RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 LCA5Q86VQ0 697 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 NMUR2Q9GZQ4 415 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 LAMB4A4D0S4 1761 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 ARHGAP10A1A4S6 786 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 WDR27A2RRH5 827 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 EEF2KO00418 725 aaKnown RBP13.06□□□□□ -0.32
CPNE4-201ENST00000429747 IREB2P48200 963 aaKnown RBP13.06□□□□□ -0.32
CPNE4-201ENST00000429747 PDCD2Q16342 344 aaPredicted RBP13.06□□□□□ -0.32
CPNE4-201ENST00000429747 FNBP1LQ5T0N5 605 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 APOBEC3FQ8IUX4 373 aaKnown RBP13.06□□□□□ -0.32
CPNE4-201ENST00000429747 RNF148Q8N7C7 305 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 CHST13Q8NET6 341 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 ZNF398Q8TD17 642 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 CNBD2Q96M20 576 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 VPS33BQ9H267 617 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 THAP1Q9NVV9 213 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 IRAK4Q9NWZ3 460 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 DFFAO00273 331 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 GSC2O15499 205 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 HBP1O60381 514 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 FKBP6O75344 327 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 NPM3O75607 178 aaKnown RBP13.06□□□□□ -0.32
CPNE4-201ENST00000429747 FAM155BO75949 473 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 CPA3P15088 417 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 TGM2P21980 687 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 PTGER2P43116 358 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 SLC1A6P48664 564 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 CCDC15Q0P6D6 951 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 PDPK2PQ6A1A2 396 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.06□□□□□ -0.32
CPNE4-201ENST00000429747 LMO3Q8TAP4 145 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 CPT1BQ92523 772 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 NMD3Q96D46 503 aaKnown RBP13.06□□□□□ -0.32
CPNE4-201ENST00000429747 ST6GALNAC4Q9H4F1 302 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 KCNK4Q9NYG8 393 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 PACSIN3Q9UKS6 424 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 COQ4Q9Y3A0 265 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 DCXO43602 365 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 MOCS2O96007 188 aaPredicted RBP13.06□□□□□ -0.32
CPNE4-201ENST00000429747 ASS1P00966 412 aaKnown RBP13.06□□□□□ -0.32
CPNE4-201ENST00000429747 TCF4P15884 667 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 ACVR2BQ13705 512 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 PTPN20Q4JDL3 420 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 IYDQ6PHW0 289 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 TNIP3Q96KP6 325 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 APOBEC3GQ9HC16 384 aaKnown RBP13.06□□□□□ -0.32
CPNE4-201ENST00000429747 GGA3Q9NZ52 723 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 ZNF212Q9UDV6 495 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 DCDC2Q9UHG0 476 aa13.06□□□□□ -0.32
CPNE4-201ENST00000429747 MYPNQ86TC9 1320 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 SEC24DO94855 1032 aaPredicted RBP13.05□□□□□ -0.32
CPNE4-201ENST00000429747 SNUPNO95149 360 aaKnown RBP13.05□□□□□ -0.32
CPNE4-201ENST00000429747 C4BPAP04003 597 aaKnown RBP13.05□□□□□ -0.32
CPNE4-201ENST00000429747 ABCG1P45844 678 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 TGFB2P61812 414 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 KHDC1Q4VXA5 237 aaKnown RBP13.05□□□□□ -0.32
CPNE4-201ENST00000429747 TMEM259Q4ZIN3 620 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 RNASEH2BQ5TBB1 312 aaKnown RBP13.05□□□□□ -0.32
CPNE4-201ENST00000429747 KCNT2Q6UVM3 1135 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 C4orf22Q6V702 233 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 ILKAPQ9H0C8 392 aaPredicted RBP13.05□□□□□ -0.32
CPNE4-201ENST00000429747 AURKCQ9UQB9 309 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 KIF13AQ9H1H9 1805 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 A0A087WZ62 844 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 VTNP04004 478 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 CETPP11597 493 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 PAMP19021 973 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 AMPD1P23109 780 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 SOX11P35716 441 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 CDKN2BP42772 138 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 TBL3Q12788 808 aaKnown RBP13.05□□□□□ -0.32
CPNE4-201ENST00000429747 CAPSQ13938 189 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 TAF12Q16514 161 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 C16orf89Q6UX73 402 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 C4orf50Q6ZRC1 276 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 RIPOR1Q6ZS17 1223 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 MYLK4Q86YV6 388 aaPredicted RBP13.05□□□□□ -0.32
CPNE4-201ENST00000429747 EFCAB3Q8N7B9 438 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 COLGALT1Q8NBJ5 622 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 SLC7A14Q8TBB6 771 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 FDXACB1Q9BRP7 624 aaPredicted RBP13.05□□□□□ -0.32
CPNE4-201ENST00000429747 RIPK3Q9Y572 518 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 CCNHP51946 323 aaPredicted RBP13.05□□□□□ -0.32
CPNE4-201ENST00000429747 OLFML2BQ68BL8 750 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 STRA8Q7Z7C7 330 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 ELP3Q9H9T3 547 aa13.05□□□□□ -0.32
CPNE4-201ENST00000429747 PIN4Q9Y237 131 aaKnown RBP13.05□□□□□ -0.32
CPNE4-201ENST00000429747 SLIT2O94813 1529 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 C3orf70A6NLC5 250 aaPredicted RBP13.04□□□□□ -0.32
CPNE4-201ENST00000429747 ZMPSTE24O75844 475 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 WFS1O76024 890 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 CYP1A1P04798 512 aaPredicted RBP13.04□□□□□ -0.32
CPNE4-201ENST00000429747 CD48P09326 243 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 MGAT1P26572 445 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 RXRBP28702 533 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 PMLP29590 882 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 AVPR1AP37288 418 aa13.04□□□□□ -0.32
CPNE4-201ENST00000429747 UBAP2LQ14157 1087 aaKnown RBP13.04□□□□□ -0.32
CPNE4-201ENST00000429747 APLFQ8IW19 511 aaPredicted RBP13.04□□□□□ -0.32
CPNE4-201ENST00000429747 RNF139Q8WU17 664 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms