RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 DKC1O60832 514 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDH3-202ENST00000429102 SNRPAP09012 282 aaKnown RBP12.95□□□□□ -0.34
CDH3-202ENST00000429102 DPEP1P16444 411 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 SLC25A11Q02978 314 aaKnown RBP12.95□□□□□ -0.34
CDH3-202ENST00000429102 GBE1Q04446 702 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 EN1Q05925 392 aaPredicted RBP12.95□□□□□ -0.34
CDH3-202ENST00000429102 ASPHQ12797 758 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 NME8Q8N427 588 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 FAM149B1Q96BN6 582 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 VCPIP1Q96JH7 1222 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 MRPL4Q9BYD3 311 aaKnown RBP12.95□□□□□ -0.34
CDH3-202ENST00000429102 MYH9P35579 1960 aaKnown RBP12.95□□□□□ -0.34
CDH3-202ENST00000429102 A6NHS1 94 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 PGM3O95394 542 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 LCP1P13796 627 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 YWHAEP62258 255 aaKnown RBP12.95□□□□□ -0.34
CDH3-202ENST00000429102 USP4Q13107 963 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 HSDL1Q3SXM5 330 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 ACOT1Q86TX2 421 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 SLC26A11Q86WA9 606 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 AZIN2Q96A70 460 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 TUBGCP5Q96RT8 1024 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 TMPRSS4Q9NRS4 437 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 SLC7A8Q9UHI5 535 aa12.95□□□□□ -0.34
CDH3-202ENST00000429102 MYOCOSA0A1B0GUC4 107 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 WDR27A2RRH5 827 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 METTL18O95568 372 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 NAMPTP43490 491 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 LAMTOR4Q0VGL1 99 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 CUL3Q13618 768 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 PRKD1Q15139 912 aaPredicted RBP12.94□□□□□ -0.34
CDH3-202ENST00000429102 BBS12Q6ZW61 710 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 NIPA1Q7RTP0 329 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 ZBTB8OSQ8IWT0 167 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 ULK2Q8IYT8 1036 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 PANX3Q96QZ0 392 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 RPF1Q9H9Y2 349 aaKnown RBP12.94□□□□□ -0.34
CDH3-202ENST00000429102 KRT82Q9NSB4 513 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 NRBP2Q9NSY0 501 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 NRAPQ86VF7 1730 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 ADCY3O60266 1144 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 ADORA2BP29275 332 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 MLH1P40692 756 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 YWHAZP63104 245 aaKnown RBP12.94□□□□□ -0.34
CDH3-202ENST00000429102 TRIP10Q15642 601 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 RAPH1Q70E73 1250 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 CMC1Q7Z7K0 106 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 TDRPQ86YL5 185 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 PIP4K2CQ8TBX8 421 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 FAM172AQ8WUF8 416 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 LPAR1Q92633 364 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 GPRASP2Q96D09 838 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 NMD3Q96D46 503 aaKnown RBP12.94□□□□□ -0.34
CDH3-202ENST00000429102 PTCD3Q96EY7 689 aaKnown RBP12.94□□□□□ -0.34
CDH3-202ENST00000429102 PHACTR1Q9C0D0 580 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 ELOVL4Q9GZR5 314 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 MINDY3Q9H8M7 445 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 C17orf75Q9HAS0 396 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 TXNDC16Q9P2K2 825 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 HACL1Q9UJ83 578 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 BRCA2P51587 3418 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 PMM2O15305 246 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 TM9SF1O15321 606 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 TRPA1O75762 1119 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 ATP6V1B1P15313 513 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 FASTKD1Q53R41 847 aaKnown RBP12.94□□□□□ -0.34
CDH3-202ENST00000429102 TTC39BQ5VTQ0 682 aaPredicted RBP12.94□□□□□ -0.34
CDH3-202ENST00000429102 NXNQ6DKJ4 435 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 XYLT1Q86Y38 959 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 ZNF276Q8N554 614 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 CLEC4CQ8WTT0 213 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 SLC44A1Q8WWI5 657 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 MARK4Q96L34 752 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 ZNF184Q99676 751 aaPredicted RBP12.94□□□□□ -0.34
CDH3-202ENST00000429102 SH3GL3Q99963 347 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 FOXP3Q9BZS1 431 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 ACAD9Q9H845 621 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 CYLDQ9NQC7 956 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 LRCH1Q9Y2L9 728 aa12.94□□□□□ -0.34
CDH3-202ENST00000429102 C3orf70A6NLC5 250 aaPredicted RBP12.93□□□□□ -0.34
CDH3-202ENST00000429102 SIGLEC16A6NMB1 481 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 AIM2O14862 343 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 TRUB2O95900 331 aaKnown RBP12.93□□□□□ -0.34
CDH3-202ENST00000429102 ANPEPP15144 967 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 CD1EP15812 388 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 UBA1P22314 1058 aaKnown RBP12.93□□□□□ -0.34
CDH3-202ENST00000429102 BACE1P56817 501 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 PTPN11Q06124 597 aaPredicted RBP12.93□□□□□ -0.34
CDH3-202ENST00000429102 ILDR2Q71H61 639 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 KDELC2Q7Z4H8 507 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 BRSK2Q8IWQ3 736 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 PYROXD2Q8N2H3 581 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 TTC13Q8NBP0 860 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 EBF3Q9H4W6 596 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 SAR1AQ9NR31 198 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 APOC4-APOC2K7ER74 178 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 CREB3O43889 395 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 APOC2P02655 101 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 VTNP04004 478 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 N4BP2L1Q5TBK1 243 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms