RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 KHSRPQ92945 711 aaKnown RBP eCLIP7.47□□□□□ -1.21
COL28A1-202ENST00000430711 ZNF333Q96JL9 665 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 TTC25Q96NG3 672 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 CDT1Q9H211 546 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 POPDC2Q9HBU9 364 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 PTPRHQ9HD43 1115 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 ETNK2Q9NVF9 386 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 SLC24A2Q9UI40 661 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 PACSIN3Q9UKS6 424 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 USP18Q9UMW8 372 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 HAUS5O94927 633 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 CETN2P41208 172 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 GPD2P43304 727 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 ABCG1P45844 678 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 CDH6P55285 790 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 IGBP1P78318 339 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 GBE1Q04446 702 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 GRIK3Q13003 919 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 PIGHQ14442 188 aaPredicted RBP7.47□□□□□ -1.21
COL28A1-202ENST00000430711 AMHR2Q16671 573 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 TEX44Q53QW1 395 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 FAM102AQ5T9C2 384 aaPredicted RBP7.47□□□□□ -1.21
COL28A1-202ENST00000430711 CATSPERGQ6ZRH7 1159 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 MAVSQ7Z434 540 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 USP37Q86T82 979 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 TEX2Q8IWB9 1127 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 CTAGE3PQ8IX95 158 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 POU5F2Q8N7G0 328 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 RBM15BQ8NDT2 890 aaKnown RBP7.47□□□□□ -1.21
COL28A1-202ENST00000430711 CMASQ8NFW8 434 aaPredicted RBP7.47□□□□□ -1.21
COL28A1-202ENST00000430711 PCDH19Q8TAB3 1148 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 INPP5DQ92835 1189 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 GRAMD1AQ96CP6 724 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 SRPK1Q96SB4 655 aaKnown RBP7.47□□□□□ -1.21
COL28A1-202ENST00000430711 TEX13BQ9BXU2 312 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 NIFKQ9BYG3 293 aaKnown RBP7.47□□□□□ -1.21
COL28A1-202ENST00000430711 ACAD9Q9H845 621 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 PDGFCQ9NRA1 345 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 RAB6BQ9NRW1 208 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 PCMTD2Q9NV79 361 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 ZNF358Q9NW07 568 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 PCDHGC3Q9UN70 934 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 PSAT1Q9Y617 370 aa7.47□□□□□ -1.21
COL28A1-202ENST00000430711 MRPL42Q9Y6G3 142 aaKnown RBP7.47□□□□□ -1.21
COL28A1-202ENST00000430711 LACTBL1A8MY62 500 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 H3BRJ5 948 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 INO80B-WBP1J3KQ70 363 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 CAPN9O14815 690 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 KCNN4O15554 427 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 MAFO75444 373 aaPredicted RBP7.46□□□□□ -1.21
COL28A1-202ENST00000430711 TOM1L1O75674 476 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 ZMPSTE24O75844 475 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 DCTN3O75935 186 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 ZWINTO95229 277 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 AMHP03971 560 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 PRKCGP05129 697 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 GCKP35557 465 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 STAT5BP51692 787 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 ARFIP2P53365 341 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 PITX1P78337 314 aaPredicted RBP7.46□□□□□ -1.21
COL28A1-202ENST00000430711 CDK16Q00536 496 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 KDSRQ06136 332 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 THOC5Q13769 683 aaKnown RBP7.46□□□□□ -1.21
COL28A1-202ENST00000430711 RCN2Q14257 317 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 NOMO1Q15155 1222 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 EML3Q32P44 896 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 MROH9Q5TGP6 573 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 VWA5B1Q5TIE3 1220 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 SNX30Q5VWJ9 437 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 DARS2Q6PI48 645 aaKnown RBP7.46□□□□□ -1.21
COL28A1-202ENST00000430711 MOB2Q70IA6 237 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 ARID3BQ8IVW6 561 aaPredicted RBP7.46□□□□□ -1.21
COL28A1-202ENST00000430711 ADGRF2Q8IZF7 708 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 PYROXD2Q8N2H3 581 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 C7orf31Q8N865 590 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 RXFP2Q8WXD0 754 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 APOPT1Q96IL0 206 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 PANX3Q96QZ0 392 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 INO80BQ9C086 356 aaPredicted RBP7.46□□□□□ -1.21
COL28A1-202ENST00000430711 FAM49BQ9NUQ9 324 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 ZFATQ9P243 1243 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 LNPEPQ9UIQ6 1025 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 STRIP2Q9ULQ0 834 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 PPM1HQ9ULR3 514 aa7.46□□□□□ -1.21
COL28A1-202ENST00000430711 A0A1B0GVG6 124 aa7.46□□□□□ -1.22
COL28A1-202ENST00000430711 CAPN14A8MX76 684 aa7.46□□□□□ -1.22
COL28A1-202ENST00000430711 PRR5-ARHGAP8B1AHC4 643 aa7.46□□□□□ -1.22
COL28A1-202ENST00000430711 OGTO15294 1046 aa7.46□□□□□ -1.22
COL28A1-202ENST00000430711 LSM8O95777 96 aaKnown RBP7.46□□□□□ -1.22
COL28A1-202ENST00000430711 MT-ND3P03897 115 aa7.46□□□□□ -1.22
COL28A1-202ENST00000430711 APRTP07741 180 aa7.46□□□□□ -1.22
COL28A1-202ENST00000430711 ATP6V1C1P21283 382 aa7.46□□□□□ -1.22
COL28A1-202ENST00000430711 PROZP22891 400 aa7.46□□□□□ -1.22
COL28A1-202ENST00000430711 EIF4BP23588 611 aaKnown RBP7.46□□□□□ -1.22
COL28A1-202ENST00000430711 SLC18A1P54219 525 aa7.46□□□□□ -1.22
COL28A1-202ENST00000430711 ARHGAP8P85298 464 aa7.46□□□□□ -1.22
COL28A1-202ENST00000430711 SLC18A2Q05940 514 aa7.46□□□□□ -1.22
COL28A1-202ENST00000430711 PTPN11Q06124 597 aaPredicted RBP7.46□□□□□ -1.22
COL28A1-202ENST00000430711 TRPC3Q13507 836 aa7.46□□□□□ -1.22
COL28A1-202ENST00000430711 RASA2Q15283 850 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms