RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 FGFBP2Q9BYJ0 223 aa17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 DPEP3Q9H4B8 488 aa17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 CCSER2Q9H7U1 834 aa17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 DNAJC17Q9NVM6 304 aaKnown RBP17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 COMMD8Q9NX08 183 aa17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 CCDC39Q9UFE4 941 aa17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 PTPRBP23467 1997 aa17.75■□□□□ 0.43
CHCHD3-202ENST00000423635 CLDN5O00501 218 aa17.74■□□□□ 0.43
CHCHD3-202ENST00000423635 GREM1O60565 184 aa17.74■□□□□ 0.43
CHCHD3-202ENST00000423635 PRPF6O94906 941 aaKnown RBP17.74■□□□□ 0.43
CHCHD3-202ENST00000423635 GJB2P29033 226 aa17.74■□□□□ 0.43
CHCHD3-202ENST00000423635 CBWD2Q8IUF1 395 aa17.74■□□□□ 0.43
CHCHD3-202ENST00000423635 CADM4Q8NFZ8 388 aa17.74■□□□□ 0.43
CHCHD3-202ENST00000423635 SCAMP5Q8TAC9 235 aa17.74■□□□□ 0.43
CHCHD3-202ENST00000423635 BAHD1Q8TBE0 780 aaPredicted RBP17.74■□□□□ 0.43
CHCHD3-202ENST00000423635 LRIG1Q96JA1 1093 aa17.74■□□□□ 0.43
CHCHD3-202ENST00000423635 KCNK16Q96T55 309 aa17.74■□□□□ 0.43
CHCHD3-202ENST00000423635 TOR4AQ9NXH8 423 aa17.74■□□□□ 0.43
CHCHD3-202ENST00000423635 WSB2Q9NYS7 404 aaPredicted RBP17.74■□□□□ 0.43
CHCHD3-202ENST00000423635 MARK1Q9P0L2 795 aa17.74■□□□□ 0.43
CHCHD3-202ENST00000423635 WDR35Q9P2L0 1181 aa17.74■□□□□ 0.43
CHCHD3-202ENST00000423635 ASXL3Q9C0F0 2248 aa17.74■□□□□ 0.43
CHCHD3-202ENST00000423635 CISD3P0C7P0 127 aa17.73■□□□□ 0.43
CHCHD3-202ENST00000423635 RRAGBQ5VZM2 374 aa17.73■□□□□ 0.43
CHCHD3-202ENST00000423635 B3GALNT2Q8NCR0 500 aa17.73■□□□□ 0.43
CHCHD3-202ENST00000423635 GLIS3Q8NEA6 775 aa17.73■□□□□ 0.43
CHCHD3-202ENST00000423635 SETD7Q8WTS6 366 aaKnown RBP17.73■□□□□ 0.43
CHCHD3-202ENST00000423635 SCFD1Q8WVM8 642 aa17.73■□□□□ 0.43
CHCHD3-202ENST00000423635 SLC6A17Q9H1V8 727 aa17.73■□□□□ 0.43
CHCHD3-202ENST00000423635 KIAA1586Q9HCI6 787 aa17.73■□□□□ 0.43
CHCHD3-202ENST00000423635 ITM2CQ9NQX7 267 aa17.73■□□□□ 0.43
CHCHD3-202ENST00000423635 CACNA2D2Q9NY47 1150 aa17.73■□□□□ 0.43
CHCHD3-202ENST00000423635 RAD54BQ9Y620 910 aa17.73■□□□□ 0.43
CHCHD3-202ENST00000423635 A0A087WV48 116 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 EIF4E1BA6NMX2 242 aaKnown RBP17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 A8MXQ7 604 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 STAU1O95793 577 aaKnown RBP17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 TYRP14679 529 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 WDR72Q3MJ13 1102 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 IL27RAQ6UWB1 636 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 PAQR9Q6ZVX9 377 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 TOE1Q96GM8 510 aaKnown RBP17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 BBS2Q9BXC9 721 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 GAREM1Q9H706 876 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 IL21RQ9HBE5 538 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 TM7SF3Q9NS93 570 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 USP36Q9P275 1121 aaKnown RBP17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 PCDHGB2Q9Y5G2 931 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 HELZ2Q9BYK8 2649 aaKnown RBP17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 BPTFQ12830 3046 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 WASH3PC4AMC7 463 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 NEDD8-MDP1E9PL57 170 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 IDEP14735 1019 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 ZNF132P52740 706 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 SLC5A3P53794 718 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 CAMK2BQ13554 666 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 BRAPQ7Z569 592 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 SCUBE3Q8IX30 993 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 ERLEC1Q96DZ1 483 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 CDC6Q99741 560 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 KLF16Q9BXK1 252 aaPredicted RBP17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 PANK4Q9NVE7 773 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 GMIPQ9P107 970 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 FBXO10Q9UK96 956 aa17.72■□□□□ 0.43
CHCHD3-202ENST00000423635 FLNBO75369 2602 aaKnown RBP17.71■□□□□ 0.43
CHCHD3-202ENST00000423635 METTL12A8MUP2 240 aa17.71■□□□□ 0.42
CHCHD3-202ENST00000423635 CILPO75339 1184 aa17.71■□□□□ 0.42
CHCHD3-202ENST00000423635 CER1O95813 267 aa17.71■□□□□ 0.42
CHCHD3-202ENST00000423635 NCAM1P13591 858 aa17.71■□□□□ 0.42
CHCHD3-202ENST00000423635 MATKP42679 507 aa17.71■□□□□ 0.42
CHCHD3-202ENST00000423635 DGKGP49619 791 aa17.71■□□□□ 0.42
CHCHD3-202ENST00000423635 TNNC1P63316 161 aa17.71■□□□□ 0.42
CHCHD3-202ENST00000423635 BNC1Q01954 994 aa17.71■□□□□ 0.42
CHCHD3-202ENST00000423635 KIAA1324Q6UXG2 1013 aaKnown RBP17.71■□□□□ 0.42
CHCHD3-202ENST00000423635 GALNT15Q8N3T1 639 aa17.71■□□□□ 0.42
CHCHD3-202ENST00000423635 GPR174Q9BXC1 333 aa17.71■□□□□ 0.42
CHCHD3-202ENST00000423635 PRDM16Q9HAZ2 1276 aa17.71■□□□□ 0.42
CHCHD3-202ENST00000423635 HSPBP1Q9NZL4 362 aa17.71■□□□□ 0.42
CHCHD3-202ENST00000423635 TRABD2BA6NFA1 517 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 MEI4A8MW99 385 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 KCNJ18B7U540 433 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 NPC1O15118 1278 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 BCAT2O15382 392 aaPredicted RBP17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 FLRT2O43155 660 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 TLR5O60602 858 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 ATXN1LP0C7T5 689 aaKnown RBP17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 IRF1P10914 325 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 TNNI1P19237 187 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 OXTRP30559 389 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 PGFP49763 221 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 CYP4F3Q08477 520 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 ENPP2Q13822 863 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 HLA-BQ31612 363 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 FUT11Q495W5 492 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 LARP1BQ659C4 914 aaKnown RBP17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 TPGS1Q6ZTW0 290 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 FAM35AQ86V20 835 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 ZCCHC9Q8N567 271 aaKnown RBP17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 C1orf216Q8TAB5 229 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 ADAM32Q8TC27 787 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms