RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 ZMIZ2Q8NF64 920 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 ZNF396Q96N95 335 aaPredicted RBP17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 SMOQ99835 787 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 SDCBP2Q9H190 292 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 FBXO44Q9H4M3 255 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 CAPN10Q9HC96 672 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 CSNK1G1Q9HCP0 422 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 SLC39A2Q9NP94 309 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 KRT82Q9NSB4 513 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 NEUROG3Q9Y4Z2 214 aa17.84■□□□□ 0.45
UPF3AP3-201ENST00000420996 PCDH15Q96QU1 1955 aa17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 TRIM24O15164 1050 aa17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 HYAL3O43820 417 aaPredicted RBP17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 CACNG3O60359 315 aa17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 ZNF217O75362 1048 aa17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 C4BPAP04003 597 aaKnown RBP17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 CASP1P29466 404 aa17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 WASP42768 502 aa17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 PGFP49763 221 aa17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 SDE2Q6IQ49 451 aa17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 SCARA5Q6ZMJ2 495 aa17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 CRYBG2Q8N1P7 616 aa17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 DEFB119Q8N690 84 aa17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 GOLGA5Q8TBA6 731 aa17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 XPO6Q96QU8 1125 aaKnown RBP17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 GTPBP2Q9BX10 602 aaKnown RBP17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 KLF16Q9BXK1 252 aaPredicted RBP17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 TLR8Q9NR97 1041 aaKnown RBP17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 DNAJC17Q9NVM6 304 aaKnown RBP17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 WDR35Q9P2L0 1181 aa17.83■□□□□ 0.44
UPF3AP3-201ENST00000420996 FAM208BQ5VWN6 2430 aa17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 IGHV1OR15-9A0A0B4J2B8 117 aa17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 SPAARA0A1B0GVQ0 90 aa17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 LRRIQ3A6PVS8 624 aaPredicted RBP17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 POLR2DO15514 142 aaKnown RBP17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 GREM1O60565 184 aa17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 BEST1O76090 585 aa17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 CLSTN1O94985 981 aa17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 VNN1O95497 513 aa17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 P4HA1P13674 534 aa17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 SIM1P81133 766 aaPredicted RBP17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 SGSM1Q2NKQ1 1148 aa17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 EGFLAMQ63HQ2 1017 aa17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 KIAA1211LQ6NV74 962 aa17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 IPO4Q8TEX9 1081 aaKnown RBP17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 BLZF1Q9H2G9 400 aa17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 CD248Q9HCU0 757 aa17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 FSCN3Q9NQT6 498 aa17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 FOXD4L1Q9NU39 408 aa17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 MSRB2Q9Y3D2 182 aa17.82■□□□□ 0.44
UPF3AP3-201ENST00000420996 A0A1W2PQD8 194 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 SRRM3A6NNA2 597 aaPredicted RBP17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 NEDD8-MDP1E9PL57 170 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 H0Y626 953 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 ARHGAP33O14559 1287 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 OPHN1O60890 802 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 TRIM16O95361 564 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 TBX18O95935 607 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 CCDC130P13994 396 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 TYRP14679 529 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 NDUFV2P19404 249 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 RDXP35241 583 aaKnown RBP17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 ATP5C1P36542 298 aaKnown RBP17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 MAP3K7CLP57077 242 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 GOLGA8FQ08AF8 430 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 GOLGA8DPQ0D2H9 430 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 UNC93AQ86WB7 457 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 SLC41A1Q8IVJ1 513 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 CHPFQ8IZ52 775 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 SLC2A14Q8TDB8 520 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 ELMO3Q96BJ8 720 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 ACOX2Q99424 681 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 GABRG3Q99928 467 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 BBS2Q9BXC9 721 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 CYLDQ9NQC7 956 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 DMAC2Q9NW81 257 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 MARK1Q9P0L2 795 aa17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 LSM7Q9UK45 103 aaKnown RBP17.81■□□□□ 0.44
UPF3AP3-201ENST00000420996 PRRT4C9JH25 899 aa17.8■□□□□ 0.44
UPF3AP3-201ENST00000420996 RPN1P04843 607 aaKnown RBP17.8■□□□□ 0.44
UPF3AP3-201ENST00000420996 SYPP08247 313 aa17.8■□□□□ 0.44
UPF3AP3-201ENST00000420996 NDST1P52848 882 aa17.8■□□□□ 0.44
UPF3AP3-201ENST00000420996 CUL4BQ13620 913 aa17.8■□□□□ 0.44
UPF3AP3-201ENST00000420996 TPGS1Q6ZTW0 290 aa17.8■□□□□ 0.44
UPF3AP3-201ENST00000420996 SLC9A9Q8IVB4 645 aa17.8■□□□□ 0.44
UPF3AP3-201ENST00000420996 MINDY1Q8N5J2 469 aa17.8■□□□□ 0.44
UPF3AP3-201ENST00000420996 TMEM174Q8WUU8 243 aa17.8■□□□□ 0.44
UPF3AP3-201ENST00000420996 ZCCHC14Q8WYQ9 949 aaKnown RBP17.8■□□□□ 0.44
UPF3AP3-201ENST00000420996 TAF4BQ92750 862 aa17.8■□□□□ 0.44
UPF3AP3-201ENST00000420996 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.8■□□□□ 0.44
UPF3AP3-201ENST00000420996 HMGXB4Q9UGU5 601 aa17.8■□□□□ 0.44
UPF3AP3-201ENST00000420996 CYP8B1Q9UNU6 501 aa17.8■□□□□ 0.44
UPF3AP3-201ENST00000420996 SCML2Q9UQR0 700 aa17.8■□□□□ 0.44
UPF3AP3-201ENST00000420996 GFRA2O00451 464 aa17.79■□□□□ 0.44
UPF3AP3-201ENST00000420996 FAM200BP0CF97 657 aa17.79■□□□□ 0.44
UPF3AP3-201ENST00000420996 CD59P13987 128 aa17.79■□□□□ 0.44
UPF3AP3-201ENST00000420996 AFMP43652 599 aa17.79■□□□□ 0.44
UPF3AP3-201ENST00000420996 ORC1Q13415 861 aa17.79■□□□□ 0.44
UPF3AP3-201ENST00000420996 HNRNPDQ14103 355 aaKnown RBP17.79■□□□□ 0.44
UPF3AP3-201ENST00000420996 ZACNQ401N2 412 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms