RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 CCP110O43303 1012 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 EPB41L2O43491 1005 aaKnown RBP3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 SNX2O60749 519 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 SKAP2O75563 359 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 RNASEH2AO75792 299 aaKnown RBP3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 MT-ND5P03915 603 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 POLBP06746 335 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 RHOP08100 348 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 ZFXP17010 805 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 SERPINF1P36955 418 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 PLA2G5P39877 138 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 DGKEP52429 567 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 MPP1Q00013 466 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 MYO1EQ12965 1108 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 PRKG1Q13976 671 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 TBCCQ15814 346 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 TIGD6Q17RP2 521 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 INSCQ1MX18 579 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 FAM153CQ494X1 144 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 PLA1AQ53H76 456 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 ARHGAP15Q53QZ3 475 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 GPATCH4Q5T3I0 446 aaKnown RBP3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 DCAF12L1Q5VU92 463 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 UNC13DQ70J99 1090 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 ZNF551Q7Z340 670 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 HEATR4Q86WZ0 1026 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 TMTC1Q8IUR5 882 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 TMTC2Q8N394 836 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 GLIS1Q8NBF1 620 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 STT3BQ8TCJ2 826 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 SMCR8Q8TEV9 937 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 IPCEF1Q8WWN9 437 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 TBATAQ96M53 351 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 UROC1Q96N76 676 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 NEUROD6Q96NK8 337 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 TIMP4Q99727 224 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 PAGR1Q9BTK6 254 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 PRDM13Q9H4Q3 707 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 GLOD4Q9HC38 313 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 XPNPEP3Q9NQH7 507 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 RNF7Q9UBF6 113 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 FRMD4BQ9Y2L6 1034 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 ENTPD2Q9Y5L3 495 aa3.45□□□□□ -1.86
HMGB1P9-201ENST00000429856 LOC102723971A0A1B0GUV8 181 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 GOLGA6L3A6NEY3 463 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 LINC00473A8K010 186 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 INMTO95050 263 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 ANXA2P07355 339 aaKnown RBP3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 NR2F6P10588 404 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 MYL4P12829 197 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 JUPP14923 745 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 WT1P19544 449 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 GABRB3P28472 473 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 MAN1A1P33908 653 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 TUBP50607 506 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 PNLIPRP1P54315 467 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 PRKAG1P54619 331 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 EIF2B5Q13144 721 aaKnown RBP3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 DDX10Q13206 875 aaKnown RBP3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 G3BP1Q13283 466 aaKnown RBP eCLIP3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 SPARCL1Q14515 664 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 TOMM20Q15388 145 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 RAB30Q15771 203 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 GPR162Q16538 588 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 CERCAMQ5T4B2 595 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 SULT6B1Q6IMI4 303 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 ANKRD16Q6P6B7 361 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 USP49Q70CQ1 688 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 ZNF804AQ7Z570 1209 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 WDR53Q7Z5U6 358 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 TBC1D1Q86TI0 1168 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 CPOQ8IVL8 374 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 SDR16C5Q8N3Y7 309 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 C9orf106Q8NAJ2 232 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 FANCBQ8NB91 859 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 OSCP1Q8WVF1 389 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 ATG4AQ8WYN0 398 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 RAPGEF4Q8WZA2 1011 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 RFKQ969G6 155 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 IQCDQ96DY2 449 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 LRRC46Q96FV0 321 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 PPM1MQ96MI6 270 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 CENPOQ9BU64 300 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 OSBPL5Q9H0X9 879 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 DHX36Q9H2U1 1008 aaKnown RBP3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 CXorf36Q9H7Y0 433 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 MLXIPQ9HAP2 919 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 ALG13Q9NP73 1137 aaKnown RBP3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 SERHLQ9NQF3 203 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 ARHGEF3Q9NR81 526 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 SSX2IPQ9Y2D8 614 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 CEP83Q9Y592 693 aa3.44□□□□□ -1.86
HMGB1P9-201ENST00000429856 VWC2LB2RUY7 222 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 PODXLO00592 558 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 PIP5K1BO14986 540 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 ASNA1O43681 348 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 PROP1O75360 226 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 RASSF9O75901 435 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 MBD4O95243 580 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms