RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 HDAC4P56524 1084 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 WDR4P57081 412 aaKnown RBP14.24□□□□□ -0.13
THBS3-202ENST00000428962 SLC8A3P57103 927 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 XRCC4Q13426 336 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 DPYSL2Q16555 572 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 PDK4Q16654 411 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 SPRED3Q2MJR0 410 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 RAB6CQ53S08 254 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 XKR4Q5GH76 650 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 HHATQ5VTY9 493 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 TAB3Q8N5C8 712 aaPredicted RBP14.24□□□□□ -0.13
THBS3-202ENST00000428962 PQLC3Q8N755 202 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 C7orf31Q8N865 590 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 KBTBD7Q8WVZ9 684 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 DNAJB3Q8WWF6 145 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 KHSRPQ92945 711 aaKnown RBP eCLIP14.24□□□□□ -0.13
THBS3-202ENST00000428962 HHIPL1Q96JK4 782 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 RAB6CQ9H0N0 254 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 DPEP3Q9H4B8 488 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 PRDM16Q9HAZ2 1276 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 GPATCH2LQ9NWQ4 482 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 KLHL14Q9P2G3 628 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 NME7Q9Y5B8 376 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 HEY1Q9Y5J3 304 aa14.24□□□□□ -0.13
THBS3-202ENST00000428962 IQANK1A0A1B0GTG1 560 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 CFAP73A6NFT4 308 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 HAS3O00219 553 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 TYROBPO43914 113 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 HUS1O60921 280 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 RASSF9O75901 435 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 HSPA1AP0DMV8 641 aaKnown RBP14.23□□□□□ -0.13
THBS3-202ENST00000428962 HSPA1BP0DMV9 641 aaKnown RBP14.23□□□□□ -0.13
THBS3-202ENST00000428962 GNAT1P11488 350 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 CCDC130P13994 396 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 IL4RP24394 825 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 CYP2F1P24903 491 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 HNRNPH1P31943 449 aaKnown RBP14.23□□□□□ -0.13
THBS3-202ENST00000428962 ELK3P41970 407 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 NR2C2P49116 596 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 CRYBB1P53674 252 aaPredicted RBP14.23□□□□□ -0.13
THBS3-202ENST00000428962 ADAM17P78536 824 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 SEPT7Q16181 437 aaKnown RBP14.23□□□□□ -0.13
THBS3-202ENST00000428962 EFHC1Q5JVL4 640 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 RNF43Q68DV7 783 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 SUGP1Q8IWZ8 645 aaKnown RBP14.23□□□□□ -0.13
THBS3-202ENST00000428962 C4orf33Q8N1A6 199 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 NME8Q8N427 588 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 PCDH19Q8TAB3 1148 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 LRRC8CQ8TDW0 803 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 CENPIQ92674 756 aaPredicted RBP14.23□□□□□ -0.13
THBS3-202ENST00000428962 MRRFQ96E11 262 aaKnown RBP14.23□□□□□ -0.13
THBS3-202ENST00000428962 PTPN18Q99952 460 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 WDR83Q9BRX9 315 aaKnown RBP14.23□□□□□ -0.13
THBS3-202ENST00000428962 C11orf84Q9BUA3 381 aaPredicted RBP14.23□□□□□ -0.13
THBS3-202ENST00000428962 AP5M1Q9H0R1 490 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 NRDE2Q9H7Z3 1164 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 USP29Q9HBJ7 922 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 RAB6BQ9NRW1 208 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 CHMP2BQ9UQN3 213 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 Q9Y3F1 56 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 STARD13Q9Y3M8 1113 aa14.23□□□□□ -0.13
THBS3-202ENST00000428962 C17orf102A2RUQ5 167 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 TM9SF1O15321 606 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 MYL3P08590 195 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 KRT4P19013 534 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 FOXN2P32314 431 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 MAGEA6P43360 314 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 EFTUD2Q15029 972 aaKnown RBP eCLIP14.22□□□□□ -0.13
THBS3-202ENST00000428962 PPP6R3Q5H9R7 873 aaPredicted RBP14.22□□□□□ -0.13
THBS3-202ENST00000428962 STRADAQ7RTN6 431 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 ADGRF2Q8IZF7 708 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 TOP6BLQ8N6T0 577 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 DCAKDQ8WVC6 231 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 CAPNS2Q96L46 248 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 B3GNT5Q9BYG0 378 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 KIF9Q9HAQ2 790 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 RXFP1Q9HBX9 757 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 PNPLA8Q9NP80 782 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 ABCF3Q9NUQ8 709 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.22□□□□□ -0.13
THBS3-202ENST00000428962 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.22□□□□□ -0.13
THBS3-202ENST00000428962 PRKAG3Q9UGI9 489 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 AP4E1Q9UPM8 1137 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 TEX264Q9Y6I9 313 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 XPO1O14980 1071 aaKnown RBP14.22□□□□□ -0.13
THBS3-202ENST00000428962 GABBR2O75899 941 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 GSTA2P09210 222 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 PDGFRBP09619 1106 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 FAM163BP0C2L3 166 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 ZNF865P0CJ78 1059 aaPredicted RBP14.22□□□□□ -0.13
THBS3-202ENST00000428962 LCP1P13796 627 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 WARSP23381 471 aaKnown RBP14.22□□□□□ -0.13
THBS3-202ENST00000428962 RBL1P28749 1068 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 RPA3P35244 121 aaPredicted RBP14.22□□□□□ -0.13
THBS3-202ENST00000428962 YWHAGP61981 247 aaKnown RBP eCLIP14.22□□□□□ -0.13
THBS3-202ENST00000428962 ZNF200P98182 395 aaPredicted RBP14.22□□□□□ -0.13
THBS3-202ENST00000428962 SF3A3Q12874 501 aaKnown RBP eCLIP14.22□□□□□ -0.13
THBS3-202ENST00000428962 CA9Q16790 459 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 PRAMEF19Q5SWL8 479 aa14.22□□□□□ -0.13
THBS3-202ENST00000428962 UBXN11Q5T124 520 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms