RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 CACNG4Q9UBN1 327 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 WASF2Q9Y6W5 498 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 ADGRA2Q96PE1 1338 aa13.91□□□□□ -0.18
USP42-203ENST00000426246 TCRBV9S1A1TA0A576 114 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 EDF1O60869 148 aaKnown RBP13.9□□□□□ -0.18
USP42-203ENST00000426246 GM2AP17900 193 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 TAPT1Q6NXT6 567 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 PCGF5Q86SE9 256 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 DNAAF3Q8N9W5 541 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 KIF12Q96FN5 646 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 MINDY3Q9H8M7 445 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 TMPRSS4Q9NRS4 437 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 IQANK1A0A1B0GTG1 560 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 CXorf49A8MYA2 514 aaPredicted RBP13.9□□□□□ -0.18
USP42-203ENST00000426246 GSTA1P08263 222 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 TXNP10599 105 aaKnown RBP13.9□□□□□ -0.18
USP42-203ENST00000426246 KDELR1P24390 212 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 CDKN2BP42772 138 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 RASIP1Q5U651 963 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 EMC10Q5UCC4 262 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 RGS9BPQ6ZS82 235 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 ZNF354CQ86Y25 554 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 DNAJC9Q8WXX5 260 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 UTP4Q969X6 686 aaKnown RBP13.9□□□□□ -0.18
USP42-203ENST00000426246 IFT122Q9HBG6 1241 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 CYTH4Q9UIA0 394 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 COQ4Q9Y3A0 265 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 CLUHO75153 1309 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 ADORA2AP29274 412 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 PIGHQ14442 188 aaPredicted RBP13.9□□□□□ -0.18
USP42-203ENST00000426246 CCDC142Q17RM4 750 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 KIZQ2M2Z5 673 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 PLEKHA7Q6IQ23 1121 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 C2orf69Q8N8R5 385 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 SMC1BQ8NDV3 1235 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 FBXO27Q8NI29 283 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 TTC25Q96NG3 672 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 SRPK1Q96SB4 655 aaKnown RBP13.9□□□□□ -0.18
USP42-203ENST00000426246 PRM3Q9NNZ6 103 aa13.9□□□□□ -0.18
USP42-203ENST00000426246 AVENQ9NQS1 362 aaPredicted RBP13.9□□□□□ -0.18
USP42-203ENST00000426246 A6NJR5 290 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 KCNK1O00180 336 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 FCHO1O14526 889 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 CYP1A1P04798 512 aaPredicted RBP13.89□□□□□ -0.19
USP42-203ENST00000426246 KRT7P08729 469 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 ARL2P36404 184 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 DPYSL3Q14195 570 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 C6orf163Q5TEZ5 329 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 VWA5B1Q5TIE3 1220 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 JADE1Q6IE81 842 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 CDHR3Q6ZTQ4 885 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 GGA2Q9UJY4 613 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 DOCK3Q8IZD9 2030 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 A0A0B4J269 797 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 KLRC2P26717 231 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 NDST1P52848 882 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 GRM1Q13255 1194 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 KLF1Q13351 362 aaPredicted RBP13.89□□□□□ -0.19
USP42-203ENST00000426246 RASA2Q15283 850 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 FAM160B1Q5W0V3 765 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 ARMCX2Q7L311 632 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 FAM172AQ8WUF8 416 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 SEPT1Q8WYJ6 367 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 HPDLQ96IR7 371 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 LACTBL1A8MY62 500 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 CIB2O75838 187 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 SLC25A3Q00325 362 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 C1QBPQ07021 282 aaKnown RBP13.89□□□□□ -0.19
USP42-203ENST00000426246 MORF4L2Q15014 288 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 CA9Q16790 459 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 RNASEH2BQ5TBB1 312 aaKnown RBP13.89□□□□□ -0.19
USP42-203ENST00000426246 RNF220Q5VTB9 566 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 SNX30Q5VWJ9 437 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 TRIM72Q6ZMU5 477 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 CLNKQ7Z7G1 428 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 WDTC1Q8N5D0 677 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 USP33Q8TEY7 942 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 WDR60Q8WVS4 1066 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 PYDC1Q8WXC3 89 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 HESX1Q9UBX0 185 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 SMG5Q9UPR3 1016 aaKnown RBP13.89□□□□□ -0.19
USP42-203ENST00000426246 MFHAS1Q9Y4C4 1052 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 ZSWIM8A7E2V4 1837 aa13.89□□□□□ -0.19
USP42-203ENST00000426246 OGTO15294 1046 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 ADCY3O60266 1144 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 MICAL2O94851 1124 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 MT-CO1P00395 513 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 TFE3P19532 575 aaPredicted RBP13.88□□□□□ -0.19
USP42-203ENST00000426246 NAMPTP43490 491 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 SNRPFP62306 86 aaKnown RBP13.88□□□□□ -0.19
USP42-203ENST00000426246 GRB14Q14449 540 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 ZNF268Q14587 947 aaPredicted RBP13.88□□□□□ -0.19
USP42-203ENST00000426246 PDK4Q16654 411 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 TCHHL1Q5QJ38 904 aaPredicted RBP13.88□□□□□ -0.19
USP42-203ENST00000426246 SYDE1Q6ZW31 735 aaPredicted RBP13.88□□□□□ -0.19
USP42-203ENST00000426246 CLEC4CQ8WTT0 213 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 SGF29Q96ES7 293 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 RABGEF1Q9UJ41 708 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 hCG_2014768A0A024R1R8 64 aa13.88□□□□□ -0.19
USP42-203ENST00000426246 RBM47A0AV96 593 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms