ENST00000437425 OR6C75A6NL08 312 aa16■□□□□ 0.15
SGCE-205ENST00000437425 HHLA1C9JL84 531 aa16■□□□□ 0.15
SGCE-205ENST00000437425 I3L4J1 428 aa16■□□□□ 0.15
SGCE-205ENST00000437425 SGK1O00141 431 aa16■□□□□ 0.15
SGCE-205ENST00000437425 RNF40O75150 1001 aa16■□□□□ 0.15
SGCE-205ENST00000437425 LTFP02788 710 aa16■□□□□ 0.15
SGCE-205ENST00000437425 CD48P09326 243 aa16■□□□□ 0.15
SGCE-205ENST00000437425 NUDT17P0C025 328 aa16■□□□□ 0.15
SGCE-205ENST00000437425 ARL4AP40617 200 aa16■□□□□ 0.15
SGCE-205ENST00000437425 EIF3EP60228 445 aaKnown RBP16■□□□□ 0.15
SGCE-205ENST00000437425 XRCC4Q13426 336 aa16■□□□□ 0.15
SGCE-205ENST00000437425 GPNMBQ14956 572 aa16■□□□□ 0.15
SGCE-205ENST00000437425 MORF4L2Q15014 288 aa16■□□□□ 0.15
SGCE-205ENST00000437425 NOMO1Q15155 1222 aa16■□□□□ 0.15
SGCE-205ENST00000437425 DENND2CQ68D51 928 aa16■□□□□ 0.15
SGCE-205ENST00000437425 RHBDF2Q6PJF5 856 aa16■□□□□ 0.15
SGCE-205ENST00000437425 VSTM1Q6UX27 236 aa16■□□□□ 0.15
SGCE-205ENST00000437425 RELL1Q8IUW5 271 aa16■□□□□ 0.15
SGCE-205ENST00000437425 PIK3R5Q8WYR1 880 aa16■□□□□ 0.15
SGCE-205ENST00000437425 NTAN1Q96AB6 310 aa16■□□□□ 0.15
SGCE-205ENST00000437425 CASD1Q96PB1 797 aa16■□□□□ 0.15
SGCE-205ENST00000437425 ZCWPW1Q9H0M4 648 aa16■□□□□ 0.15
SGCE-205ENST00000437425 ADAM28Q9UKQ2 775 aa16■□□□□ 0.15
SGCE-205ENST00000437425 A6NNZ2 444 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 DNALI1O14645 258 aaPredicted RBP15.99■□□□□ 0.15
SGCE-205ENST00000437425 MYZAPP0CAP1 466 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 L1CAMP32004 1257 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 ITGA8P53708 1063 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 BCAR1P56945 870 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 DYNLT1P63172 113 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 ROR1Q01973 937 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 DEUP1Q05D60 604 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 ARL13BQ3SXY8 428 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 TUBB8Q3ZCM7 444 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 HOOK3Q86VS8 718 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 OR10T2Q8NGX3 314 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 HASPINQ8TF76 798 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 TPX2Q9ULW0 747 aaKnown RBP15.99■□□□□ 0.15
SGCE-205ENST00000437425 FZD10Q9ULW2 581 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 SHOC2Q9UQ13 582 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 FAN1Q9Y2M0 1017 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 USP3Q9Y6I4 520 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 SF3B1O75533 1304 aaKnown RBP eCLIP15.99■□□□□ 0.15
SGCE-205ENST00000437425 TANC1Q9C0D5 1861 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 HMGB1P1B2RPK0 211 aaPredicted RBP15.99■□□□□ 0.15
SGCE-205ENST00000437425 H3BRJ5 948 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 H7C4K7 107 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 M0QYT0 321 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 TRIM66O15016 1216 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 ITGB1P05556 798 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 RBP3P10745 1247 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 BDNFP23560 247 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 IL4RP24394 825 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 ACTN2P35609 894 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 MAGEA11P43364 429 aa15.99■□□□□ 0.15
SGCE-205ENST00000437425 SCAPQ12770 1279 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms