RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 XXYLT1Q8NBI6 393 aa12.28□□□□□ -0.44
CHRNA1-207ENST00000435083 ZNF507Q8TCN5 953 aa12.28□□□□□ -0.44
CHRNA1-207ENST00000435083 SYAP1Q96A49 352 aaPredicted RBP12.28□□□□□ -0.44
CHRNA1-207ENST00000435083 XPO6Q96QU8 1125 aaKnown RBP12.28□□□□□ -0.44
CHRNA1-207ENST00000435083 BBS2Q9BXC9 721 aa12.28□□□□□ -0.44
CHRNA1-207ENST00000435083 LRRC27Q9C0I9 530 aa12.28□□□□□ -0.44
CHRNA1-207ENST00000435083 SLC6A17Q9H1V8 727 aa12.28□□□□□ -0.44
CHRNA1-207ENST00000435083 SMYD3Q9H7B4 428 aa12.28□□□□□ -0.44
CHRNA1-207ENST00000435083 RAD54BQ9Y620 910 aa12.28□□□□□ -0.44
CHRNA1-207ENST00000435083 CACNA1EQ15878 2313 aa12.28□□□□□ -0.44
CHRNA1-207ENST00000435083 AKAP13Q12802 2813 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 EIF3DO15371 548 aaKnown RBP eCLIP12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 TGFB1I1O43294 461 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 TLR5O60602 858 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 AP1G2O75843 785 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 STAU1O95793 577 aaKnown RBP12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 ZDHHC11BP0C7U3 371 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 TYRP14679 529 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 MAOBP27338 520 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 TUBP50607 506 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 SCAPQ12770 1279 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 SLC14A1Q13336 389 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 SLC39A14Q15043 492 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 C19orf48Q6RUI8 117 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 SCARA5Q6ZMJ2 495 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 HTR3DQ70Z44 454 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 PNPLA1Q8N8W4 532 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 SMARCD1Q96GM5 515 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 TNIP3Q96KP6 325 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 USP28Q96RU2 1077 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 DUSP9Q99956 384 aaKnown RBP12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 XYLT2Q9H1B5 865 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 TNMDQ9H2S6 317 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 FAM124BQ9H5Z6 455 aaPredicted RBP12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 UPF2Q9HAU5 1272 aaKnown RBP12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 CD93Q9NPY3 652 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 KRT82Q9NSB4 513 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 COMMD8Q9NX08 183 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 IL37Q9NZH6 218 aa12.27□□□□□ -0.44
CHRNA1-207ENST00000435083 PRRT4C9JH25 899 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 CACNG3O60359 315 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 GNSP15586 552 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 PGFP49763 221 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 BIRC3Q13489 604 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 ZNF667Q5HYK9 610 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 FAM26FQ5R3K3 315 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 TOGARAM2Q6ZUX3 1019 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 EPM2AIP1Q7L775 607 aaPredicted RBP12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 ACOT1Q86TX2 421 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 ELMO3Q96BJ8 720 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 ZNF419Q96HQ0 510 aaPredicted RBP12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 TRIM9Q9C026 710 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 CD248Q9HCU0 757 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 TLR8Q9NR97 1041 aaKnown RBP12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 CACNA2D2Q9NY47 1150 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 WDR35Q9P2L0 1181 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 SUSD2Q9UGT4 822 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 LSM7Q9UK45 103 aaKnown RBP12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 ADAMTS20P59510 1910 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 FAM92AA1XBS5 289 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 WASH3PC4AMC7 463 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 GJB3O75712 270 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 TBX18O95935 607 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 CAPNS1P04632 268 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 FTH1P19P0C7X4 201 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 CCDC130P13994 396 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 SYT1P21579 422 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 DGKGP49619 791 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 CASP4P49662 377 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 MAP3K7CLP57077 242 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 AMPD3Q01432 767 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 GOLGA8FQ08AF8 430 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 GOLGA8DPQ0D2H9 430 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 ZNF699Q32M78 642 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 WDR45BQ5MNZ6 344 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 NAXDQ8IW45 347 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 FUKQ8N0W3 1084 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 ADAMTS14Q8WXS8 1223 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 FOXJ1Q92949 421 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 BHMTQ93088 406 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 DHX58Q96C10 678 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 MRGPRX1Q96LB2 322 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 SMOQ99835 787 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 GABRG3Q99928 467 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 KLF16Q9BXK1 252 aaPredicted RBP12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 GZF1Q9H116 711 aaPredicted RBP12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 SDCBP2Q9H190 292 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 FBXO44Q9H4M3 255 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 KBTBD4Q9NVX7 518 aa12.26□□□□□ -0.45
CHRNA1-207ENST00000435083 MYH10P35580 1976 aa12.25□□□□□ -0.45
CHRNA1-207ENST00000435083 MEI4A8MW99 385 aa12.25□□□□□ -0.45
CHRNA1-207ENST00000435083 GREM1O60565 184 aa12.25□□□□□ -0.45
CHRNA1-207ENST00000435083 EXOC3O60645 756 aa12.25□□□□□ -0.45
CHRNA1-207ENST00000435083 BEST1O76090 585 aa12.25□□□□□ -0.45
CHRNA1-207ENST00000435083 ATP5C1P36542 298 aaKnown RBP12.25□□□□□ -0.45
CHRNA1-207ENST00000435083 SNRPFP62306 86 aaKnown RBP12.25□□□□□ -0.45
CHRNA1-207ENST00000435083 GRIK2Q13002 908 aa12.25□□□□□ -0.45
CHRNA1-207ENST00000435083 ORC1Q13415 861 aa12.25□□□□□ -0.45
CHRNA1-207ENST00000435083 CUL4AQ13619 759 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms