RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 RALAP11233 206 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 FMO1Q01740 532 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 MTF1Q14872 753 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 MSANTD2Q6P1R3 559 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 SARM1Q6SZW1 724 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 HFE2Q6ZVN8 426 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 DDX42Q86XP3 938 aaKnown RBP eCLIP19.36■□□□□ 0.69
HDAC6-205ENST00000423941 FMNL3Q8IVF7 1028 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 TMEM35BQ8NCS4 154 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 OLIG1Q8TAK6 271 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 CLEC4CQ8WTT0 213 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 SLC20A1Q8WUM9 679 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 IQCDQ96DY2 449 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 PPP1R13BQ96KQ4 1090 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 GKN1Q9NS71 199 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 ABCC13Q9NSE7 274 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 TJP2Q9UDY2 1190 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 DNMT3LQ9UJW3 386 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 E2F8A0AVK6 867 aa19.35■□□□□ 0.69
HDAC6-205ENST00000423941 TMEM221A6NGB7 291 aa19.35■□□□□ 0.69
HDAC6-205ENST00000423941 M0R296 226 aa19.35■□□□□ 0.69
HDAC6-205ENST00000423941 PIK3R2O00459 728 aa19.35■□□□□ 0.69
HDAC6-205ENST00000423941 SART1O43290 800 aaKnown RBP19.35■□□□□ 0.69
HDAC6-205ENST00000423941 MBL2P11226 248 aaPredicted RBP19.35■□□□□ 0.69
HDAC6-205ENST00000423941 GLULP15104 373 aa19.35■□□□□ 0.69
HDAC6-205ENST00000423941 FERP16591 822 aa19.35■□□□□ 0.69
HDAC6-205ENST00000423941 PRKCIP41743 596 aa19.35■□□□□ 0.69
HDAC6-205ENST00000423941 STARD6P59095 220 aa19.35■□□□□ 0.69
HDAC6-205ENST00000423941 NOMO3P69849 1222 aa19.35■□□□□ 0.69
HDAC6-205ENST00000423941 PTPN20Q4JDL3 420 aa19.35■□□□□ 0.69
HDAC6-205ENST00000423941 SLC44A4Q53GD3 710 aa19.35■□□□□ 0.69
HDAC6-205ENST00000423941 TADA2BQ86TJ2 420 aa19.35■□□□□ 0.69
HDAC6-205ENST00000423941 PASD1Q8IV76 773 aa19.35■□□□□ 0.69
HDAC6-205ENST00000423941 C1orf131Q8NDD1 294 aaKnown RBP19.35■□□□□ 0.69
HDAC6-205ENST00000423941 DDX23Q9BUQ8 820 aaKnown RBP19.35■□□□□ 0.69
HDAC6-205ENST00000423941 C1QTNF1Q9BXJ1 281 aa19.35■□□□□ 0.69
HDAC6-205ENST00000423941 RBSNQ9H1K0 784 aa19.35■□□□□ 0.69
HDAC6-205ENST00000423941 ST7Q9NRC1 585 aa19.35■□□□□ 0.69
HDAC6-205ENST00000423941 NUDT5Q9UKK9 219 aa19.35■□□□□ 0.69
HDAC6-205ENST00000423941 CAPN11Q9UMQ6 739 aa19.35■□□□□ 0.69
HDAC6-205ENST00000423941 CEP83Q9Y592 693 aa19.35■□□□□ 0.69
HDAC6-205ENST00000423941 LRRC53A6NM62 1247 aa19.34■□□□□ 0.69
HDAC6-205ENST00000423941 AP5Z1O43299 807 aa19.34■□□□□ 0.69
HDAC6-205ENST00000423941 LTFP02788 710 aa19.34■□□□□ 0.69
HDAC6-205ENST00000423941 CCDC172P0C7W6 258 aa19.34■□□□□ 0.69
HDAC6-205ENST00000423941 UNGP13051 313 aaPredicted RBP19.34■□□□□ 0.69
HDAC6-205ENST00000423941 TAF3Q5VWG9 929 aa19.34■□□□□ 0.69
HDAC6-205ENST00000423941 BTBD8Q5XKL5 378 aa19.34■□□□□ 0.69
HDAC6-205ENST00000423941 TRIM72Q6ZMU5 477 aa19.34■□□□□ 0.69
HDAC6-205ENST00000423941 HTR3DQ70Z44 454 aa19.34■□□□□ 0.69
HDAC6-205ENST00000423941 YAF2Q8IY57 180 aa19.34■□□□□ 0.69
HDAC6-205ENST00000423941 OSCP1Q8WVF1 389 aa19.34■□□□□ 0.69
HDAC6-205ENST00000423941 WBP2Q969T9 261 aa19.34■□□□□ 0.69
HDAC6-205ENST00000423941 ZFYVE19Q96K21 471 aa19.34■□□□□ 0.69
HDAC6-205ENST00000423941 NOX5Q96PH1 765 aa19.34■□□□□ 0.69
HDAC6-205ENST00000423941 PCDHB18PQ96TA0 734 aa19.34■□□□□ 0.69
HDAC6-205ENST00000423941 MIS12Q9H081 205 aa19.34■□□□□ 0.69
HDAC6-205ENST00000423941 HPS4Q9NQG7 708 aa19.34■□□□□ 0.69
HDAC6-205ENST00000423941 OLA1Q9NTK5 396 aaKnown RBP19.34■□□□□ 0.69
HDAC6-205ENST00000423941 SMPD4Q9NXE4 827 aa19.34■□□□□ 0.69
HDAC6-205ENST00000423941 CBFA2T2O43439 604 aa19.33■□□□□ 0.68
HDAC6-205ENST00000423941 ERBB2P04626 1255 aa19.33■□□□□ 0.68
HDAC6-205ENST00000423941 GLI1P08151 1106 aa19.33■□□□□ 0.68
HDAC6-205ENST00000423941 PRKCQQ04759 706 aa19.33■□□□□ 0.68
HDAC6-205ENST00000423941 PDGFRLQ15198 375 aa19.33■□□□□ 0.68
HDAC6-205ENST00000423941 EML3Q32P44 896 aa19.33■□□□□ 0.68
HDAC6-205ENST00000423941 C10orf120Q5SQS8 335 aa19.33■□□□□ 0.68
HDAC6-205ENST00000423941 E4F1Q66K89 784 aaPredicted RBP19.33■□□□□ 0.68
HDAC6-205ENST00000423941 ADGRG2Q8IZP9 1017 aa19.33■□□□□ 0.68
HDAC6-205ENST00000423941 SYN2Q92777 582 aaPredicted RBP19.33■□□□□ 0.68
HDAC6-205ENST00000423941 LINC00597Q9H2U6 94 aa19.33■□□□□ 0.68
HDAC6-205ENST00000423941 ARHGEF3Q9NR81 526 aa19.33■□□□□ 0.68
HDAC6-205ENST00000423941 ASNSD1Q9NWL6 643 aa19.33■□□□□ 0.68
HDAC6-205ENST00000423941 CFAP97Q9P2B7 532 aa19.33■□□□□ 0.68
HDAC6-205ENST00000423941 OTOL1A6NHN0 477 aaPredicted RBP19.32■□□□□ 0.68
HDAC6-205ENST00000423941 PRR33A8MZF0 331 aa19.32■□□□□ 0.68
HDAC6-205ENST00000423941 MDM4O15151 490 aa19.32■□□□□ 0.68
HDAC6-205ENST00000423941 STC2O76061 302 aa19.32■□□□□ 0.68
HDAC6-205ENST00000423941 GYPCP04921 128 aa19.32■□□□□ 0.68
HDAC6-205ENST00000423941 TPM3P06753 285 aa19.32■□□□□ 0.68
HDAC6-205ENST00000423941 SCNN1AP37088 669 aa19.32■□□□□ 0.68
HDAC6-205ENST00000423941 SNX16P57768 344 aa19.32■□□□□ 0.68
HDAC6-205ENST00000423941 COG7P83436 770 aa19.32■□□□□ 0.68
HDAC6-205ENST00000423941 TNK2Q07912 1038 aa19.32■□□□□ 0.68
HDAC6-205ENST00000423941 EIF4EBP2Q13542 120 aaPredicted RBP19.32■□□□□ 0.68
HDAC6-205ENST00000423941 RUNX3Q13761 415 aa19.32■□□□□ 0.68
HDAC6-205ENST00000423941 MLF2Q15773 248 aaPredicted RBP19.32■□□□□ 0.68
HDAC6-205ENST00000423941 CC2D1AQ6P1N0 951 aaPredicted RBP19.32■□□□□ 0.68
HDAC6-205ENST00000423941 OLFML1Q6UWY5 402 aa19.32■□□□□ 0.68
HDAC6-205ENST00000423941 Q6ZNB5 142 aa19.32■□□□□ 0.68
HDAC6-205ENST00000423941 ZDHHC17Q8IUH5 632 aa19.32■□□□□ 0.68
HDAC6-205ENST00000423941 SIX5Q8N196 739 aa19.32■□□□□ 0.68
HDAC6-205ENST00000423941 ZNF397Q8NF99 534 aaPredicted RBP19.32■□□□□ 0.68
HDAC6-205ENST00000423941 OTUB2Q96DC9 234 aa19.32■□□□□ 0.68
HDAC6-205ENST00000423941 PIWIL1Q96J94 861 aaKnown RBP19.32■□□□□ 0.68
HDAC6-205ENST00000423941 AGPAT1Q99943 283 aa19.32■□□□□ 0.68
HDAC6-205ENST00000423941 HEBP1Q9NRV9 189 aa19.32■□□□□ 0.68
HDAC6-205ENST00000423941 DUS2Q9NX74 493 aaKnown RBP19.32■□□□□ 0.68
HDAC6-205ENST00000423941 MARCH2Q9P0N8 246 aa19.32■□□□□ 0.68
HDAC6-205ENST00000423941 COL4A3Q01955 1670 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms