RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 HPS4Q9NQG7 708 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 FAM49BQ9NUQ9 324 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.62□□□□□ -0.873e-14■■■■■ 28.7
SMC1A-203ENST00000428014 TSPAN16Q9UKR8 245 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 CCL26Q9Y258 94 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 TICRRQ7Z2Z1 1910 aa9.62□□□□□ -0.87
SMC1A-203ENST00000428014 PTPRZ1P23471 2315 aaPredicted RBP9.61□□□□□ -0.87
SMC1A-203ENST00000428014 MAP3K7O43318 606 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 COCHO43405 550 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 PI15O43692 258 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 GREM1O60565 184 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 LRRN2O75325 713 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 CLSTN1O94985 981 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 ZBED1O96006 694 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 ADH1CP00326 375 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 GLI1P08151 1106 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 CD58P19256 250 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 CHKAP35790 457 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 PDE4CQ08493 712 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 GRSF1Q12849 480 aaKnown RBP eCLIP9.61□□□□□ -0.87
SMC1A-203ENST00000428014 ANGPT1Q15389 498 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 STX1AQ16623 288 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 VWA3BQ502W6 1294 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 ISM2Q6H9L7 571 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 MSANTD2Q6P1R3 559 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 TMEM270Q6UE05 265 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 TTC30AQ86WT1 665 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 GPIHBP1Q8IV16 184 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 FAM217AQ8IXS0 508 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 CAMKK1Q8N5S9 505 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 ZNF557Q8N988 423 aaPredicted RBP9.61□□□□□ -0.87
SMC1A-203ENST00000428014 SCAMP5Q8TAC9 235 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 AZIN2Q96A70 460 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 SLC22A12Q96S37 553 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 KLF16Q9BXK1 252 aaPredicted RBP9.61□□□□□ -0.87
SMC1A-203ENST00000428014 ADAM33Q9BZ11 813 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 NAT10Q9H0A0 1025 aaKnown RBP9.61□□□□□ -0.87
SMC1A-203ENST00000428014 INTS2Q9H0H0 1204 aaKnown RBP9.61□□□□□ -0.87
SMC1A-203ENST00000428014 MMRN2Q9H8L6 949 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.61□□□□□ -0.872e-6■■■■■ 161.1
SMC1A-203ENST00000428014 ABCC13Q9NSE7 274 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 DUS2Q9NX74 493 aaKnown RBP9.61□□□□□ -0.87
SMC1A-203ENST00000428014 DNMT3LQ9UJW3 386 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 STOML2Q9UJZ1 356 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 PCDHGC3Q9UN70 934 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 HBS1LQ9Y450 684 aaKnown RBP9.61□□□□□ -0.87
SMC1A-203ENST00000428014 CPQQ9Y646 472 aa9.61□□□□□ -0.87
SMC1A-203ENST00000428014 OTOGLQ3ZCN5 2332 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 GVINP1Q7Z2Y8 2422 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 NPC1O15118 1278 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 LAMTOR5O43504 91 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 LILRB5O75023 590 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 TPM2P07951 284 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 MBL2P11226 248 aaPredicted RBP9.6□□□□□ -0.87
SMC1A-203ENST00000428014 TDGF1P13385 188 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 PON1P27169 355 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 ADORA2BP29275 332 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 GJA4P35212 333 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 SCNN1AP37088 669 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 GPD2P43304 727 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 MTIF2P46199 727 aaKnown RBP9.6□□□□□ -0.87
SMC1A-203ENST00000428014 STX17P56962 302 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 ZXDBP98169 803 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 MYL5Q02045 173 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 RING1Q06587 406 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 UBXN2BQ14CS0 331 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 KLHL40Q2TBA0 621 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 TCP11X2Q5H9J9 407 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 MIIPQ5JXC2 388 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 ACBD5Q5T8D3 534 aaPredicted RBP9.6□□□□□ -0.87
SMC1A-203ENST00000428014 SASS6Q6UVJ0 657 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 Q6ZNB5 142 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 TMEM110Q86TL2 294 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 CPXM2Q8N436 756 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 RBBP8NLQ8NC74 664 aaPredicted RBP9.6□□□□□ -0.87
SMC1A-203ENST00000428014 ANKRD20A12PQ8NF67 263 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 ACDQ96AP0 544 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 PLD4Q96BZ4 506 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 KREMEN1Q96MU8 473 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 CYP2S1Q96SQ9 504 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 P2RY13Q9BPV8 354 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 LRRC4Q9HBW1 653 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 TRPC7Q9HCX4 862 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 ASNSD1Q9NWL6 643 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 ZSCAN32Q9NX65 697 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 GTSE1Q9NYZ3 720 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 GMIPQ9P107 970 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 WDR35Q9P2L0 1181 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 LSM7Q9UK45 103 aaKnown RBP9.6□□□□□ -0.87
SMC1A-203ENST00000428014 STRIP2Q9ULQ0 834 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 NFE2L3Q9Y4A8 694 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 WDFY4Q6ZS81 3184 aa9.6□□□□□ -0.87
SMC1A-203ENST00000428014 KCNJ18B7U540 433 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 ZNF18P17022 549 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 CDH5P33151 784 aaPredicted RBP9.59□□□□□ -0.87
SMC1A-203ENST00000428014 TNFRSF4P43489 277 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 TKTL1P51854 596 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 MRPS21P82921 87 aaKnown RBP9.59□□□□□ -0.87
SMC1A-203ENST00000428014 GAD2Q05329 585 aa9.59□□□□□ -0.87
SMC1A-203ENST00000428014 KCNJ12Q14500 433 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms