RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 MYOCOSA0A1B0GUC4 107 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 A6NL46 340 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 B4E1Z4 1266 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 H7C0C1 242 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 J3QRK9 145 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 TM9SF1O15321 606 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 DCKP27707 260 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 PEX3P56589 373 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 PHC1P78364 1004 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 ARID5AQ03989 594 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 GALNT2Q10471 571 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 OVGP1Q12889 678 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 IKQ13123 557 aaPredicted RBP9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 SMU1Q2TAY7 513 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 LRRC55Q6ZSA7 311 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 GLRX5Q86SX6 157 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 NOP9Q86U38 636 aaKnown RBP9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 CHERPQ8IWX8 916 aaKnown RBP9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 GUF1Q8N442 669 aaKnown RBP9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 RFFLQ8WZ73 363 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 FBXL8Q96CD0 374 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 ACAP3Q96P50 834 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 NACC1Q96RE7 527 aa9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 UBA2Q9UBT2 640 aaPredicted RBP9.19□□□□□ -0.94
CDC42BPA-206ENST00000429440 MROH5Q6ZUA9 1318 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 ARHGAP42A6NI28 874 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 H3BMQ9 156 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 RNF103O00237 685 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 DYNC1LI2O43237 492 aaPredicted RBP9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 SH3BP5O60239 455 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZC3H11AO75152 810 aaKnown RBP eCLIP9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 NTSR2O95665 410 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 MYL2P10916 166 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 NR4A1P22736 598 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 POLR2BP30876 1174 aaKnown RBP9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 NDST2P52849 883 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 MLLT6P55198 1093 aaPredicted RBP9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 FCHO2Q0JRZ9 810 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 GK3PQ14409 553 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 STK11Q15831 433 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 CCNJQ5T5M9 372 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 RNF19BQ6ZMZ0 732 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 SETD3Q86TU7 594 aaPredicted RBP9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 LARGE2Q8N3Y3 721 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 KCTD17Q8N5Z5 321 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 FAM20AQ96MK3 541 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 COG8Q96MW5 612 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZNF347Q96SE7 839 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 FRMD8Q9BZ67 464 aaPredicted RBP9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 GCOM2Q9BZD3 368 aaPredicted RBP9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 GANQ9H2C0 597 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 IFT122Q9HBG6 1241 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 AVENQ9NQS1 362 aaPredicted RBP9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 ARMCX1Q9P291 453 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 SLC8A2Q9UPR5 921 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 DNM3Q9UQ16 869 aa9.18□□□□□ -0.94
CDC42BPA-206ENST00000429440 A0A087WXM4 84 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 LOC102724428A0A0B4J2F2 783 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 WDR91A4D1P6 747 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 GCATO75600 419 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 PLCG1P19174 1290 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 GABRB3P28472 473 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 NMT1P30419 496 aaKnown RBP9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 SIK1P57059 783 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 MRPS9P82933 396 aaKnown RBP9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 CTBSQ01459 385 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 PRKCEQ02156 737 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZNF618Q5T7W0 954 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 ATAD3BQ5T9A4 648 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 PRR23CQ6ZRP0 262 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 AKAP14Q86UN6 197 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 KIAA0895Q8NCT3 520 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 SLC16A10Q8TF71 515 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 NLRP7Q8WX94 980 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 TANKQ92844 425 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 GLMNQ92990 594 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 METTL2AQ96IZ6 378 aaKnown RBP9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 FOXP3Q9BZS1 431 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 NEK6Q9HC98 313 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 TRAF6Q9Y4K3 522 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 SLC4A4Q9Y6R1 1079 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 RTL9Q8NET4 1388 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 LTBP4Q8N2S1 1624 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 C10orf71Q711Q0 1435 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 ESYT2A0FGR8 921 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 TSPY2A6NKD2 308 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 CCRL2O00421 344 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 GIPC1O14908 333 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 SORBS3O60504 671 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 JRKO75564 520 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 GSTM1P09488 218 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 UQCRFS1P1P0C7P4 283 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 TSPY3P0CV98 308 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 TSPY8P0CW00 308 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 CALM1P0DP23 149 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 CALM2P0DP24 149 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 CALM3P0DP25 149 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 KRT3P12035 628 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 CHRNB2P17787 502 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms