RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 USP33Q8TEY7 942 aa13.18□□□□□ -0.3
SMPD4-204ENST00000430682 KREMEN1Q96MU8 473 aa13.18□□□□□ -0.3
SMPD4-204ENST00000430682 HHIPQ96QV1 700 aa13.18□□□□□ -0.3
SMPD4-204ENST00000430682 GTPBP4Q9BZE4 634 aaKnown RBP13.18□□□□□ -0.3
SMPD4-204ENST00000430682 TSPAN16Q9UKR8 245 aa13.18□□□□□ -0.3
SMPD4-204ENST00000430682 PLXND1Q9Y4D7 1925 aa13.17□□□□□ -0.3
SMPD4-204ENST00000430682 O00370 1275 aa13.17□□□□□ -0.3
SMPD4-204ENST00000430682 SLC9A3R1O14745 358 aaPredicted RBP13.17□□□□□ -0.3
SMPD4-204ENST00000430682 PMM2O15305 246 aa13.17□□□□□ -0.3
SMPD4-204ENST00000430682 KLKB1P03952 638 aa13.17□□□□□ -0.3
SMPD4-204ENST00000430682 ADH5P11766 374 aa13.17□□□□□ -0.3
SMPD4-204ENST00000430682 PI4KAP42356 2102 aa13.17□□□□□ -0.3
SMPD4-204ENST00000430682 AMPD2Q01433 879 aa13.17□□□□□ -0.3
SMPD4-204ENST00000430682 APBA1Q02410 837 aa13.17□□□□□ -0.3
SMPD4-204ENST00000430682 KDSRQ06136 332 aa13.17□□□□□ -0.3
SMPD4-204ENST00000430682 KCNH2Q12809 1159 aa13.17□□□□□ -0.3
SMPD4-204ENST00000430682 PKDCCQ504Y2 493 aa13.17□□□□□ -0.3
SMPD4-204ENST00000430682 HTR3DQ70Z44 454 aa13.17□□□□□ -0.3
SMPD4-204ENST00000430682 RRAGAQ7L523 313 aa13.17□□□□□ -0.3
SMPD4-204ENST00000430682 WDR5BQ86VZ2 330 aa13.17□□□□□ -0.3
SMPD4-204ENST00000430682 DDX42Q86XP3 938 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMPD4-204ENST00000430682 CCDC33Q8N5R6 958 aa13.17□□□□□ -0.3
SMPD4-204ENST00000430682 EHBP1Q8NDI1 1231 aa13.17□□□□□ -0.3
SMPD4-204ENST00000430682 UBXN6Q9BZV1 441 aa13.17□□□□□ -0.3
SMPD4-204ENST00000430682 NAGPAQ9UK23 515 aa13.17□□□□□ -0.3
SMPD4-204ENST00000430682 SH3BP1Q9Y3L3 701 aa13.17□□□□□ -0.3
SMPD4-204ENST00000430682 TNRC6BQ9UPQ9 1833 aaKnown RBP13.17□□□□□ -0.3
SMPD4-204ENST00000430682 CNOT1A5YKK6 2376 aaKnown RBP13.16□□□□□ -0.3
SMPD4-204ENST00000430682 STC2O76061 302 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 KAT7O95251 611 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 CD19P15391 556 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 ATP5C1P36542 298 aaKnown RBP13.16□□□□□ -0.3
SMPD4-204ENST00000430682 PPP1R2P41236 205 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 TKTL1P51854 596 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 SIM2Q14190 667 aaPredicted RBP13.16□□□□□ -0.3
SMPD4-204ENST00000430682 DMC1Q14565 340 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 PPP2R5DQ14738 602 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 FBXO43Q4G163 708 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 SGO2Q562F6 1265 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 C10orf120Q5SQS8 335 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 PM20D1Q6GTS8 502 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 TMEM270Q6UE05 265 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 TMEM92Q6UXU6 159 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 Q6ZNB5 142 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 PRR23BQ6ZRT6 265 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 SYT13Q7L8C5 426 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 PPM1KQ8N3J5 372 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 ZNF276Q8N554 614 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 TTC39CQ8N584 583 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 RMDN1Q96DB5 314 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 NT5C1BQ96P26 610 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 PNKPQ96T60 521 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 HINFPQ9BQA5 517 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 ULBP1Q9BZM6 244 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 FAM124BQ9H5Z6 455 aaPredicted RBP13.16□□□□□ -0.3
SMPD4-204ENST00000430682 SPHK2Q9NRA0 654 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 TBC1D14Q9P2M4 693 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 NCDNQ9UBB6 729 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 NCOR2Q9Y618 2525 aa13.16□□□□□ -0.3
SMPD4-204ENST00000430682 A0A0A0MRY4 1105 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 BICDL2A1A5D9 508 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 PIK3R2O00459 728 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 DCLK1O15075 740 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 ATG13O75143 517 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 TULP3O75386 442 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 ADH1CP00326 375 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 HMBSP08397 361 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 VDRP11473 427 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 BRD2P25440 801 aaKnown RBP13.15□□□□□ -0.3
SMPD4-204ENST00000430682 KIR2DL1P43626 348 aaPredicted RBP13.15□□□□□ -0.3
SMPD4-204ENST00000430682 ZNF132P52740 706 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 EFEMP1Q12805 493 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 GJB7Q6PEY0 223 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 KLHDC10Q6PID8 442 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 MIB1Q86YT6 1006 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 FAM160A2Q8N612 972 aaPredicted RBP13.15□□□□□ -0.3
SMPD4-204ENST00000430682 ALLCQ8N6M5 410 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 TRIML1Q8N9V2 468 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 OTUB2Q96DC9 234 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 NACA2Q9H009 215 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 INTS2Q9H0H0 1204 aaKnown RBP13.15□□□□□ -0.3
SMPD4-204ENST00000430682 CLIC5Q9NZA1 410 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 DNMT3LQ9UJW3 386 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 SLC8A2Q9UPR5 921 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 PCDHB4Q9Y5E5 795 aa13.15□□□□□ -0.3
SMPD4-204ENST00000430682 YJEFN3A6XGL0 299 aa13.14□□□□□ -0.31
SMPD4-204ENST00000430682 E7ENQ6 273 aa13.14□□□□□ -0.31
SMPD4-204ENST00000430682 SGK1O00141 431 aa13.14□□□□□ -0.31
SMPD4-204ENST00000430682 XPO1O14980 1071 aaKnown RBP13.14□□□□□ -0.31
SMPD4-204ENST00000430682 HOXC11O43248 304 aaPredicted RBP13.14□□□□□ -0.31
SMPD4-204ENST00000430682 ADAM23O75077 832 aa13.14□□□□□ -0.31
SMPD4-204ENST00000430682 AFPP02771 609 aaKnown RBP13.14□□□□□ -0.31
SMPD4-204ENST00000430682 TRIM21P19474 475 aaKnown RBP13.14□□□□□ -0.31
SMPD4-204ENST00000430682 TBXAS1P24557 533 aaPredicted RBP13.14□□□□□ -0.31
SMPD4-204ENST00000430682 TIE1P35590 1138 aa13.14□□□□□ -0.31
SMPD4-204ENST00000430682 EIF2DP41214 584 aaKnown RBP13.14□□□□□ -0.31
SMPD4-204ENST00000430682 PLA2G4AP47712 749 aa13.14□□□□□ -0.31
SMPD4-204ENST00000430682 RGS7P49802 495 aa13.14□□□□□ -0.31
SMPD4-204ENST00000430682 BCAT1P54687 386 aa13.14□□□□□ -0.31
SMPD4-204ENST00000430682 YWHAGP61981 247 aaKnown RBP eCLIP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms