RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 SCD5Q86SK9 330 aa16■□□□□ 0.15
USB1-202ENST00000423271 KBTBD6Q86V97 674 aa16■□□□□ 0.15
USB1-202ENST00000423271 PHTF2Q8N3S3 785 aa16■□□□□ 0.15
USB1-202ENST00000423271 CCDC33Q8N5R6 958 aa16■□□□□ 0.15
USB1-202ENST00000423271 OTUB2Q96DC9 234 aa16■□□□□ 0.15
USB1-202ENST00000423271 FAXDC2Q96IV6 333 aa16■□□□□ 0.15
USB1-202ENST00000423271 PNKPQ96T60 521 aa16■□□□□ 0.15
USB1-202ENST00000423271 DUSP9Q99956 384 aaKnown RBP16■□□□□ 0.15
USB1-202ENST00000423271 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16■□□□□ 0.15
USB1-202ENST00000423271 DYNC1LI1Q9Y6G9 523 aaKnown RBP16■□□□□ 0.15
USB1-202ENST00000423271 NCOR2Q9Y618 2525 aa16■□□□□ 0.15
USB1-202ENST00000423271 MYO18AQ92614 2054 aaKnown RBP15.99■□□□□ 0.15
USB1-202ENST00000423271 MBD3O95983 291 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 HNRNPLP14866 589 aaKnown RBP eCLIP15.99■□□□□ 0.15
USB1-202ENST00000423271 ATP5C1P36542 298 aaKnown RBP15.99■□□□□ 0.15
USB1-202ENST00000423271 LMNB2Q03252 620 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 GAD2Q05329 585 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 LRMPQ12912 555 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 STIM1Q13586 685 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 CUL2Q13617 745 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 PUM1Q14671 1186 aaKnown RBP eCLIP15.99■□□□□ 0.15
USB1-202ENST00000423271 ARHGAP17Q68EM7 881 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 ERMP1Q7Z2K6 904 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 CCDC186Q7Z3E2 898 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 TTC30AQ86WT1 665 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 TMEM25Q86YD3 366 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 ETFBKMTQ8IXQ9 262 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 TTC39CQ8N584 583 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 NAT16Q8N8M0 369 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 DHTKD1Q96HY7 919 aaPredicted RBP15.99■□□□□ 0.15
USB1-202ENST00000423271 DNAI2Q9GZS0 605 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 ZDHHC4Q9NPG8 344 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 ARHGEF4Q9NR80 690 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 SPHK2Q9NRA0 654 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 SEMA4GQ9NTN9 838 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 NAGPAQ9UK23 515 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 USP3Q9Y6I4 520 aa15.99■□□□□ 0.15
USB1-202ENST00000423271 PPP1R3GB7ZBB8 358 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 DCLK1O15075 740 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 HOXC11O43248 304 aaPredicted RBP15.98■□□□□ 0.15
USB1-202ENST00000423271 APODP05090 189 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 TIE1P35590 1138 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 FMO5P49326 533 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 GOLGA7BQ2TAP0 167 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 ANO4Q32M45 955 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 C10orf120Q5SQS8 335 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 EMC10Q5UCC4 262 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 TTI2Q6NXR4 508 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 HTR3DQ70Z44 454 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 DGLUCYQ7Z3D6 616 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 CACNA2D4Q7Z3S7 1137 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 PIGZQ86VD9 579 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 ALLCQ8N6M5 410 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 UBR7Q8N806 425 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 TRIML1Q8N9V2 468 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 TSTD1Q8NFU3 115 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 CCDC26Q8TAB7 109 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 NELFBQ8WX92 580 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 TPSD1Q9BZJ3 242 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 EBF1Q9UH73 591 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 MMP17Q9ULZ9 603 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 CTNND2Q9UQB3 1225 aa15.98■□□□□ 0.15
USB1-202ENST00000423271 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.97■□□□□ 0.15
USB1-202ENST00000423271 TULP2O00295 520 aa15.97■□□□□ 0.15
USB1-202ENST00000423271 TRIM24O15164 1050 aa15.97■□□□□ 0.15
USB1-202ENST00000423271 LRP3O75074 770 aa15.97■□□□□ 0.15
USB1-202ENST00000423271 TULP3O75386 442 aa15.97■□□□□ 0.15
USB1-202ENST00000423271 KLF8O95600 359 aaPredicted RBP15.97■□□□□ 0.15
USB1-202ENST00000423271 ATXN8OSP0DMR3 200 aa15.97■□□□□ 0.15
USB1-202ENST00000423271 GRIA2P42262 883 aa15.97■□□□□ 0.15
USB1-202ENST00000423271 KIR2DL1P43626 348 aaPredicted RBP15.97■□□□□ 0.15
USB1-202ENST00000423271 DGKEP52429 567 aa15.97■□□□□ 0.15
USB1-202ENST00000423271 MRPS21P82921 87 aaKnown RBP15.97■□□□□ 0.15
USB1-202ENST00000423271 CCDC6Q16204 474 aa15.97■□□□□ 0.15
USB1-202ENST00000423271 CCDC40Q4G0X9 1142 aa15.97■□□□□ 0.15
USB1-202ENST00000423271 ANO7Q6IWH7 933 aa15.97■□□□□ 0.15
USB1-202ENST00000423271 KLHDC10Q6PID8 442 aa15.97■□□□□ 0.15
USB1-202ENST00000423271 TMEM92Q6UXU6 159 aa15.97■□□□□ 0.15
USB1-202ENST00000423271 PRR23CQ6ZRP0 262 aa15.97■□□□□ 0.15
USB1-202ENST00000423271 IL17RCQ8NAC3 791 aa15.97■□□□□ 0.15
USB1-202ENST00000423271 TXNDC5Q8NBS9 432 aaKnown RBP15.97■□□□□ 0.15
USB1-202ENST00000423271 CEP63Q96MT8 703 aa15.97■□□□□ 0.15
USB1-202ENST00000423271 FAM124BQ9H5Z6 455 aaPredicted RBP15.97■□□□□ 0.15
USB1-202ENST00000423271 METTL14Q9HCE5 456 aaKnown RBP15.97■□□□□ 0.15
USB1-202ENST00000423271 DNMT3LQ9UJW3 386 aa15.97■□□□□ 0.15
USB1-202ENST00000423271 A0A0A0MRY4 1105 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 PRR5-ARHGAP8B1AHC4 643 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 SGK1O00141 431 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 EPN2O95208 641 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 PPP1R2P41236 205 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 PSEN1P49768 467 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 ATXN1P54253 815 aaKnown RBP15.96■□□□□ 0.15
USB1-202ENST00000423271 STX17P56962 302 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 ARHGAP8P85298 464 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 FOXK2Q01167 660 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 PDE4CQ08493 712 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 GOLGA8FQ08AF8 430 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 GOLGA8DPQ0D2H9 430 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 CRY1Q16526 586 aa15.96■□□□□ 0.15
USB1-202ENST00000423271 CSRP2Q16527 193 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms