RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 RPF1Q9H9Y2 349 aaKnown RBP11.12□□□□□ -0.63
CPNE1-214ENST00000435747 CD93Q9NPY3 652 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 KBTBD4Q9NVX7 518 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 DERAQ9Y315 318 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 C2CD2Q9Y426 696 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 POLQO75417 2590 aa11.12□□□□□ -0.63
CPNE1-214ENST00000435747 A0A1B0GVT2 93 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 TBC1D3BA6NDS4 549 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 TADA3O75528 432 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 RFPL3O75679 317 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 YEATS4O95619 227 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 NCAM1P13591 858 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 GAP43P17677 238 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 CD6P30203 668 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 PCBP4P57723 403 aaKnown RBP11.11□□□□□ -0.63
CPNE1-214ENST00000435747 SMARCB1Q12824 385 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 SERINC3Q13530 473 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 PKP1Q13835 747 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 UBAP2LQ14157 1087 aaKnown RBP11.11□□□□□ -0.63
CPNE1-214ENST00000435747 L1TD1Q5T7N2 865 aaKnown RBP11.11□□□□□ -0.63
CPNE1-214ENST00000435747 C9orf57Q5W0N0 161 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 SCARA3Q6AZY7 606 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 SLFN12LQ6IEE8 588 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 CNNM4Q6P4Q7 775 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 SHC4Q6S5L8 630 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 KIAA1324Q6UXG2 1013 aaKnown RBP11.11□□□□□ -0.63
CPNE1-214ENST00000435747 ATG14Q6ZNE5 492 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 CCDC73Q6ZRK6 1079 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 C12orf40Q86WS4 652 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 IPO4Q8TEX9 1081 aaKnown RBP11.11□□□□□ -0.63
CPNE1-214ENST00000435747 ERLEC1Q96DZ1 483 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 ZHX3Q9H4I2 956 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 AGO2Q9UKV8 859 aaKnown RBP11.11□□□□□ -0.63
CPNE1-214ENST00000435747 ARHGAP26Q9UNA1 814 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 TCHHQ07283 1943 aa11.11□□□□□ -0.63
CPNE1-214ENST00000435747 FBN2P35556 2912 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 A0A1W2PQF6 199 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 SPTLC2O15270 562 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 ADH1CP00326 375 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 CYP11A1P05108 521 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 HDCP19113 662 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 NTSR1P30989 418 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 HOXD13P35453 343 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 MATR3P43243 847 aaKnown RBP eCLIP11.1□□□□□ -0.63
CPNE1-214ENST00000435747 GPR15P49685 360 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 CCT8P50990 548 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 EHHADHQ08426 723 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 VAC14Q08AM6 782 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 DCAF12L1Q5VU92 463 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 ADALQ6DHV7 355 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 FILIP1Q7Z7B0 1213 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 TOE1Q96GM8 510 aaKnown RBP11.1□□□□□ -0.63
CPNE1-214ENST00000435747 SENP8Q96LD8 212 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 GPR174Q9BXC1 333 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 PANK2Q9BZ23 570 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 MRPL44Q9H9J2 332 aaKnown RBP11.1□□□□□ -0.63
CPNE1-214ENST00000435747 GCNT4Q9P109 453 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 TFIP11Q9UBB9 837 aaKnown RBP11.1□□□□□ -0.63
CPNE1-214ENST00000435747 SEPT3Q9UH03 358 aa11.1□□□□□ -0.63
CPNE1-214ENST00000435747 NUMA1Q14980 2115 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 LEFTY2O00292 366 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 ENC1O14682 589 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 XPOTO43592 962 aaKnown RBP11.09□□□□□ -0.63
CPNE1-214ENST00000435747 PCDHGA12O60330 932 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 PRPF40AO75400 957 aaKnown RBP11.09□□□□□ -0.63
CPNE1-214ENST00000435747 F13A1P00488 732 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 C1SP09871 688 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 ZSCAN22P10073 491 aaPredicted RBP11.09□□□□□ -0.63
CPNE1-214ENST00000435747 ADH5P11766 374 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 MYF5P13349 255 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 PAX3P23760 479 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 TXLNAP40222 546 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 STAT6P42226 847 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 PDE6CP51160 858 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 TMEM132DQ14C87 1099 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 KIF19Q2TAC6 998 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 SDHAF4Q5VUM1 108 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 SDE2Q6IQ49 451 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 NUDT18Q6ZVK8 323 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 EPM2AIP1Q7L775 607 aaPredicted RBP11.09□□□□□ -0.63
CPNE1-214ENST00000435747 BRSK2Q8IWQ3 736 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 ADGRG2Q8IZP9 1017 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 THEM5Q8N1Q8 247 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 PDILTQ8N807 584 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 FSIP1Q8NA03 581 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 CADM4Q8NFZ8 388 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 ZFRQ96KR1 1074 aaKnown RBP11.09□□□□□ -0.63
CPNE1-214ENST00000435747 TRIM9Q9C026 710 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 SLC6A17Q9H1V8 727 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 TNMDQ9H2S6 317 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 TBC1D7Q9P0N9 293 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 EIF2B4Q9UI10 523 aaKnown RBP11.09□□□□□ -0.63
CPNE1-214ENST00000435747 PCDHB5Q9Y5E4 795 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 SNX11Q9Y5W9 270 aa11.09□□□□□ -0.63
CPNE1-214ENST00000435747 TP53BP1Q12888 1972 aaPredicted RBP11.08□□□□□ -0.64
CPNE1-214ENST00000435747 E2F8A0AVK6 867 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 C2orf78A6NCI8 922 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 SLC9A3R1O14745 358 aaPredicted RBP11.08□□□□□ -0.64
CPNE1-214ENST00000435747 TRIM66O15016 1216 aa11.08□□□□□ -0.64
CPNE1-214ENST00000435747 CUTAO60888 179 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms