RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 SNX30Q5VWJ9 437 aa19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 SCARA5Q6ZMJ2 495 aa19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 EPM2AIP1Q7L775 607 aaPredicted RBP19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 SLC41A1Q8IVJ1 513 aa19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 TRIML1Q8N9V2 468 aa19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 ZNF507Q8TCN5 953 aa19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 ZNF516Q92618 1163 aa19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 SMARCD1Q96GM5 515 aa19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 ACOX2Q99424 681 aa19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 DUSP9Q99956 384 aaKnown RBP19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 XYLT2Q9H1B5 865 aa19.39■□□□□ 0.69
UPK3BP1-201ENST00000428678 CD59P13987 128 aa19.38■□□□□ 0.69
UPK3BP1-201ENST00000428678 SYT1P21579 422 aa19.38■□□□□ 0.69
UPK3BP1-201ENST00000428678 BIRC3Q13489 604 aa19.38■□□□□ 0.69
UPK3BP1-201ENST00000428678 CUL4AQ13619 759 aa19.38■□□□□ 0.69
UPK3BP1-201ENST00000428678 ACAP1Q15027 740 aa19.38■□□□□ 0.69
UPK3BP1-201ENST00000428678 ZNF423Q2M1K9 1284 aa19.38■□□□□ 0.69
UPK3BP1-201ENST00000428678 PAQR9Q6ZVX9 377 aa19.38■□□□□ 0.69
UPK3BP1-201ENST00000428678 RGL4Q8IZJ4 473 aa19.38■□□□□ 0.69
UPK3BP1-201ENST00000428678 IPO4Q8TEX9 1081 aaKnown RBP19.38■□□□□ 0.69
UPK3BP1-201ENST00000428678 SCFD1Q8WVM8 642 aa19.38■□□□□ 0.69
UPK3BP1-201ENST00000428678 TNIP3Q96KP6 325 aa19.38■□□□□ 0.69
UPK3BP1-201ENST00000428678 BBS2Q9BXC9 721 aa19.38■□□□□ 0.69
UPK3BP1-201ENST00000428678 KRT82Q9NSB4 513 aa19.38■□□□□ 0.69
UPK3BP1-201ENST00000428678 KBTBD4Q9NVX7 518 aa19.38■□□□□ 0.69
UPK3BP1-201ENST00000428678 IL37Q9NZH6 218 aa19.38■□□□□ 0.69
UPK3BP1-201ENST00000428678 STARD13Q9Y3M8 1113 aa19.38■□□□□ 0.69
UPK3BP1-201ENST00000428678 MORC2Q9Y6X9 1032 aaPredicted RBP19.38■□□□□ 0.69
UPK3BP1-201ENST00000428678 IGSF10Q6WRI0 2623 aa19.38■□□□□ 0.69
UPK3BP1-201ENST00000428678 A0A1W2PQD8 194 aa19.37■□□□□ 0.69
UPK3BP1-201ENST00000428678 TLR5O60602 858 aa19.37■□□□□ 0.69
UPK3BP1-201ENST00000428678 NDUFS2O75306 463 aa19.37■□□□□ 0.69
UPK3BP1-201ENST00000428678 ZDHHC11BP0C7U3 371 aa19.37■□□□□ 0.69
UPK3BP1-201ENST00000428678 AMPD3Q01432 767 aa19.37■□□□□ 0.69
UPK3BP1-201ENST00000428678 HNRNPDQ14103 355 aaKnown RBP19.37■□□□□ 0.69
UPK3BP1-201ENST00000428678 ZNF699Q32M78 642 aa19.37■□□□□ 0.69
UPK3BP1-201ENST00000428678 PLEKHG6Q3KR16 790 aa19.37■□□□□ 0.69
UPK3BP1-201ENST00000428678 SPRYD3Q8NCJ5 442 aa19.37■□□□□ 0.69
UPK3BP1-201ENST00000428678 DHX58Q96C10 678 aa19.37■□□□□ 0.69
UPK3BP1-201ENST00000428678 CAMK1GQ96NX5 476 aa19.37■□□□□ 0.69
UPK3BP1-201ENST00000428678 XPO6Q96QU8 1125 aaKnown RBP19.37■□□□□ 0.69
UPK3BP1-201ENST00000428678 GZF1Q9H116 711 aaPredicted RBP19.37■□□□□ 0.69
UPK3BP1-201ENST00000428678 DNAAF2Q9NVR5 837 aaKnown RBP19.37■□□□□ 0.69
UPK3BP1-201ENST00000428678 COMMD8Q9NX08 183 aa19.37■□□□□ 0.69
UPK3BP1-201ENST00000428678 APC2O95996 2303 aa19.37■□□□□ 0.69
UPK3BP1-201ENST00000428678 UBE4BO95155 1302 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 SH3BP5O60239 455 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 CACNG3O60359 315 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 TYRP14679 529 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 CASP4P49662 377 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 PGFP49763 221 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 STK38Q15208 465 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 E2F4Q16254 413 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 ZNF667Q5HYK9 610 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 KIAA1324Q6UXG2 1013 aaKnown RBP19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 TPGS1Q6ZTW0 290 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 HTR3DQ70Z44 454 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 RAB44Q7Z6P3 723 aaPredicted RBP19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 ACOT1Q86TX2 421 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 ELMO3Q96BJ8 720 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 SLC6A17Q9H1V8 727 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 CUEDC2Q9H467 287 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 CD248Q9HCU0 757 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 CD93Q9NPY3 652 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 CACNA2D2Q9NY47 1150 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 WDR35Q9P2L0 1181 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 SUSD2Q9UGT4 822 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 PCDHB9Q9Y5E1 797 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 RAD54BQ9Y620 910 aa19.36■□□□□ 0.69
UPK3BP1-201ENST00000428678 FAM92AA1XBS5 289 aa19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 FAM221BA6H8Z2 402 aa19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 PRRT4C9JH25 899 aa19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 TBX18O95935 607 aa19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 CCDC130P13994 396 aa19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 SNRPFP62306 86 aaKnown RBP19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 GOLGA8FQ08AF8 430 aa19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 GOLGA8DPQ0D2H9 430 aa19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 TRIP6Q15654 476 aaKnown RBP19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 SYCP2LQ5T4T6 812 aa19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 TOGARAM2Q6ZUX3 1019 aa19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 FUKQ8N0W3 1084 aa19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 SMOQ99835 787 aa19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 GABRG3Q99928 467 aa19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 KLF16Q9BXK1 252 aaPredicted RBP19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 FBXO44Q9H4M3 255 aa19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 FAM124BQ9H5Z6 455 aaPredicted RBP19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 VRTNQ9H8Y1 702 aa19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 TLR8Q9NR97 1041 aaKnown RBP19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 LSM7Q9UK45 103 aaKnown RBP19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 KNL1Q8NG31 2342 aa19.35■□□□□ 0.69
UPK3BP1-201ENST00000428678 LOC400499M0QZD8 3231 aa19.34■□□□□ 0.69
UPK3BP1-201ENST00000428678 TAF4O00268 1085 aa19.34■□□□□ 0.69
UPK3BP1-201ENST00000428678 GREM1O60565 184 aa19.34■□□□□ 0.69
UPK3BP1-201ENST00000428678 EXOC3O60645 756 aa19.34■□□□□ 0.69
UPK3BP1-201ENST00000428678 GNSP15586 552 aa19.34■□□□□ 0.69
UPK3BP1-201ENST00000428678 MAP3K7CLP57077 242 aa19.34■□□□□ 0.69
UPK3BP1-201ENST00000428678 SLC14A1Q13336 389 aa19.34■□□□□ 0.69
UPK3BP1-201ENST00000428678 ORC1Q13415 861 aa19.34■□□□□ 0.69
UPK3BP1-201ENST00000428678 NCOA4Q13772 614 aa19.34■□□□□ 0.69
UPK3BP1-201ENST00000428678 PROSER1Q86XN7 944 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms