RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 P2RY2P41231 377 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 TNFRSF4P43489 277 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 ASPAP45381 313 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 GCLMP48507 274 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 TUBP50607 506 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 NDST1P52848 882 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 AP3M2P53677 418 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 CREB5Q02930 508 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 DCAF17Q5H9S7 520 aaPredicted RBP13.72□□□□□ -0.21
VRK3-203ENST00000424804 ZNF667Q5HYK9 610 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 HECTD3Q5T447 861 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 TCERG1LQ5VWI1 586 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 ANKRD40Q6AI12 368 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 IL31Q6EBC2 164 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 ANO7Q6IWH7 933 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 INTS8Q75QN2 995 aaKnown RBP13.72□□□□□ -0.21
VRK3-203ENST00000424804 GPRIN1Q7Z2K8 1008 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 TMEM25Q86YD3 366 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 MIB1Q86YT6 1006 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 BBS7Q8IWZ6 715 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 C12orf29Q8N999 325 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 TXNDC5Q8NBS9 432 aaKnown RBP13.72□□□□□ -0.21
VRK3-203ENST00000424804 PDZD8Q8NEN9 1154 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 TMC2Q8TDI7 906 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 DDX1Q92499 740 aaKnown RBP13.72□□□□□ -0.21
VRK3-203ENST00000424804 KLF16Q9BXK1 252 aaPredicted RBP13.72□□□□□ -0.21
VRK3-203ENST00000424804 APOBEC3GQ9HC16 384 aaKnown RBP13.72□□□□□ -0.21
VRK3-203ENST00000424804 WASF3Q9UPY6 502 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 CTNND2Q9UQB3 1225 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 ASPMQ8IZT6 3477 aa13.72□□□□□ -0.21
VRK3-203ENST00000424804 LNP1A1A4G5 178 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 AP1G2O75843 785 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 TBX18O95935 607 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 CD44P16070 742 aaKnown RBP13.71□□□□□ -0.21
VRK3-203ENST00000424804 GRIA2P42262 883 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 PMS1P54277 932 aaKnown RBP13.71□□□□□ -0.21
VRK3-203ENST00000424804 STX17P56962 302 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 SHC2P98077 582 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 ELF2Q15723 593 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 NFIL3Q16649 462 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 SGSM1Q2NKQ1 1148 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 EDRF1Q3B7T1 1238 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 MAP7D1Q3KQU3 841 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 ZCWPW2Q504Y3 356 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 USP39Q53GS9 565 aaKnown RBP13.71□□□□□ -0.21
VRK3-203ENST00000424804 HTR3DQ70Z44 454 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 DDX42Q86XP3 938 aaKnown RBP eCLIP13.71□□□□□ -0.21
VRK3-203ENST00000424804 CCDC26Q8TAB7 109 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 SPATA20Q8TB22 786 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 SLC2A14Q8TDB8 520 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 WHAMMQ8TF30 809 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 RLN3Q8WXF3 142 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 OTUB2Q96DC9 234 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 SMARCD1Q96GM5 515 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 IPO9Q96P70 1041 aaKnown RBP13.71□□□□□ -0.21
VRK3-203ENST00000424804 GTPBP4Q9BZE4 634 aaKnown RBP13.71□□□□□ -0.21
VRK3-203ENST00000424804 DMAP1Q9NPF5 467 aaPredicted RBP13.71□□□□□ -0.21
VRK3-203ENST00000424804 TBC1D14Q9P2M4 693 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 CHD6Q8TD26 2715 aa13.71□□□□□ -0.21
VRK3-203ENST00000424804 C4orf47A7E2U8 309 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 GIPC1O14908 333 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 IKBKBO14920 756 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 MAPK13O15264 365 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 TULP3O75386 442 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 ADH1CP00326 375 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 HLA-DRAP01903 254 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 APODP05090 189 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 MAP3K7CLP57077 242 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 IRX4P78413 519 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 GAD2Q05329 585 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 KDSRQ06136 332 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 PPP3CAQ08209 521 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 INCA1Q0VD86 236 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 HSF5Q4G112 596 aaPredicted RBP13.7□□□□□ -0.22
VRK3-203ENST00000424804 RNF43Q68DV7 783 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 CLEC20AQ6ZU45 233 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 UNC93AQ86WB7 457 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 ELOA2Q8IYF1 753 aaPredicted RBP13.7□□□□□ -0.22
VRK3-203ENST00000424804 NAT16Q8N8M0 369 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 NELFBQ8WX92 580 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 TNIP3Q96KP6 325 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 GBP4Q96PP9 640 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 MED10Q9BTT4 135 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 IMPG2Q9BZV3 1241 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 NMUR1Q9HB89 426 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 ARHGEF4Q9NR80 690 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 SPHK2Q9NRA0 654 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 KRT82Q9NSB4 513 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 TMEM74BQ9NUR3 256 aa13.7□□□□□ -0.22
VRK3-203ENST00000424804 CACNA1EQ15878 2313 aa13.69□□□□□ -0.22
VRK3-203ENST00000424804 A0A1W2PQF6 199 aa13.69□□□□□ -0.22
VRK3-203ENST00000424804 CISD3P0C7P0 127 aa13.69□□□□□ -0.22
VRK3-203ENST00000424804 P4HA1P13674 534 aa13.69□□□□□ -0.22
VRK3-203ENST00000424804 GBP1P32455 592 aa13.69□□□□□ -0.22
VRK3-203ENST00000424804 FKBP3Q00688 224 aaKnown RBP13.69□□□□□ -0.22
VRK3-203ENST00000424804 LRRC63Q05C16 580 aa13.69□□□□□ -0.22
VRK3-203ENST00000424804 MORC3Q14149 939 aa13.69□□□□□ -0.22
VRK3-203ENST00000424804 CCDC40Q4G0X9 1142 aa13.69□□□□□ -0.22
VRK3-203ENST00000424804 COBLL1Q53SF7 1204 aa13.69□□□□□ -0.22
VRK3-203ENST00000424804 SCD5Q86SK9 330 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms