RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 MCCD1P59942 119 aaPredicted RBP18.39■□□□□ 0.53
DDR1-235ENST00000428153 LMAN2Q12907 356 aa18.39■□□□□ 0.53
DDR1-235ENST00000428153 SFTPA1Q8IWL2 248 aa18.39■□□□□ 0.53
DDR1-235ENST00000428153 ZNF513Q8N8E2 541 aaPredicted RBP18.39■□□□□ 0.53
DDR1-235ENST00000428153 CCDC47Q96A33 483 aaKnown RBP18.39■□□□□ 0.53
DDR1-235ENST00000428153 LSM7Q9UK45 103 aaKnown RBP18.39■□□□□ 0.53
DDR1-235ENST00000428153 ZFHX4Q86UP3 3567 aa18.39■□□□□ 0.53
DDR1-235ENST00000428153 FRYQ5TBA9 3013 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 CFAP47Q6ZTR5 3102 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 CACNG3O60359 315 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 GREM1O60565 184 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 BEST1O76090 585 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 HLA-DRAP01903 254 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 CSRP1P21291 193 aaKnown RBP18.38■□□□□ 0.53
DDR1-235ENST00000428153 KCNA4P22459 653 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 ATP5C1P36542 298 aaKnown RBP18.38■□□□□ 0.53
DDR1-235ENST00000428153 PIK3CAP42336 1068 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 DHPSP49366 369 aaPredicted RBP18.38■□□□□ 0.53
DDR1-235ENST00000428153 VAMP7P51809 220 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 KDSRQ06136 332 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 PKP1Q13835 747 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 MAP7D1Q3KQU3 841 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 C1orf220Q5T0J3 134 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 EMC10Q5UCC4 262 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 CEP135Q66GS9 1140 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 TMEM25Q86YD3 366 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 SYT12Q8IV01 421 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 C12orf29Q8N999 325 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 CHAMP1Q96JM3 812 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 XPO6Q96QU8 1125 aaKnown RBP18.38■□□□□ 0.53
DDR1-235ENST00000428153 NT5C1AQ9BXI3 368 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 KLF16Q9BXK1 252 aaPredicted RBP18.38■□□□□ 0.53
DDR1-235ENST00000428153 FAM124BQ9H5Z6 455 aaPredicted RBP18.38■□□□□ 0.53
DDR1-235ENST00000428153 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.38■□□□□ 0.53
DDR1-235ENST00000428153 BCCIPQ9P287 314 aaKnown RBP eCLIP18.38■□□□□ 0.53
DDR1-235ENST00000428153 WDR35Q9P2L0 1181 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 HMGXB4Q9UGU5 601 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 INVSQ9Y283 1065 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 GON4LQ3T8J9 2241 aa18.38■□□□□ 0.53
DDR1-235ENST00000428153 A0A1B0GVL5 298 aa18.37■□□□□ 0.53
DDR1-235ENST00000428153 CDX4O14627 284 aaPredicted RBP18.37■□□□□ 0.53
DDR1-235ENST00000428153 CEACAM1P13688 526 aa18.37■□□□□ 0.53
DDR1-235ENST00000428153 RPL13P26373 211 aaKnown RBP18.37■□□□□ 0.53
DDR1-235ENST00000428153 NTSR1P30989 418 aa18.37■□□□□ 0.53
DDR1-235ENST00000428153 ANO4Q32M45 955 aa18.37■□□□□ 0.53
DDR1-235ENST00000428153 PEAR1Q5VY43 1037 aaPredicted RBP18.37■□□□□ 0.53
DDR1-235ENST00000428153 PSAPL1Q6NUJ1 521 aa18.37■□□□□ 0.53
DDR1-235ENST00000428153 SLC36A4Q6YBV0 504 aa18.37■□□□□ 0.53
DDR1-235ENST00000428153 CLEC20AQ6ZU45 233 aa18.37■□□□□ 0.53
DDR1-235ENST00000428153 TADA2BQ86TJ2 420 aa18.37■□□□□ 0.53
DDR1-235ENST00000428153 TTC39CQ8N584 583 aa18.37■□□□□ 0.53
DDR1-235ENST00000428153 CYFIP2Q96F07 1278 aa18.37■□□□□ 0.53
DDR1-235ENST00000428153 CDK5RAP1Q96SZ6 601 aaKnown RBP18.37■□□□□ 0.53
DDR1-235ENST00000428153 NUSAP1Q9BXS6 441 aaKnown RBP18.37■□□□□ 0.53
DDR1-235ENST00000428153 FAM49BQ9NUQ9 324 aa18.37■□□□□ 0.53
DDR1-235ENST00000428153 TCRBV21S2A2A0A5A6 115 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 HHLA1C9JL84 531 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 MAP3K13O43283 966 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 AP5Z1O43299 807 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 CILPO75339 1184 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 NR2F2P24468 414 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 GTF2H1P32780 548 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 PI4KAP42356 2102 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 SYKP43405 635 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 NOVA1P51513 510 aaKnown RBP18.36■□□□□ 0.53
DDR1-235ENST00000428153 KRT85P78386 507 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 C10orf76Q5T2E6 689 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 GRAMD4Q6IC98 578 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 SPOPLQ6IQ16 392 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 TTC30AQ86WT1 665 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 GUF1Q8N442 669 aaKnown RBP18.36■□□□□ 0.53
DDR1-235ENST00000428153 NAT16Q8N8M0 369 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 CCDC150Q8NCX0 1101 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 HMGB4Q8WW32 186 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 PIGKQ92643 395 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 SPATA32Q96LK8 384 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 NIF3L1Q9GZT8 377 aa18.36■□□□□ 0.53
DDR1-235ENST00000428153 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.36■□□□□ 0.53
DDR1-235ENST00000428153 TNRC6BQ9UPQ9 1833 aaKnown RBP18.36■□□□□ 0.53
DDR1-235ENST00000428153 GFRA2O00451 464 aa18.35■□□□□ 0.53
DDR1-235ENST00000428153 ZBTB24O43167 697 aaPredicted RBP18.35■□□□□ 0.53
DDR1-235ENST00000428153 ZNF217O75362 1048 aa18.35■□□□□ 0.53
DDR1-235ENST00000428153 KRT13P13646 458 aa18.35■□□□□ 0.53
DDR1-235ENST00000428153 HOXB2P14652 356 aa18.35■□□□□ 0.53
DDR1-235ENST00000428153 PSMC2P35998 433 aaKnown RBP18.35■□□□□ 0.53
DDR1-235ENST00000428153 PLA2G4AP47712 749 aa18.35■□□□□ 0.53
DDR1-235ENST00000428153 PGFP49763 221 aa18.35■□□□□ 0.53
DDR1-235ENST00000428153 KIF11P52732 1056 aa18.35■□□□□ 0.53
DDR1-235ENST00000428153 IRX4P78413 519 aa18.35■□□□□ 0.53
DDR1-235ENST00000428153 TRIM61Q5EBN2 209 aa18.35■□□□□ 0.53
DDR1-235ENST00000428153 LYSMD4Q5XG99 296 aa18.35■□□□□ 0.53
DDR1-235ENST00000428153 SLC23A3Q6PIS1 610 aa18.35■□□□□ 0.53
DDR1-235ENST00000428153 CCDC186Q7Z3E2 898 aa18.35■□□□□ 0.53
DDR1-235ENST00000428153 RABEPKQ7Z6M1 372 aa18.35■□□□□ 0.53
DDR1-235ENST00000428153 CEP76Q8TAP6 659 aa18.35■□□□□ 0.53
DDR1-235ENST00000428153 RLN3Q8WXF3 142 aa18.35■□□□□ 0.53
DDR1-235ENST00000428153 WBP2Q969T9 261 aa18.35■□□□□ 0.53
DDR1-235ENST00000428153 TMEM8AQ9HCN3 771 aa18.35■□□□□ 0.53
DDR1-235ENST00000428153 DNAJC17Q9NVM6 304 aaKnown RBP18.35■□□□□ 0.53
DDR1-235ENST00000428153 CLIC5Q9NZA1 410 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms