RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 CFIP05156 583 aa17.51■□□□□ 0.39
VARS-216ENST00000428445 CEACAM1P13688 526 aa17.51■□□□□ 0.39
VARS-216ENST00000428445 CSRP1P21291 193 aaKnown RBP17.51■□□□□ 0.39
VARS-216ENST00000428445 ADORA2BP29275 332 aa17.51■□□□□ 0.39
VARS-216ENST00000428445 NDST1P52848 882 aa17.51■□□□□ 0.39
VARS-216ENST00000428445 CACNA1EQ15878 2313 aa17.51■□□□□ 0.39
VARS-216ENST00000428445 LYSMD4Q5XG99 296 aa17.51■□□□□ 0.39
VARS-216ENST00000428445 TOGARAM2Q6ZUX3 1019 aa17.51■□□□□ 0.39
VARS-216ENST00000428445 BHMTQ93088 406 aa17.51■□□□□ 0.39
VARS-216ENST00000428445 P2RY11Q96G91 374 aa17.51■□□□□ 0.39
VARS-216ENST00000428445 SMARCD1Q96GM5 515 aa17.51■□□□□ 0.39
VARS-216ENST00000428445 GTPBP2Q9BX10 602 aaKnown RBP17.51■□□□□ 0.39
VARS-216ENST00000428445 KLF16Q9BXK1 252 aaPredicted RBP17.51■□□□□ 0.39
VARS-216ENST00000428445 TMEM121BQ9BXQ6 578 aaPredicted RBP17.51■□□□□ 0.39
VARS-216ENST00000428445 NUSAP1Q9BXS6 441 aaKnown RBP17.51■□□□□ 0.39
VARS-216ENST00000428445 NACA2Q9H009 215 aa17.51■□□□□ 0.39
VARS-216ENST00000428445 VRTNQ9H8Y1 702 aa17.51■□□□□ 0.39
VARS-216ENST00000428445 CALCOCO1Q9P1Z2 691 aa17.51■□□□□ 0.39
VARS-216ENST00000428445 EVLQ9UI08 416 aaPredicted RBP17.51■□□□□ 0.39
VARS-216ENST00000428445 PILRBQ9UKJ0 227 aa17.51■□□□□ 0.39
VARS-216ENST00000428445 RAD54BQ9Y620 910 aa17.51■□□□□ 0.39
VARS-216ENST00000428445 A0A1W2PQF6 199 aa17.5■□□□□ 0.39
VARS-216ENST00000428445 NEDD8-MDP1E9PL57 170 aa17.5■□□□□ 0.39
VARS-216ENST00000428445 TLR5O60602 858 aa17.5■□□□□ 0.39
VARS-216ENST00000428445 HOXB2P14652 356 aa17.5■□□□□ 0.39
VARS-216ENST00000428445 RPL6Q02878 288 aaKnown RBP17.5■□□□□ 0.39
VARS-216ENST00000428445 HSF5Q4G112 596 aaPredicted RBP17.5■□□□□ 0.39
VARS-216ENST00000428445 TERB1Q8NA31 727 aa17.5■□□□□ 0.39
VARS-216ENST00000428445 KIAA0895Q8NCT3 520 aa17.5■□□□□ 0.39
VARS-216ENST00000428445 OTUB2Q96DC9 234 aa17.5■□□□□ 0.39
VARS-216ENST00000428445 TNIP3Q96KP6 325 aa17.5■□□□□ 0.39
VARS-216ENST00000428445 TWNKQ96RR1 684 aa17.5■□□□□ 0.39
VARS-216ENST00000428445 MAGEF1Q9HAY2 307 aa17.5■□□□□ 0.39
VARS-216ENST00000428445 DNAJC17Q9NVM6 304 aaKnown RBP17.5■□□□□ 0.39
VARS-216ENST00000428445 DMAC2Q9NW81 257 aa17.5■□□□□ 0.39
VARS-216ENST00000428445 CGNQ9P2M7 1197 aaKnown RBP17.5■□□□□ 0.39
VARS-216ENST00000428445 ZZEF1O43149 2961 aa17.5■□□□□ 0.39
VARS-216ENST00000428445 ATP8B3O60423 1300 aa17.49■□□□□ 0.39
VARS-216ENST00000428445 SPEGQ15772 3267 aa17.49■□□□□ 0.39
VARS-216ENST00000428445 PVALEFA0A1B0GWK0 134 aa17.49■□□□□ 0.39
VARS-216ENST00000428445 FAM92AA1XBS5 289 aa17.49■□□□□ 0.39
VARS-216ENST00000428445 WASH3PC4AMC7 463 aa17.49■□□□□ 0.39
VARS-216ENST00000428445 PRRT4C9JH25 899 aa17.49■□□□□ 0.39
VARS-216ENST00000428445 HYAL3O43820 417 aaPredicted RBP17.49■□□□□ 0.39
VARS-216ENST00000428445 FAM193AP78312 1265 aa17.49■□□□□ 0.39
VARS-216ENST00000428445 CLDN10P78369 228 aa17.49■□□□□ 0.39
VARS-216ENST00000428445 LMAN2Q12907 356 aa17.49■□□□□ 0.39
VARS-216ENST00000428445 C1orf220Q5T0J3 134 aa17.49■□□□□ 0.39
VARS-216ENST00000428445 SLC23A3Q6PIS1 610 aa17.49■□□□□ 0.39
VARS-216ENST00000428445 ADAM33Q9BZ11 813 aa17.49■□□□□ 0.39
VARS-216ENST00000428445 NMUR1Q9HB89 426 aa17.49■□□□□ 0.39
VARS-216ENST00000428445 PLK2Q9NYY3 685 aa17.49■□□□□ 0.39
VARS-216ENST00000428445 CYP8B1Q9UNU6 501 aa17.49■□□□□ 0.39
VARS-216ENST00000428445 IGHV1OR15-9A0A0B4J2B8 117 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 HHLA1C9JL84 531 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 CYP26A1O43174 497 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 TYRP14679 529 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 NTSR1P30989 418 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 ME1P48163 572 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 TUBP50607 506 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 PKP1Q13835 747 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 KMT5BQ4FZB7 885 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 RESP18Q5W5W9 173 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 GRAMD4Q6IC98 578 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 HTR3DQ70Z44 454 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 SV2AQ7L0J3 742 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 SLC41A1Q8IVJ1 513 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 CRYBG2Q8N1P7 616 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 IPO4Q8TEX9 1081 aaKnown RBP17.48■□□□□ 0.39
VARS-216ENST00000428445 PAGE5Q96GU1 130 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 BBS2Q9BXC9 721 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 KCTD10Q9H3F6 313 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 CSNK1G1Q9HCP0 422 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 CD248Q9HCU0 757 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 TLR8Q9NR97 1041 aaKnown RBP17.48■□□□□ 0.39
VARS-216ENST00000428445 FAM13BQ9NYF5 915 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 CACNA1GO43497 2377 aa17.48■□□□□ 0.39
VARS-216ENST00000428445 IGF2RP11717 2491 aa17.47■□□□□ 0.39
VARS-216ENST00000428445 A0A1W2PQH9 124 aa17.47■□□□□ 0.39
VARS-216ENST00000428445 NDUFV2P19404 249 aa17.47■□□□□ 0.39
VARS-216ENST00000428445 ASPAP45381 313 aa17.47■□□□□ 0.39
VARS-216ENST00000428445 ZNF33AQ06730 810 aa17.47■□□□□ 0.39
VARS-216ENST00000428445 BYSLQ13895 437 aaKnown RBP17.47■□□□□ 0.39
VARS-216ENST00000428445 SGSM1Q2NKQ1 1148 aa17.47■□□□□ 0.39
VARS-216ENST00000428445 ZACNQ401N2 412 aa17.47■□□□□ 0.39
VARS-216ENST00000428445 CEP135Q66GS9 1140 aa17.47■□□□□ 0.39
VARS-216ENST00000428445 ATL3Q6DD88 541 aa17.47■□□□□ 0.39
VARS-216ENST00000428445 CHPFQ8IZ52 775 aa17.47■□□□□ 0.39
VARS-216ENST00000428445 SPRYD3Q8NCJ5 442 aa17.47■□□□□ 0.39
VARS-216ENST00000428445 GATA6Q92908 595 aa17.47■□□□□ 0.39
VARS-216ENST00000428445 COMMD8Q9NX08 183 aa17.47■□□□□ 0.39
VARS-216ENST00000428445 CACNA2D2Q9NY47 1150 aa17.47■□□□□ 0.39
VARS-216ENST00000428445 AP5Z1O43299 807 aa17.46■□□□□ 0.39
VARS-216ENST00000428445 ACTN4O43707 911 aaKnown RBP17.46■□□□□ 0.39
VARS-216ENST00000428445 HLA-DRAP01903 254 aa17.46■□□□□ 0.39
VARS-216ENST00000428445 NR3C1P04150 777 aa17.46■□□□□ 0.39
VARS-216ENST00000428445 CISD3P0C7P0 127 aa17.46■□□□□ 0.39
VARS-216ENST00000428445 ACO1P21399 889 aaKnown RBP17.46■□□□□ 0.39
VARS-216ENST00000428445 MAOBP27338 520 aa17.46■□□□□ 0.39
VARS-216ENST00000428445 ATP5C1P36542 298 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms