RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 DNAJB2P25686 324 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 CYB5R4Q7L1T6 521 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 FAM71DQ8N9W8 422 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 PADI4Q9UM07 663 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.86□□□□□ -0.03
PTPN13-203ENST00000427191 DYNC1LI2O43237 492 aaPredicted RBP14.86□□□□□ -0.03
PTPN13-203ENST00000427191 ECE2O60344 883 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 ZNF682O95780 498 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 NCAM1P13591 858 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 ITGA4P13612 1032 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 PRKAA1Q13131 559 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 ZNF177Q13360 481 aaPredicted RBP14.86□□□□□ -0.03
PTPN13-203ENST00000427191 ATF7IP2Q5U623 682 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 KDELC2Q7Z4H8 507 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 SLC13A5Q86YT5 568 aaPredicted RBP14.86□□□□□ -0.03
PTPN13-203ENST00000427191 SLC30A5Q8TAD4 765 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 NARS2Q96I59 477 aaKnown RBP14.86□□□□□ -0.03
PTPN13-203ENST00000427191 RIT2Q99578 217 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 ZCCHC2Q9C0B9 1178 aaKnown RBP14.86□□□□□ -0.03
PTPN13-203ENST00000427191 ELOVL6Q9H5J4 265 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 ALG6Q9Y672 507 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 A0A088AWK7 358 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 CYP2D6P10635 497 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 ZNF10P21506 573 aaPredicted RBP14.86□□□□□ -0.03
PTPN13-203ENST00000427191 RAB2AP61019 212 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 DNAJC3Q13217 504 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 TYW3Q6IPR3 259 aaKnown RBP14.86□□□□□ -0.03
PTPN13-203ENST00000427191 TMPRSS6Q8IU80 811 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 TMEM132CQ8N3T6 1108 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 Q96MT0 163 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 ADPRHL2Q9NX46 363 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 FAM20BO75063 409 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 NPR3P17342 541 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 FXR2P51116 673 aaKnown RBP eCLIP14.86□□□□□ -0.03
PTPN13-203ENST00000427191 GOLGA7BQ2TAP0 167 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 FAM111AQ96PZ2 611 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 C6orf62Q9GZU0 229 aaPredicted RBP14.86□□□□□ -0.03
PTPN13-203ENST00000427191 ASAP1Q9ULH1 1129 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 MYH10P35580 1976 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 USP27XA6NNY8 438 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 CDK7P50613 346 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 DGKKQ5KSL6 1271 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 ACAD10Q6JQN1 1059 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 TTC27Q6P3X3 843 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 HPDLQ96IR7 371 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 REEP2Q9BRK0 252 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 GGT7Q9UJ14 662 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 DUSP12Q9UNI6 340 aa14.86□□□□□ -0.03
PTPN13-203ENST00000427191 PHGDHO43175 533 aaKnown RBP14.85□□□□□ -0.03
PTPN13-203ENST00000427191 NFICP08651 508 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 CPT1AP50416 773 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 CCZ1BP86790 482 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 CCZ1P86791 482 aaPredicted RBP14.85□□□□□ -0.03
PTPN13-203ENST00000427191 ALFQ53S48 1182 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 SLC26A11Q86WA9 606 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 CHSY1Q86X52 802 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 COMMD9Q9P000 198 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 GTF2A1LQ9UNN4 478 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 UBE2QL1A1L167 161 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 F8VZ95 297 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 MGRN1O60291 552 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 GZMAP12544 262 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 C21orf59P57076 290 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 AMPD2Q01433 879 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 SAMD4BQ5PRF9 694 aaKnown RBP14.85□□□□□ -0.03
PTPN13-203ENST00000427191 CCDC36Q8IYA8 594 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 FAM120BQ96EK7 910 aaKnown RBP14.85□□□□□ -0.03
PTPN13-203ENST00000427191 PRKD2Q9BZL6 878 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 TUBA8Q9NY65 449 aaPredicted RBP14.85□□□□□ -0.03
PTPN13-203ENST00000427191 SORCS3Q9UPU3 1222 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 SH3GLB1Q9Y371 365 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 F5H5T6 163 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 CRABP2P29373 138 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 NR2C2P49116 596 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 ZNF284Q2VY69 593 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 ACTRT2Q8TDY3 377 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 WDCPQ9H6R7 721 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 RRN3Q9NYV6 651 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 CARNS1A5YM72 827 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 ATG7O95352 703 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 PGBD3Q8N328 593 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 RNPEPQ9H4A4 650 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 ARIH1Q9Y4X5 557 aaPredicted RBP14.85□□□□□ -0.03
PTPN13-203ENST00000427191 CES2O00748 559 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 HOXC6P09630 235 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 ZNF135P52742 658 aaPredicted RBP14.85□□□□□ -0.03
PTPN13-203ENST00000427191 GPAT2Q6NUI2 795 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 ARHGAP22Q7Z5H3 698 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 MCCC1Q96RQ3 725 aaPredicted RBP14.85□□□□□ -0.03
PTPN13-203ENST00000427191 V9GYQ6 96 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 MAP3K4Q9Y6R4 1608 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 GUCY1B2O75343 617 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 ERN1O75460 977 aaKnown RBP14.85□□□□□ -0.03
PTPN13-203ENST00000427191 EPB42P16452 691 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 ACADLP28330 430 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 SKIV2L2P42285 1042 aaKnown RBP14.85□□□□□ -0.03
PTPN13-203ENST00000427191 CENPIQ92674 756 aaPredicted RBP14.85□□□□□ -0.03
PTPN13-203ENST00000427191 C8orf4Q9NR00 106 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 ARHGAP28Q9P2N2 729 aa14.85□□□□□ -0.03
PTPN13-203ENST00000427191 ERBB3P21860 1342 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms