RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 Q6ZS52 159 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 TMEM150AQ86TG1 271 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 ITIH5Q86UX2 942 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 SLC47A2Q86VL8 602 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 METTL23Q86XA0 190 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 TXLNBQ8N3L3 684 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 RBBP8NLQ8NC74 664 aaPredicted RBP11.55□□□□□ -0.56
HMGCL-204ENST00000436439 SPPL2BQ8TCT7 592 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 AGPAT1Q99943 283 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 SLC46A2Q9BY10 475 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 SDCBP2Q9H190 292 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 LUC7LQ9NQ29 371 aaKnown RBP11.55□□□□□ -0.56
HMGCL-204ENST00000436439 C2orf42Q9NWW7 574 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 ABI2Q9NYB9 513 aaPredicted RBP11.55□□□□□ -0.56
HMGCL-204ENST00000436439 DLL3Q9NYJ7 618 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 NXF1Q9UBU9 619 aaKnown RBP11.55□□□□□ -0.56
HMGCL-204ENST00000436439 NAGPAQ9UK23 515 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 REXO2Q9Y3B8 237 aaKnown RBP11.55□□□□□ -0.56
HMGCL-204ENST00000436439 PCDHB4Q9Y5E5 795 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 HELZP42694 1942 aaKnown RBP11.55□□□□□ -0.56
HMGCL-204ENST00000436439 KIAA1549LQ6ZVL6 1849 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 ATG2BQ96BY7 2078 aa11.55□□□□□ -0.56
HMGCL-204ENST00000436439 MYBPHLA2RUH7 354 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 DDX3XO00571 662 aaKnown RBP eCLIP11.54□□□□□ -0.564e-10■■■■□ 21.5
HMGCL-204ENST00000436439 DPYSL4O14531 572 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 HCRTO43612 131 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 CILPO75339 1184 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 GZMAP12544 262 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 HMGA1P17096 107 aaKnown RBP11.54□□□□□ -0.56
HMGCL-204ENST00000436439 TGM1P22735 817 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 CTHP32929 405 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 USP8P40818 1118 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 CCR3P51677 355 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 GFPT1Q06210 699 aaPredicted RBP11.54□□□□□ -0.56
HMGCL-204ENST00000436439 LPAL2Q16609 132 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 CCDC142Q17RM4 750 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 RSPO4Q2I0M5 234 aaPredicted RBP11.54□□□□□ -0.56
HMGCL-204ENST00000436439 ARHGAP29Q52LW3 1261 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 ARHGAP15Q53QZ3 475 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 SDHAF4Q5VUM1 108 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 NOP9Q86U38 636 aaKnown RBP11.54□□□□□ -0.56
HMGCL-204ENST00000436439 UNC93AQ86WB7 457 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 THEM5Q8N1Q8 247 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 TOP6BLQ8N6T0 577 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 ACRBPQ8NEB7 543 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 RIN3Q8TB24 985 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 SPATA18Q8TC71 538 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 BPIFB1Q8TDL5 484 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 DESI2Q9BSY9 194 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 IER2Q9BTL4 223 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 FAM126AQ9BYI3 521 aaPredicted RBP11.54□□□□□ -0.56
HMGCL-204ENST00000436439 TASP1Q9H6P5 420 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 SMYD3Q9H7B4 428 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 C8orf33Q9H7E9 229 aaPredicted RBP11.54□□□□□ -0.56
HMGCL-204ENST00000436439 PARD6AQ9NPB6 346 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 OBP2AQ9NY56 170 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 INTUQ9ULD6 942 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 L1RE1Q9UN81 338 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 SNX9Q9Y5X1 595 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 MYH10P35580 1976 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 K7ESF4 209 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 PJA2O43164 708 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 CLSTN1O94985 981 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 SLU7O95391 586 aaKnown RBP11.54□□□□□ -0.56
HMGCL-204ENST00000436439 FGF19O95750 216 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 F11P03951 625 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 CHRNB2P17787 502 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 TNFAIP3P21580 790 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 ACAT1P24752 427 aaKnown RBP11.54□□□□□ -0.56
HMGCL-204ENST00000436439 WEE1P30291 646 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 CDC25CP30307 473 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 CXCL12P48061 93 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 VAV2P52735 878 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 RAD23BP54727 409 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 FMO1Q01740 532 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 SRSF5Q13243 272 aaKnown RBP11.54□□□□□ -0.56
HMGCL-204ENST00000436439 PUM1Q14671 1186 aaKnown RBP eCLIP11.54□□□□□ -0.56
HMGCL-204ENST00000436439 VEPH1Q14D04 833 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 PON2Q15165 354 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 SOWAHAQ2M3V2 549 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 ALKBH5Q6P6C2 394 aaKnown RBP11.54□□□□□ -0.56
HMGCL-204ENST00000436439 SCARA5Q6ZMJ2 495 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 TRIM72Q6ZMU5 477 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 DGLUCYQ7Z3D6 616 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 OSTM1Q86WC4 334 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 PDCL2Q8N4E4 241 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 WHAMMQ8TF30 809 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 C2orf15Q8WU43 125 aaKnown RBP11.54□□□□□ -0.56
HMGCL-204ENST00000436439 CHFRQ96EP1 664 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 MSANTD3Q96H12 275 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 MMS19Q96T76 1030 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.54□□□□□ -0.56
HMGCL-204ENST00000436439 TSGA10Q9BZW7 698 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 DNAI1Q9UI46 699 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 KIAA1257Q9ULG3 409 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 PCDHGC3Q9UN70 934 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 CCL26Q9Y258 94 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 PCDHA13Q9Y5I0 950 aa11.54□□□□□ -0.56
HMGCL-204ENST00000436439 GPR179Q6PRD1 2367 aa11.53□□□□□ -0.56
HMGCL-204ENST00000436439 OTOL1A6NHN0 477 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms