RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 NCOR1O75376 2440 aa26.35■■□□□ 1.81
CPNE1-212ENST00000430570 TTC28Q96AY4 2481 aa26.35■■□□□ 1.81
CPNE1-212ENST00000430570 UNGP13051 313 aaPredicted RBP26.35■■□□□ 1.81
CPNE1-212ENST00000430570 PSMC3P17980 439 aa26.35■■□□□ 1.81
CPNE1-212ENST00000430570 ATP5C1P36542 298 aaKnown RBP26.35■■□□□ 1.81
CPNE1-212ENST00000430570 GOLGA8FQ08AF8 430 aa26.35■■□□□ 1.81
CPNE1-212ENST00000430570 GOLGA8DPQ0D2H9 430 aa26.35■■□□□ 1.81
CPNE1-212ENST00000430570 ZNF77Q15935 545 aa26.35■■□□□ 1.81
CPNE1-212ENST00000430570 ZNF571Q7Z3V5 609 aaPredicted RBP26.35■■□□□ 1.81
CPNE1-212ENST00000430570 ERICH1Q86X53 443 aa26.35■■□□□ 1.81
CPNE1-212ENST00000430570 TTC16Q8NEE8 873 aa26.35■■□□□ 1.81
CPNE1-212ENST00000430570 KIF9Q9HAQ2 790 aa26.35■■□□□ 1.81
CPNE1-212ENST00000430570 SEPT11Q9NVA2 429 aaKnown RBP26.35■■□□□ 1.81
CPNE1-212ENST00000430570 DUSP12Q9UNI6 340 aa26.35■■□□□ 1.81
CPNE1-212ENST00000430570 TNFRSF10AO00220 468 aa26.34■■□□□ 1.81
CPNE1-212ENST00000430570 LEFTY2O00292 366 aa26.34■■□□□ 1.81
CPNE1-212ENST00000430570 FYNP06241 537 aa26.34■■□□□ 1.81
CPNE1-212ENST00000430570 KLHL30Q0D2K2 578 aa26.34■■□□□ 1.81
CPNE1-212ENST00000430570 TAF5Q15542 800 aa26.34■■□□□ 1.81
CPNE1-212ENST00000430570 CLEC16AQ2KHT3 1053 aa26.34■■□□□ 1.81
CPNE1-212ENST00000430570 C10orf120Q5SQS8 335 aa26.34■■□□□ 1.81
CPNE1-212ENST00000430570 HGSNATQ68CP4 663 aa26.34■■□□□ 1.81
CPNE1-212ENST00000430570 OR6B2Q6IFH4 312 aa26.34■■□□□ 1.81
CPNE1-212ENST00000430570 TRIM72Q6ZMU5 477 aa26.34■■□□□ 1.81
CPNE1-212ENST00000430570 FAM183BPQ6ZVS7 135 aa26.34■■□□□ 1.81
CPNE1-212ENST00000430570 TMC6Q7Z403 805 aa26.34■■□□□ 1.81
CPNE1-212ENST00000430570 SLC30A5Q8TAD4 765 aa26.34■■□□□ 1.81
CPNE1-212ENST00000430570 DEPDC1BQ8WUY9 529 aa26.34■■□□□ 1.81
CPNE1-212ENST00000430570 SYN2Q92777 582 aaPredicted RBP26.34■■□□□ 1.81
CPNE1-212ENST00000430570 WBP2Q969T9 261 aa26.34■■□□□ 1.81
CPNE1-212ENST00000430570 TRMT61BQ9BVS5 477 aaKnown RBP26.34■■□□□ 1.81
CPNE1-212ENST00000430570 KLF16Q9BXK1 252 aaPredicted RBP26.34■■□□□ 1.81
CPNE1-212ENST00000430570 NACA2Q9H009 215 aa26.34■■□□□ 1.81
CPNE1-212ENST00000430570 NUCKS1Q9H1E3 243 aaKnown RBP26.34■■□□□ 1.81
CPNE1-212ENST00000430570 A0A0C4DFX4 3053 aa26.33■■□□□ 1.81
CPNE1-212ENST00000430570 HELZP42694 1942 aaKnown RBP26.33■■□□□ 1.81
CPNE1-212ENST00000430570 DCXO43602 365 aa26.33■■□□□ 1.81
CPNE1-212ENST00000430570 LTFP02788 710 aa26.33■■□□□ 1.81
CPNE1-212ENST00000430570 TNFAIP3P21580 790 aa26.33■■□□□ 1.81
CPNE1-212ENST00000430570 GDI1P31150 447 aa26.33■■□□□ 1.81
CPNE1-212ENST00000430570 GABRB2P47870 512 aa26.33■■□□□ 1.81
CPNE1-212ENST00000430570 ZXDAP98168 799 aa26.33■■□□□ 1.81
CPNE1-212ENST00000430570 FCHO2Q0JRZ9 810 aa26.33■■□□□ 1.81
CPNE1-212ENST00000430570 USP4Q13107 963 aa26.33■■□□□ 1.81
CPNE1-212ENST00000430570 KLHDC10Q6PID8 442 aa26.33■■□□□ 1.81
CPNE1-212ENST00000430570 IPO4Q8TEX9 1081 aaKnown RBP26.33■■□□□ 1.81
CPNE1-212ENST00000430570 ZFYVE19Q96K21 471 aa26.33■■□□□ 1.81
CPNE1-212ENST00000430570 SYNCQ9H7C4 482 aa26.33■■□□□ 1.81
CPNE1-212ENST00000430570 ABCC13Q9NSE7 274 aa26.33■■□□□ 1.81
CPNE1-212ENST00000430570 SRFP11831 508 aa26.32■■□□□ 1.8
CPNE1-212ENST00000430570 TCF3P15923 654 aa26.32■■□□□ 1.8
CPNE1-212ENST00000430570 EFEMP1Q12805 493 aa26.32■■□□□ 1.8
CPNE1-212ENST00000430570 TBX2Q13207 712 aaPredicted RBP26.32■■□□□ 1.8
CPNE1-212ENST00000430570 TRIM14Q14142 442 aa26.32■■□□□ 1.8
CPNE1-212ENST00000430570 FAM149B1Q96BN6 582 aa26.32■■□□□ 1.8
CPNE1-212ENST00000430570 C18orf8Q96DM3 657 aa26.32■■□□□ 1.8
CPNE1-212ENST00000430570 RASAL2Q9UJF2 1139 aa26.32■■□□□ 1.8
CPNE1-212ENST00000430570 DNMT3LQ9UJW3 386 aa26.32■■□□□ 1.8
CPNE1-212ENST00000430570 PI4K2BG5E9Z4 385 aa26.31■■□□□ 1.8
CPNE1-212ENST00000430570 SART1O43290 800 aaKnown RBP26.31■■□□□ 1.8
CPNE1-212ENST00000430570 MTF1Q14872 753 aa26.31■■□□□ 1.8
CPNE1-212ENST00000430570 IER5LQ5T953 404 aa26.31■■□□□ 1.8
CPNE1-212ENST00000430570 OLFML1Q6UWY5 402 aa26.31■■□□□ 1.8
CPNE1-212ENST00000430570 RSRC2Q7L4I2 434 aaKnown RBP26.31■■□□□ 1.8
CPNE1-212ENST00000430570 XYLT1Q86Y38 959 aa26.31■■□□□ 1.8
CPNE1-212ENST00000430570 YAF2Q8IY57 180 aa26.31■■□□□ 1.8
CPNE1-212ENST00000430570 ASIC4Q96FT7 647 aa26.31■■□□□ 1.8
CPNE1-212ENST00000430570 MRFAP1L1Q96HT8 127 aa26.31■■□□□ 1.8
CPNE1-212ENST00000430570 CFAP97Q9P2B7 532 aa26.31■■□□□ 1.8
CPNE1-212ENST00000430570 NAALADL1Q9UQQ1 740 aa26.31■■□□□ 1.8
CPNE1-212ENST00000430570 SCAMP3O14828 347 aaKnown RBP26.3■■□□□ 1.8
CPNE1-212ENST00000430570 ZNF263O14978 683 aa26.3■■□□□ 1.8
CPNE1-212ENST00000430570 PLEKP08567 350 aaPredicted RBP26.3■■□□□ 1.8
CPNE1-212ENST00000430570 ADKP55263 362 aaKnown RBP26.3■■□□□ 1.8
CPNE1-212ENST00000430570 SNX16P57768 344 aa26.3■■□□□ 1.8
CPNE1-212ENST00000430570 SLC6A3Q01959 620 aa26.3■■□□□ 1.8
CPNE1-212ENST00000430570 CENPCQ03188 943 aa26.3■■□□□ 1.8
CPNE1-212ENST00000430570 MMS22LQ6ZRQ5 1243 aa26.3■■□□□ 1.8
CPNE1-212ENST00000430570 PHLDB2Q86SQ0 1253 aa26.3■■□□□ 1.8
CPNE1-212ENST00000430570 TADA2BQ86TJ2 420 aa26.3■■□□□ 1.8
CPNE1-212ENST00000430570 MIB1Q86YT6 1006 aa26.3■■□□□ 1.8
CPNE1-212ENST00000430570 UBALD2Q8IYN6 164 aa26.3■■□□□ 1.8
CPNE1-212ENST00000430570 RNF139Q8WU17 664 aa26.3■■□□□ 1.8
CPNE1-212ENST00000430570 GOLGA1Q92805 767 aa26.3■■□□□ 1.8
CPNE1-212ENST00000430570 CDK5RAP1Q96SZ6 601 aaKnown RBP26.3■■□□□ 1.8
CPNE1-212ENST00000430570 C11orf70Q9BRQ4 267 aa26.3■■□□□ 1.8
CPNE1-212ENST00000430570 EPHX3Q9H6B9 360 aa26.3■■□□□ 1.8
CPNE1-212ENST00000430570 BRD9Q9H8M2 597 aa26.3■■□□□ 1.8
CPNE1-212ENST00000430570 SLC2A4RGQ9NR83 387 aa26.3■■□□□ 1.8
CPNE1-212ENST00000430570 TAS2R14Q9NYV8 317 aa26.3■■□□□ 1.8
CPNE1-212ENST00000430570 SFMBT1Q9UHJ3 866 aa26.3■■□□□ 1.8
CPNE1-212ENST00000430570 DDX3XO00571 662 aaKnown RBP eCLIP26.29■■□□□ 1.81e-13■■■□□ 15.3
CPNE1-212ENST00000430570 CHADO15335 359 aa26.29■■□□□ 1.8
CPNE1-212ENST00000430570 GRAP2O75791 330 aa26.29■■□□□ 1.8
CPNE1-212ENST00000430570 IRF1P10914 325 aa26.29■■□□□ 1.8
CPNE1-212ENST00000430570 MMP8P22894 467 aa26.29■■□□□ 1.8
CPNE1-212ENST00000430570 YWHAZP63104 245 aaKnown RBP26.29■■□□□ 1.8
CPNE1-212ENST00000430570 PTP4A2Q12974 167 aa26.29■■□□□ 1.8
CPNE1-212ENST00000430570 SYPL2Q5VXT5 272 aa26.29■■□□□ 1.8
CPNE1-212ENST00000430570 OR8K1Q8NGG5 319 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms