RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 ZBTB45Q96K62 511 aaPredicted RBP6.75□□□□□ -1.33
SDCBP-203ENST00000424270 MYRFLQ96LU7 910 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 HSD17B14Q9BPX1 270 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 BBS2Q9BXC9 721 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 TRIM9Q9C026 710 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 MKRN2Q9H000 416 aaKnown RBP6.75□□□□□ -1.33
SDCBP-203ENST00000424270 GZF1Q9H116 711 aaPredicted RBP6.75□□□□□ -1.33
SDCBP-203ENST00000424270 PCED1AQ9H1Q7 454 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 RWDD1Q9H446 243 aaPredicted RBP6.75□□□□□ -1.33
SDCBP-203ENST00000424270 PLEKHA5Q9HAU0 1116 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 SPHK2Q9NRA0 654 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 EHD2Q9NZN4 543 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 SATB2Q9UPW6 733 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 STARD13Q9Y3M8 1113 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 PTPRJQ12913 1337 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 VPS37CA5D8V6 355 aaPredicted RBP6.74□□□□□ -1.33
SDCBP-203ENST00000424270 LACTBL1A8MY62 500 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 GFRA2O00451 464 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 CPLX1O14810 134 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 HOXC11O43248 304 aaPredicted RBP6.74□□□□□ -1.33
SDCBP-203ENST00000424270 DXOO77932 396 aaKnown RBP6.74□□□□□ -1.33
SDCBP-203ENST00000424270 CYP11A1P05108 521 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 EPHX1P07099 455 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 CLTAP09496 248 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 PFKLP17858 780 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 ITGB6P18564 788 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 ACAT1P24752 427 aaKnown RBP6.74□□□□□ -1.33
SDCBP-203ENST00000424270 EPHA8P29322 1005 aaPredicted RBP6.74□□□□□ -1.33
SDCBP-203ENST00000424270 TAF6P49848 677 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 CCT2P78371 535 aaKnown RBP6.74□□□□□ -1.33
SDCBP-203ENST00000424270 SLC7A9P82251 487 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 ZXDBP98169 803 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 GRIN1Q05586 938 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 NAA30Q147X3 362 aaPredicted RBP6.74□□□□□ -1.33
SDCBP-203ENST00000424270 SLC45A4Q5BKX6 768 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 C9orf57Q5W0N0 161 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 ZNF787Q6DD87 383 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 GALNT17Q6IS24 598 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 TPGS1Q6ZTW0 290 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 TMC6Q7Z403 805 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 TMEM25Q86YD3 366 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 JAMLQ86YT9 394 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 SPNS2Q8IVW8 549 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 CACTIN-AS1Q8N1I8 211 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 ERMNQ8TAM6 284 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 ZNF564Q8TBZ8 553 aaPredicted RBP6.74□□□□□ -1.33
SDCBP-203ENST00000424270 SAP25Q8TEE9 199 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 RFFLQ8WZ73 363 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 BRF1Q92994 677 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 OTUB2Q96DC9 234 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 SLC6A18Q96N87 628 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 BTBD1Q9H0C5 482 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 LHX5Q9H2C1 402 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 ZNF768Q9H5H4 540 aaKnown RBP6.74□□□□□ -1.33
SDCBP-203ENST00000424270 PTPRHQ9HD43 1115 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 ABCB6Q9NP58 842 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 TMLHEQ9NVH6 421 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 ANK1P16157 1881 aa6.74□□□□□ -1.33
SDCBP-203ENST00000424270 PRRT4C9JH25 899 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 VILLO15195 856 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 SLC16A4O15374 487 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 PAPSS1O43252 624 aaPredicted RBP6.73□□□□□ -1.33
SDCBP-203ENST00000424270 SDC3O75056 442 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 TOM1L1O75674 476 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 PPP1R37O75864 691 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 DNTTP04053 509 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 CENPBP07199 599 aaPredicted RBP6.73□□□□□ -1.33
SDCBP-203ENST00000424270 TYRP14679 529 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 XBP1P17861 261 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 ACSL1P33121 698 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 NPTX2P47972 431 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 RACK1P63244 317 aaKnown RBP6.73□□□□□ -1.33
SDCBP-203ENST00000424270 CYP27A1Q02318 531 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 NUCB1Q02818 461 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 CLN3Q13286 438 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 PDIA5Q14554 519 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 TMEM132DQ14C87 1099 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 SV2CQ496J9 727 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 TTC22Q5TAA0 569 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 FHL5Q5TD97 284 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 TDRD10Q5VZ19 366 aaKnown RBP6.73□□□□□ -1.33
SDCBP-203ENST00000424270 SERPINA13PQ6UXR4 307 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 Q6ZUG5 572 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 DENND5BQ6ZUT9 1274 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 ZC3H18Q86VM9 953 aaKnown RBP6.73□□□□□ -1.33
SDCBP-203ENST00000424270 CCDC83Q8IWF9 413 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 BBS7Q8IWZ6 715 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 ETFBKMTQ8IXQ9 262 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 KIAA1958Q8N8K9 716 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 C1orf216Q8TAB5 229 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 SLITRK1Q96PX8 696 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 SEMA3CQ99985 751 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 RNF38Q9H0F5 515 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 TUFT1Q9NNX1 390 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 OSGEPQ9NPF4 335 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 ASCL3Q9NQ33 180 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 EVA1BQ9NVM1 165 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 DDX43Q9NXZ2 648 aaKnown RBP6.73□□□□□ -1.33
SDCBP-203ENST00000424270 WDR35Q9P2L0 1181 aa6.73□□□□□ -1.33
SDCBP-203ENST00000424270 GTF3C4Q9UKN8 822 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms