RNA–Protein interactions for RNA: ENST00000427658.1

AFG3L1P-208, Transcript of AFG3 like matrix AAA peptidase subunit 1, pseudogene, human

TSL 2

Gene AFG3L1P, Length 2,758 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFG3L1P-208	ENST00000427658	GPC5	P78333	572 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	FGD3	Q5JSP0	725 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	TUBA1A	Q71U36	451 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	HEATR3	Q7Z4Q2	680 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	CHSY1	Q86X52	802 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	TTLL6	Q8N841	843 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	ATP6V0D2	Q8N8Y2	350 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SUN5	Q8TC36	379 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	NLRP4	Q96MN2	994 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	INO80B	Q9C086	356 aa	Predicted RBP	10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	RNF38	Q9H0F5	515 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	CNGB3	Q9NQW8	809 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SEL1L	Q9UBV2	794 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SERPINA10	Q9UK55	444 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	DNAJC12	Q9UKB3	198 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	ZC3H11A	O75152	810 aa	Known RBP eCLIP	10.84	□□□□□ -0.67	6e-9	■■■■■ 28.1
AFG3L1P-208	ENST00000427658	AOC1	P19801	751 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	CSE1L	P55060	971 aa	Known RBP	10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	MRPS9	P82933	396 aa	Known RBP	10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	ARHGEF6	Q15052	776 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	OXA1L	Q15070	435 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	TBCC	Q15814	346 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	TMTC4	Q5T4D3	741 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	CCDC81	Q6ZN84	652 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	DENND5B	Q6ZUT9	1274 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	EEPD1	Q7L9B9	569 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	LYSMD3	Q7Z3D4	306 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SETD3	Q86TU7	594 aa	Predicted RBP	10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SLC38A6	Q8IZM9	456 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	BBOF1	Q8ND07	529 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	EXD1	Q8NHP7	514 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SNX29	Q8TEQ0	813 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SLC35C1	Q96A29	364 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	TRIM56	Q9BRZ2	755 aa	Known RBP	10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SHCBP1L	Q9BZQ2	653 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	GPR88	Q9GZN0	384 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	WWP1	Q9H0M0	922 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	XPNPEP1	Q9NQW7	623 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	AASDHPPT	Q9NRN7	309 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	DDX56	Q9NY93	547 aa	Known RBP	10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	STRIP2	Q9ULQ0	834 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	SCN9A	Q15858	1988 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658	ZNF536	O15090	1300 aa		10.84	□□□□□ -0.67
AFG3L1P-208	ENST00000427658		H3BNH8	94 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	KPNA4	O00629	521 aa	Predicted RBP	10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	LPXN	O60711	386 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	IL1B	P01584	269 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	SERPINA6	P08185	405 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	HOXD10	P28358	340 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	ADSL	P30566	484 aa	Predicted RBP	10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	ACADSB	P45954	432 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	HNRNPF	P52597	415 aa	Known RBP	10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	GNA12	Q03113	381 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	LSM12	Q3MHD2	195 aa	Known RBP	10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	C4orf22	Q6V702	233 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	CYP2U1	Q7Z449	544 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	DEFB107A	Q8IZN7	70 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	FBXW8	Q8N3Y1	598 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	CCDC89	Q8N998	374 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	SLC20A1	Q8WUM9	679 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	CAPSL	Q8WWF8	208 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	TRUB1	Q8WWH5	349 aa	Known RBP	10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	NLRP7	Q8WX94	980 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	ACAP3	Q96P50	834 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	EBF4	Q9BQW3	602 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	RPF2	Q9H7B2	306 aa	Known RBP	10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	EPS15L1	Q9UBC2	864 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	GPSM3	Q9Y4H4	160 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	PCDHGA11	Q9Y5H2	935 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	CDK5RAP2	Q96SN8	1893 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	FOCAD	Q5VW36	1801 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	MAN1A1	P33908	653 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	CASP4	P49662	377 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	PRKG1	Q13976	671 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	ZBED5	Q49AG3	693 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	FAM47A	Q5JRC9	791 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	DPP8	Q6V1X1	898 aa	Predicted RBP	10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	CHERP	Q8IWX8	916 aa	Known RBP	10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	DAGLB	Q8NCG7	672 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	ADCY4	Q8NFM4	1077 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	MZB1	Q8WU39	189 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	MED30	Q96HR3	178 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	PSD2	Q9BQI7	771 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	COPS7B	Q9H9Q2	264 aa	Predicted RBP	10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	OLAH	Q9NV23	265 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	DAPK2	Q9UIK4	370 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	DNAJC16	Q9Y2G8	782 aa		10.83	□□□□□ -0.68
AFG3L1P-208	ENST00000427658		H3BMQ9	156 aa		10.82	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	ZNF701	M0R085	212 aa	Predicted RBP	10.82	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	GIPC1	O14908	333 aa		10.82	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	CLOCK	O15516	846 aa		10.82	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	PARN	O95453	639 aa	Known RBP	10.82	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	RPL10	P27635	214 aa	Known RBP	10.82	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	STAT3	P40763	770 aa		10.82	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	ADGRE1	Q14246	886 aa		10.82	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	GRIK5	Q16478	980 aa		10.82	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	CCDC58	Q4VC31	144 aa		10.82	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	EFHC2	Q5JST6	749 aa		10.82	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	ANKRD26P1	Q6NSI1	321 aa		10.82	□□□□□ -0.68
AFG3L1P-208	ENST00000427658	ZNF746	Q6NUN9	644 aa	Predicted RBP	10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms