RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 TDGQ13569 410 aa23.4■■□□□ 1.34
PTPN18-205ENST00000428843 GRM2Q14416 872 aa23.4■■□□□ 1.34
PTPN18-205ENST00000428843 C10orf120Q5SQS8 335 aa23.4■■□□□ 1.34
PTPN18-205ENST00000428843 BTBD8Q5XKL5 378 aa23.4■■□□□ 1.34
PTPN18-205ENST00000428843 OR6B2Q6IFH4 312 aa23.4■■□□□ 1.34
PTPN18-205ENST00000428843 FAM183BPQ6ZVS7 135 aa23.4■■□□□ 1.34
PTPN18-205ENST00000428843 SLC30A5Q8TAD4 765 aa23.4■■□□□ 1.34
PTPN18-205ENST00000428843 LRRC3BQ96PB8 259 aa23.4■■□□□ 1.34
PTPN18-205ENST00000428843 COL25A1Q9BXS0 654 aaPredicted RBP23.4■■□□□ 1.34
PTPN18-205ENST00000428843 NACA2Q9H009 215 aa23.4■■□□□ 1.34
PTPN18-205ENST00000428843 SORCS3Q9UPU3 1222 aa23.4■■□□□ 1.34
PTPN18-205ENST00000428843 CPQQ9Y646 472 aa23.4■■□□□ 1.34
PTPN18-205ENST00000428843 VCANP13611 3396 aa23.4■■□□□ 1.34
PTPN18-205ENST00000428843 MDM4O15151 490 aa23.39■■□□□ 1.33
PTPN18-205ENST00000428843 SART1O43290 800 aaKnown RBP23.39■■□□□ 1.33
PTPN18-205ENST00000428843 GABRB2P47870 512 aa23.39■■□□□ 1.33
PTPN18-205ENST00000428843 ZXDBP98169 803 aa23.39■■□□□ 1.33
PTPN18-205ENST00000428843 TDRD12Q587J7 1177 aaKnown RBP23.39■■□□□ 1.33
PTPN18-205ENST00000428843 HGSNATQ68CP4 663 aa23.39■■□□□ 1.33
PTPN18-205ENST00000428843 KLHDC10Q6PID8 442 aa23.39■■□□□ 1.33
PTPN18-205ENST00000428843 TADA2BQ86TJ2 420 aa23.39■■□□□ 1.33
PTPN18-205ENST00000428843 MFSD6LQ8IWD5 586 aa23.39■■□□□ 1.33
PTPN18-205ENST00000428843 MSANTD4Q8NCY6 345 aa23.39■■□□□ 1.33
PTPN18-205ENST00000428843 RIN3Q8TB24 985 aa23.39■■□□□ 1.33
PTPN18-205ENST00000428843 EDEM1Q92611 657 aa23.39■■□□□ 1.33
PTPN18-205ENST00000428843 GOLGA1Q92805 767 aa23.39■■□□□ 1.33
PTPN18-205ENST00000428843 C18orf8Q96DM3 657 aa23.39■■□□□ 1.33
PTPN18-205ENST00000428843 PIWIL1Q96J94 861 aaKnown RBP23.39■■□□□ 1.33
PTPN18-205ENST00000428843 CDK5RAP1Q96SZ6 601 aaKnown RBP23.39■■□□□ 1.33
PTPN18-205ENST00000428843 SMOC2Q9H3U7 446 aa23.39■■□□□ 1.33
PTPN18-205ENST00000428843 ABCC13Q9NSE7 274 aa23.39■■□□□ 1.33
PTPN18-205ENST00000428843 SMPD4Q9NXE4 827 aa23.39■■□□□ 1.33
PTPN18-205ENST00000428843 MFAP3LO75121 409 aa23.38■■□□□ 1.33
PTPN18-205ENST00000428843 SERPING1P05155 500 aa23.38■■□□□ 1.33
PTPN18-205ENST00000428843 ADKP55263 362 aaKnown RBP23.38■■□□□ 1.33
PTPN18-205ENST00000428843 CENPCQ03188 943 aa23.38■■□□□ 1.33
PTPN18-205ENST00000428843 USP4Q13107 963 aa23.38■■□□□ 1.33
PTPN18-205ENST00000428843 ARID5BQ14865 1188 aa23.38■■□□□ 1.33
PTPN18-205ENST00000428843 ZNF77Q15935 545 aa23.38■■□□□ 1.33
PTPN18-205ENST00000428843 C2CD6Q53TS8 623 aa23.38■■□□□ 1.33
PTPN18-205ENST00000428843 OLFML1Q6UWY5 402 aa23.38■■□□□ 1.33
PTPN18-205ENST00000428843 RSRC2Q7L4I2 434 aaKnown RBP23.38■■□□□ 1.33
PTPN18-205ENST00000428843 TTC16Q8NEE8 873 aa23.38■■□□□ 1.33
PTPN18-205ENST00000428843 OR8K1Q8NGG5 319 aa23.38■■□□□ 1.33
PTPN18-205ENST00000428843 BPIFB1Q8TDL5 484 aa23.38■■□□□ 1.33
PTPN18-205ENST00000428843 SH3RF2Q8TEC5 729 aa23.38■■□□□ 1.33
PTPN18-205ENST00000428843 DEPDC1BQ8WUY9 529 aa23.38■■□□□ 1.33
PTPN18-205ENST00000428843 FAM149B1Q96BN6 582 aa23.38■■□□□ 1.33
PTPN18-205ENST00000428843 ZFRQ96KR1 1074 aaKnown RBP23.38■■□□□ 1.33
PTPN18-205ENST00000428843 DNAJC7Q99615 494 aa23.38■■□□□ 1.33
PTPN18-205ENST00000428843 DNMT3LQ9UJW3 386 aa23.38■■□□□ 1.33
PTPN18-205ENST00000428843 BZW2Q9Y6E2 419 aaKnown RBP23.38■■□□□ 1.33
PTPN18-205ENST00000428843 KIF26AQ9ULI4 1882 aaPredicted RBP23.37■■□□□ 1.33
PTPN18-205ENST00000428843 LEFTY2O00292 366 aa23.37■■□□□ 1.33
PTPN18-205ENST00000428843 NARSO43776 548 aaKnown RBP23.37■■□□□ 1.33
PTPN18-205ENST00000428843 TCF3P15923 654 aa23.37■■□□□ 1.33
PTPN18-205ENST00000428843 PSMC3P17980 439 aa23.37■■□□□ 1.33
PTPN18-205ENST00000428843 MMP8P22894 467 aa23.37■■□□□ 1.33
PTPN18-205ENST00000428843 HNRNPH3P31942 346 aaKnown RBP23.37■■□□□ 1.33
PTPN18-205ENST00000428843 MMS22LQ6ZRQ5 1243 aa23.37■■□□□ 1.33
PTPN18-205ENST00000428843 XYLT1Q86Y38 959 aa23.37■■□□□ 1.33
PTPN18-205ENST00000428843 RNF139Q8WU17 664 aa23.37■■□□□ 1.33
PTPN18-205ENST00000428843 KHSRPQ92945 711 aaKnown RBP eCLIP23.37■■□□□ 1.332e-6■■■□□ 18.1
PTPN18-205ENST00000428843 TRMT61BQ9BVS5 477 aaKnown RBP23.37■■□□□ 1.33
PTPN18-205ENST00000428843 KLF16Q9BXK1 252 aaPredicted RBP23.37■■□□□ 1.33
PTPN18-205ENST00000428843 OLA1Q9NTK5 396 aaKnown RBP23.37■■□□□ 1.33
PTPN18-205ENST00000428843 RASAL2Q9UJF2 1139 aa23.37■■□□□ 1.33
PTPN18-205ENST00000428843 AKR1B15C9JRZ8 316 aaPredicted RBP23.36■■□□□ 1.33
PTPN18-205ENST00000428843 DDX3XO00571 662 aaKnown RBP eCLIP23.36■■□□□ 1.333e-7■■■□□ 17.3
PTPN18-205ENST00000428843 FYNP06241 537 aa23.36■■□□□ 1.33
PTPN18-205ENST00000428843 PLEKP08567 350 aaPredicted RBP23.36■■□□□ 1.33
PTPN18-205ENST00000428843 NSFP46459 744 aaKnown RBP23.36■■□□□ 1.33
PTPN18-205ENST00000428843 SLC6A3Q01959 620 aa23.36■■□□□ 1.33
PTPN18-205ENST00000428843 EFEMP1Q12805 493 aa23.36■■□□□ 1.33
PTPN18-205ENST00000428843 TAF5Q15542 800 aa23.36■■□□□ 1.33
PTPN18-205ENST00000428843 PHF13Q86YI8 300 aaPredicted RBP23.36■■□□□ 1.33
PTPN18-205ENST00000428843 ZDHHC17Q8IUH5 632 aa23.36■■□□□ 1.33
PTPN18-205ENST00000428843 YAF2Q8IY57 180 aa23.36■■□□□ 1.33
PTPN18-205ENST00000428843 C11orf70Q9BRQ4 267 aa23.36■■□□□ 1.33
PTPN18-205ENST00000428843 GKN1Q9NS71 199 aa23.36■■□□□ 1.33
PTPN18-205ENST00000428843 ABHD10Q9NUJ1 306 aa23.36■■□□□ 1.33
PTPN18-205ENST00000428843 DUSP12Q9UNI6 340 aa23.36■■□□□ 1.33
PTPN18-205ENST00000428843 ADCY5O95622 1261 aa23.35■■□□□ 1.33
PTPN18-205ENST00000428843 NCAM1P13591 858 aa23.35■■□□□ 1.33
PTPN18-205ENST00000428843 GDI1P31150 447 aa23.35■■□□□ 1.33
PTPN18-205ENST00000428843 YWHAZP63104 245 aaKnown RBP23.35■■□□□ 1.33
PTPN18-205ENST00000428843 GPC5P78333 572 aa23.35■■□□□ 1.33
PTPN18-205ENST00000428843 FCHO2Q0JRZ9 810 aa23.35■■□□□ 1.33
PTPN18-205ENST00000428843 PTP4A2Q12974 167 aa23.35■■□□□ 1.33
PTPN18-205ENST00000428843 EFHC1Q5JVL4 640 aa23.35■■□□□ 1.33
PTPN18-205ENST00000428843 ACAD10Q6JQN1 1059 aa23.35■■□□□ 1.33
PTPN18-205ENST00000428843 WDR59Q6PJI9 974 aa23.35■■□□□ 1.33
PTPN18-205ENST00000428843 TOGARAM2Q6ZUX3 1019 aa23.35■■□□□ 1.33
PTPN18-205ENST00000428843 DDX42Q86XP3 938 aaKnown RBP eCLIP23.35■■□□□ 1.33
PTPN18-205ENST00000428843 MIB1Q86YT6 1006 aa23.35■■□□□ 1.33
PTPN18-205ENST00000428843 CNGA4Q8IV77 575 aa23.35■■□□□ 1.33
PTPN18-205ENST00000428843 TRIM62Q9BVG3 475 aa23.35■■□□□ 1.33
PTPN18-205ENST00000428843 POPDC2Q9HBU9 364 aa23.35■■□□□ 1.33
PTPN18-205ENST00000428843 ASNSD1Q9NWL6 643 aa23.35■■□□□ 1.33
PTPN18-205ENST00000428843 TAS2R14Q9NYV8 317 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms