RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 NOTUMQ6P988 496 aa16.58■□□□□ 0.24
PKP4-205ENST00000426248 OR5B17Q8NGF7 314 aa16.58■□□□□ 0.24
PKP4-205ENST00000426248 SYN2Q92777 582 aaPredicted RBP16.58■□□□□ 0.24
PKP4-205ENST00000426248 CLPTM1LQ96KA5 538 aa16.58■□□□□ 0.24
PKP4-205ENST00000426248 NTPCRQ9BSD7 190 aaKnown RBP16.58■□□□□ 0.24
PKP4-205ENST00000426248 PLVAPQ9BX97 442 aa16.58■□□□□ 0.24
PKP4-205ENST00000426248 SNTG2Q9NY99 539 aa16.58■□□□□ 0.24
PKP4-205ENST00000426248 IL1RAPL1Q9NZN1 696 aa16.58■□□□□ 0.24
PKP4-205ENST00000426248 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.58■□□□□ 0.24
PKP4-205ENST00000426248 SGPL1O95470 568 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 C1orf228Q6PIY5 440 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 C17orf99Q6UX52 265 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 PALB2Q86YC2 1186 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 SLC20A1Q8WUM9 679 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 PYDC1Q8WXC3 89 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 FIZ1Q96SL8 496 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 BRD8Q9H0E9 1235 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 PRDM16Q9HAZ2 1276 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 RBAK-RBAKDNI3L0D1 243 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 GSC2O15499 205 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 NOL4O94818 638 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 ATF7P17544 494 aaPredicted RBP16.57■□□□□ 0.24
PKP4-205ENST00000426248 CYTH1Q15438 398 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 TSHZ1Q6ZSZ6 1077 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 ACO2Q99798 780 aaKnown RBP16.57■□□□□ 0.24
PKP4-205ENST00000426248 SAYSD1Q9NPB0 183 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 STX18Q9P2W9 335 aaKnown RBP16.57■□□□□ 0.24
PKP4-205ENST00000426248 ALG6Q9Y672 507 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 ZMYM2Q9UBW7 1377 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 XPOTO43592 962 aaKnown RBP16.57■□□□□ 0.24
PKP4-205ENST00000426248 CYP1A1P04798 512 aaPredicted RBP16.57■□□□□ 0.24
PKP4-205ENST00000426248 ZNF24P17028 368 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 POLR2BP30876 1174 aaKnown RBP16.57■□□□□ 0.24
PKP4-205ENST00000426248 CHKAP35790 457 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 TMCO4Q5TGY1 634 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 LRRC57Q8N9N7 239 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 CPA5Q8WXQ8 436 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 ATG4AQ8WYN0 398 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 TMEM134Q9H6X4 195 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 FLRT1Q9NZU1 646 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 IKBKGQ9Y6K9 419 aa16.57■□□□□ 0.24
PKP4-205ENST00000426248 ATMINO43313 823 aaPredicted RBP16.56■□□□□ 0.24
PKP4-205ENST00000426248 ANPEPP15144 967 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 ITGA8P53708 1063 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 ZNF467Q7Z7K2 595 aaPredicted RBP16.56■□□□□ 0.24
PKP4-205ENST00000426248 ICA1LQ8NDH6 482 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 CDT1Q9H211 546 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 EPB41L4BQ9H329 900 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 C2orf71A6NGG8 1288 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 P4HA2O15460 535 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 ASMTLO95671 621 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 ARF4P18085 180 aaPredicted RBP16.56■□□□□ 0.24
PKP4-205ENST00000426248 MARCKSL1P49006 195 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 PABPC1LQ4VXU2 614 aaKnown RBP16.56■□□□□ 0.24
PKP4-205ENST00000426248 SLC47A2Q86VL8 602 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 KBTBD2Q8IY47 623 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 TRIML2Q8N7C3 387 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 PPP1R14CQ8TAE6 165 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 HEMGNQ9BXL5 484 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 THAP2Q9H0W7 228 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 MINDY3Q9H8M7 445 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 TTC7AQ9ULT0 858 aaPredicted RBP16.56■□□□□ 0.24
PKP4-205ENST00000426248 PHIPQ8WWQ0 1821 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 ARHGAP10A1A4S6 786 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 GTPBP10A4D1E9 387 aaKnown RBP16.56■□□□□ 0.24
PKP4-205ENST00000426248 NDC80O14777 642 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 C22orf31O95567 290 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 IFNB1P01574 187 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 AMHR2Q16671 573 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 CLNKQ7Z7G1 428 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 LRRC6Q86X45 466 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 ABI1Q8IZP0 508 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 STKLD1Q8NE28 680 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 BEST2Q8NFU1 509 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 KRT35Q92764 455 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 GATA6Q92908 595 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 TUBB6Q9BUF5 446 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 DMAC2Q9NW81 257 aa16.56■□□□□ 0.24
PKP4-205ENST00000426248 MARSP56192 900 aaKnown RBP16.55■□□□□ 0.24
PKP4-205ENST00000426248 CDC42EP1Q00587 391 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 DMPKQ09013 629 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 CCDC15Q0P6D6 951 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 TRIM32Q13049 653 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 LPCAT4Q643R3 524 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 ATP11CQ8NB49 1132 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 HESX1Q9UBX0 185 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 MARCOQ9UEW3 520 aaPredicted RBP16.55■□□□□ 0.24
PKP4-205ENST00000426248 STARD13Q9Y3M8 1113 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 TTLL13PA6NNM8 815 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 NFKBIAP25963 317 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 TBL3Q12788 808 aaKnown RBP16.55■□□□□ 0.24
PKP4-205ENST00000426248 KIAA0100Q14667 2235 aaKnown RBP16.55■□□□□ 0.24
PKP4-205ENST00000426248 SPDYCQ5MJ68 293 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 CGB2Q6NT52 195 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 ALG3Q92685 438 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 CGRRF1Q99675 332 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 MRPL1Q9BYD6 325 aaKnown RBP16.55■□□□□ 0.24
PKP4-205ENST00000426248 ST6GALNAC4Q9H4F1 302 aa16.55■□□□□ 0.24
PKP4-205ENST00000426248 HMX1Q9NP08 348 aaPredicted RBP16.55■□□□□ 0.24
PKP4-205ENST00000426248 WDR37Q9Y2I8 494 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms