RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.86■□□□□ 0.132e-30■■■□□ 14.8
ACTB-204ENST00000425660 SPATA2LQ8IUW3 424 aaPredicted RBP15.86■□□□□ 0.13
ACTB-204ENST00000425660 PSTKQ8IV42 348 aaKnown RBP15.86■□□□□ 0.13
ACTB-204ENST00000425660 DCP1BQ8IZD4 617 aaKnown RBP15.86■□□□□ 0.13
ACTB-204ENST00000425660 FAF2Q96CS3 445 aa15.86■□□□□ 0.13
ACTB-204ENST00000425660 PGAP3Q96FM1 320 aaPredicted RBP15.86■□□□□ 0.13
ACTB-204ENST00000425660 ZNF670Q9BS34 389 aa15.86■□□□□ 0.13
ACTB-204ENST00000425660 CALN1Q9BXU9 219 aa15.86■□□□□ 0.13
ACTB-204ENST00000425660 DPH5Q9H2P9 285 aa15.86■□□□□ 0.13
ACTB-204ENST00000425660 HCSTQ9UBK5 93 aa15.86■□□□□ 0.13
ACTB-204ENST00000425660 DNPEPQ9ULA0 475 aa15.86■□□□□ 0.13
ACTB-204ENST00000425660 NLRC5Q86WI3 1866 aa15.86■□□□□ 0.13
ACTB-204ENST00000425660 MICAL3Q7RTP6 2002 aa15.85■□□□□ 0.13
ACTB-204ENST00000425660 PTPRDP23468 1912 aa15.85■□□□□ 0.13
ACTB-204ENST00000425660 APOC4-APOC2K7ER74 178 aa15.85■□□□□ 0.13
ACTB-204ENST00000425660 DGKIO75912 1065 aa15.85■□□□□ 0.13
ACTB-204ENST00000425660 EFEMP2O95967 443 aa15.85■□□□□ 0.13
ACTB-204ENST00000425660 APOC2P02655 101 aa15.85■□□□□ 0.13
ACTB-204ENST00000425660 USP17L7P0C7H9 530 aa15.85■□□□□ 0.13
ACTB-204ENST00000425660 RPL21P46778 160 aaKnown RBP15.85■□□□□ 0.13
ACTB-204ENST00000425660 RABGGTBP53611 331 aa15.85■□□□□ 0.13
ACTB-204ENST00000425660 PPP1R7Q15435 360 aa15.85■□□□□ 0.13
ACTB-204ENST00000425660 FAM171A1Q5VUB5 890 aa15.85■□□□□ 0.13
ACTB-204ENST00000425660 SYPL2Q5VXT5 272 aa15.85■□□□□ 0.13
ACTB-204ENST00000425660 FUT10Q6P4F1 479 aa15.85■□□□□ 0.13
ACTB-204ENST00000425660 HFE2Q6ZVN8 426 aa15.85■□□□□ 0.13
ACTB-204ENST00000425660 BEND5Q7L4P6 421 aa15.85■□□□□ 0.13
ACTB-204ENST00000425660 TRIM31Q9BZY9 425 aa15.85■□□□□ 0.13
ACTB-204ENST00000425660 PCDH18Q9HCL0 1135 aa15.85■□□□□ 0.13
ACTB-204ENST00000425660 RRN3Q9NYV6 651 aa15.85■□□□□ 0.13
ACTB-204ENST00000425660 SNX24Q9Y343 169 aa15.85■□□□□ 0.13
ACTB-204ENST00000425660 KIAA0100Q14667 2235 aaKnown RBP15.85■□□□□ 0.13
ACTB-204ENST00000425660 ABHD14A-ACY1A0A1B0GW23 586 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 OR6C75A6NL08 312 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 TNFRSF10BO14763 440 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 TBC1D4O60343 1298 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 LTFP02788 710 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 ITGAVP06756 1048 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 IVDP26440 423 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 SULT1E1P49888 294 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 ATXN1P54253 815 aaKnown RBP15.84■□□□□ 0.13
ACTB-204ENST00000425660 VCPP55072 806 aaKnown RBP15.84■□□□□ 0.13
ACTB-204ENST00000425660 SLC39A12Q504Y0 691 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 ZC3H12AQ5D1E8 599 aaKnown RBP15.84■□□□□ 0.13
ACTB-204ENST00000425660 VSTM1Q6UX27 236 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 ZDHHC24Q6UX98 284 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 RNF157Q96PX1 679 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 SLC9A7Q96T83 725 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 FAM118BQ9BPY3 351 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 FNDC1Q4ZHG4 1894 aaPredicted RBP15.84■□□□□ 0.13
ACTB-204ENST00000425660 KIAA0355O15063 1070 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 TP73O15350 636 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 TIMP1P01033 207 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 OR4Q2P0C623 313 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 RDXP35241 583 aaKnown RBP15.84■□□□□ 0.13
ACTB-204ENST00000425660 HSPA9P38646 679 aaKnown RBP15.84■□□□□ 0.13
ACTB-204ENST00000425660 BCAR1P56945 870 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 TFDP2Q14188 446 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 CA9Q16790 459 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 ZNF280DQ6N043 979 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 TMEM173Q86WV6 379 aaPredicted RBP15.84■□□□□ 0.13
ACTB-204ENST00000425660 KRT222Q8N1A0 295 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 CCDC89Q8N998 374 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 ACTL9Q8TC94 416 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 TOP1MTQ969P6 601 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 CCDC114Q96M63 670 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 FMO2Q99518 471 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 OXCT2Q9BYC2 517 aaPredicted RBP15.84■□□□□ 0.13
ACTB-204ENST00000425660 MTMR10Q9NXD2 777 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 WHRNQ9P202 907 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 NAALADL1Q9UQQ1 740 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 COL4A6Q14031 1691 aa15.84■□□□□ 0.13
ACTB-204ENST00000425660 CYP2F1P24903 491 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 ITGB8P26012 769 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 KLRC2P26717 231 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 L1CAMP32004 1257 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 MAGEA11P43364 429 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 AIF1P55008 147 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 PITX1P78337 314 aaPredicted RBP15.83■□□□□ 0.12
ACTB-204ENST00000425660 OTUD4Q01804 1114 aaKnown RBP15.83■□□□□ 0.12
ACTB-204ENST00000425660 MMRN1Q13201 1228 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 KRT81Q14533 505 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 CTXN3Q4LDR2 81 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 SLC9A4Q6AI14 798 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 NECAB2Q7Z6G3 386 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 ALLCQ8N6M5 410 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 CCDC185Q8N715 623 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 TSEN2Q8NCE0 465 aaKnown RBP15.83■□□□□ 0.12
ACTB-204ENST00000425660 FBXO25Q8TCJ0 367 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 CCHCR1Q8TD31 782 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 ART4Q93070 314 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 TRIM62Q9BVG3 475 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 ACBD3Q9H3P7 528 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 AP4E1Q9UPM8 1137 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 VWA8A3KMH1 1905 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 LTBP2Q14767 1821 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 PATJQ8NI35 1801 aa15.83■□□□□ 0.12
ACTB-204ENST00000425660 TRIM43BA6NCK2 446 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 M0QYT0 321 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 CAPN9O14815 690 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms