RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 SETSIPP0DME0 302 aa21.71■■□□□ 1.07
HSPG2-205ENST00000427897 SEC13P55735 322 aa21.71■■□□□ 1.07
HSPG2-205ENST00000427897 YWHAGP61981 247 aaKnown RBP eCLIP21.71■■□□□ 1.07
HSPG2-205ENST00000427897 STILQ15468 1287 aa21.71■■□□□ 1.07
HSPG2-205ENST00000427897 KLHDC10Q6PID8 442 aa21.71■■□□□ 1.07
HSPG2-205ENST00000427897 PRR23BQ6ZRT6 265 aa21.71■■□□□ 1.07
HSPG2-205ENST00000427897 HTR3DQ70Z44 454 aa21.71■■□□□ 1.07
HSPG2-205ENST00000427897 LONP2Q86WA8 852 aa21.71■■□□□ 1.07
HSPG2-205ENST00000427897 ARHGEF19Q8IW93 802 aa21.71■■□□□ 1.07
HSPG2-205ENST00000427897 RBBP8NLQ8NC74 664 aaPredicted RBP21.71■■□□□ 1.07
HSPG2-205ENST00000427897 NELL1Q92832 810 aa21.71■■□□□ 1.07
HSPG2-205ENST00000427897 ACDQ96AP0 544 aa21.71■■□□□ 1.07
HSPG2-205ENST00000427897 SPHK2Q9NRA0 654 aa21.71■■□□□ 1.07
HSPG2-205ENST00000427897 MDM4O15151 490 aa21.7■■□□□ 1.06
HSPG2-205ENST00000427897 LILRB5O75023 590 aa21.7■■□□□ 1.06
HSPG2-205ENST00000427897 PAPSS2O95340 614 aaPredicted RBP21.7■■□□□ 1.06
HSPG2-205ENST00000427897 HMBSP08397 361 aa21.7■■□□□ 1.06
HSPG2-205ENST00000427897 CNR2P34972 360 aa21.7■■□□□ 1.06
HSPG2-205ENST00000427897 OPRD1P41143 372 aa21.7■■□□□ 1.06
HSPG2-205ENST00000427897 MFAP3P55082 362 aa21.7■■□□□ 1.06
HSPG2-205ENST00000427897 COG7P83436 770 aa21.7■■□□□ 1.06
HSPG2-205ENST00000427897 GCNT1Q02742 428 aa21.7■■□□□ 1.06
HSPG2-205ENST00000427897 EFEMP1Q12805 493 aa21.7■■□□□ 1.06
HSPG2-205ENST00000427897 CEP68Q76N32 757 aa21.7■■□□□ 1.06
HSPG2-205ENST00000427897 SCD5Q86SK9 330 aa21.7■■□□□ 1.06
HSPG2-205ENST00000427897 NAT16Q8N8M0 369 aa21.7■■□□□ 1.06
HSPG2-205ENST00000427897 LMO3Q8TAP4 145 aa21.7■■□□□ 1.06
HSPG2-205ENST00000427897 RNF139Q8WU17 664 aa21.7■■□□□ 1.06
HSPG2-205ENST00000427897 KAT5Q92993 513 aa21.7■■□□□ 1.06
HSPG2-205ENST00000427897 FAM81BQ96LP2 452 aa21.7■■□□□ 1.06
HSPG2-205ENST00000427897 ULBP1Q9BZM6 244 aa21.7■■□□□ 1.06
HSPG2-205ENST00000427897 ARHGEF4Q9NR80 690 aa21.7■■□□□ 1.06
HSPG2-205ENST00000427897 FANCMQ8IYD8 2048 aa21.69■■□□□ 1.06
HSPG2-205ENST00000427897 K7ESF4 209 aa21.69■■□□□ 1.06
HSPG2-205ENST00000427897 LCP1P13796 627 aa21.69■■□□□ 1.06
HSPG2-205ENST00000427897 EIF2DP41214 584 aaKnown RBP21.69■■□□□ 1.06
HSPG2-205ENST00000427897 SLC6A11P48066 632 aa21.69■■□□□ 1.06
HSPG2-205ENST00000427897 ADIGQ0VDE8 80 aa21.69■■□□□ 1.06
HSPG2-205ENST00000427897 SIM2Q14190 667 aaPredicted RBP21.69■■□□□ 1.06
HSPG2-205ENST00000427897 CNGA2Q16280 664 aa21.69■■□□□ 1.06
HSPG2-205ENST00000427897 C2orf27AQ580R0 203 aa21.69■■□□□ 1.06
HSPG2-205ENST00000427897 RAB41Q5JT25 222 aa21.69■■□□□ 1.06
HSPG2-205ENST00000427897 PKN3Q6P5Z2 889 aa21.69■■□□□ 1.06
HSPG2-205ENST00000427897 LCLAT1Q6UWP7 414 aa21.69■■□□□ 1.06
HSPG2-205ENST00000427897 GBP6Q6ZN66 633 aa21.69■■□□□ 1.06
HSPG2-205ENST00000427897 UBR7Q8N806 425 aa21.69■■□□□ 1.06
HSPG2-205ENST00000427897 XPO6Q96QU8 1125 aaKnown RBP21.69■■□□□ 1.06
HSPG2-205ENST00000427897 CRACR2AQ9BSW2 395 aa21.69■■□□□ 1.06
HSPG2-205ENST00000427897 EPC1Q9H2F5 836 aa21.69■■□□□ 1.06
HSPG2-205ENST00000427897 DEC1Q9P2X7 70 aa21.69■■□□□ 1.06
HSPG2-205ENST00000427897 GMEB2Q9UKD1 530 aa21.69■■□□□ 1.06
HSPG2-205ENST00000427897 SMG5Q9UPR3 1016 aaKnown RBP21.69■■□□□ 1.06
HSPG2-205ENST00000427897 M0QYV0 167 aa21.68■■□□□ 1.06
HSPG2-205ENST00000427897 RNF225M0QZC1 329 aaPredicted RBP21.68■■□□□ 1.06
HSPG2-205ENST00000427897 TULP2O00295 520 aa21.68■■□□□ 1.06
HSPG2-205ENST00000427897 O00370 1275 aa21.68■■□□□ 1.06
HSPG2-205ENST00000427897 PES1O00541 588 aaKnown RBP21.68■■□□□ 1.06
HSPG2-205ENST00000427897 TDGF1P13385 188 aa21.68■■□□□ 1.06
HSPG2-205ENST00000427897 BRD2P25440 801 aaKnown RBP21.68■■□□□ 1.06
HSPG2-205ENST00000427897 USP8P40818 1118 aa21.68■■□□□ 1.06
HSPG2-205ENST00000427897 KDSRQ06136 332 aa21.68■■□□□ 1.06
HSPG2-205ENST00000427897 DMWDQ09019 674 aa21.68■■□□□ 1.06
HSPG2-205ENST00000427897 TPGS1Q6ZTW0 290 aa21.68■■□□□ 1.06
HSPG2-205ENST00000427897 ENOSF1Q7L5Y1 443 aa21.68■■□□□ 1.06
HSPG2-205ENST00000427897 TMEM25Q86YD3 366 aa21.68■■□□□ 1.06
HSPG2-205ENST00000427897 ZNF276Q8N554 614 aa21.68■■□□□ 1.06
HSPG2-205ENST00000427897 CAMKK1Q8N5S9 505 aa21.68■■□□□ 1.06
HSPG2-205ENST00000427897 SUMF1Q8NBK3 374 aa21.68■■□□□ 1.06
HSPG2-205ENST00000427897 GOLGA1Q92805 767 aa21.68■■□□□ 1.06
HSPG2-205ENST00000427897 DCLK3Q9C098 648 aa21.68■■□□□ 1.06
HSPG2-205ENST00000427897 THAP9Q9H5L6 903 aa21.68■■□□□ 1.06
HSPG2-205ENST00000427897 OLA1Q9NTK5 396 aaKnown RBP21.68■■□□□ 1.06
HSPG2-205ENST00000427897 LMBRD1Q9NUN5 540 aa21.68■■□□□ 1.06
HSPG2-205ENST00000427897 C2orf42Q9NWW7 574 aa21.68■■□□□ 1.06
HSPG2-205ENST00000427897 ZNF510Q9Y2H8 683 aa21.68■■□□□ 1.06
HSPG2-205ENST00000427897 TBC1D3BA6NDS4 549 aa21.67■■□□□ 1.06
HSPG2-205ENST00000427897 MED7O43513 233 aa21.67■■□□□ 1.06
HSPG2-205ENST00000427897 KAT7O95251 611 aa21.67■■□□□ 1.06
HSPG2-205ENST00000427897 GRIA2P42262 883 aa21.67■■□□□ 1.06
HSPG2-205ENST00000427897 PXNP49023 591 aaPredicted RBP21.67■■□□□ 1.06
HSPG2-205ENST00000427897 RGS7P49802 495 aa21.67■■□□□ 1.06
HSPG2-205ENST00000427897 DMC1Q14565 340 aa21.67■■□□□ 1.06
HSPG2-205ENST00000427897 LPAL2Q16609 132 aa21.67■■□□□ 1.06
HSPG2-205ENST00000427897 SYT13Q7L8C5 426 aa21.67■■□□□ 1.06
HSPG2-205ENST00000427897 WDR5BQ86VZ2 330 aa21.67■■□□□ 1.06
HSPG2-205ENST00000427897 TFAP2BQ92481 460 aa21.67■■□□□ 1.06
HSPG2-205ENST00000427897 WBP2Q969T9 261 aa21.67■■□□□ 1.06
HSPG2-205ENST00000427897 BBS2Q9BXC9 721 aa21.67■■□□□ 1.06
HSPG2-205ENST00000427897 MARCH2Q9P0N8 246 aa21.67■■□□□ 1.06
HSPG2-205ENST00000427897 WDR35Q9P2L0 1181 aa21.67■■□□□ 1.06
HSPG2-205ENST00000427897 CACNA1HO95180 2353 aa21.66■■□□□ 1.06
HSPG2-205ENST00000427897 SLC12A8A0AV02 714 aa21.66■■□□□ 1.06
HSPG2-205ENST00000427897 NEDD8-MDP1E9PL57 170 aa21.66■■□□□ 1.06
HSPG2-205ENST00000427897 K7EQS6 105 aa21.66■■□□□ 1.06
HSPG2-205ENST00000427897 HOXC11O43248 304 aaPredicted RBP21.66■■□□□ 1.06
HSPG2-205ENST00000427897 PRKCSHP14314 528 aaPredicted RBP21.66■■□□□ 1.06
HSPG2-205ENST00000427897 ERCC5P28715 1186 aaPredicted RBP21.66■■□□□ 1.06
HSPG2-205ENST00000427897 HOXA6P31267 233 aa21.66■■□□□ 1.06
HSPG2-205ENST00000427897 MRPS21P82921 87 aaKnown RBP21.66■■□□□ 1.06
HSPG2-205ENST00000427897 ARHGAP44Q17R89 818 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms