RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 SENP8Q96LD8 212 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 PGLYRP2Q96PD5 576 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 PPP1R10Q96QC0 940 aaKnown RBP9.17□□□□□ -0.94
SNCA-206ENST00000420646 CRTAC1Q9NQ79 661 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 RAB6BQ9NRW1 208 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 RNF186Q9NXI6 227 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 DDX43Q9NXZ2 648 aaKnown RBP9.17□□□□□ -0.94
SNCA-206ENST00000420646 PCDH10Q9P2E7 1040 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 XPO7Q9UIA9 1087 aaKnown RBP9.17□□□□□ -0.94
SNCA-206ENST00000420646 CHMP2BQ9UQN3 213 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 FARP1Q9Y4F1 1045 aaPredicted RBP9.17□□□□□ -0.94
SNCA-206ENST00000420646 CLUHO75153 1309 aa9.17□□□□□ -0.94
SNCA-206ENST00000420646 GOLGA8RI6L899 631 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 IGHA2P01877 340 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 ITGB1P05556 798 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 PTPN1P18031 435 aaKnown RBP9.16□□□□□ -0.94
SNCA-206ENST00000420646 GRIA1P42261 906 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 BRCC3P46736 316 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 BCAT1P54687 386 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 ROR1Q01973 937 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 CAV1Q03135 178 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 IFRD2Q12894 506 aaPredicted RBP9.16□□□□□ -0.94
SNCA-206ENST00000420646 ZKSCAN8Q15776 578 aaPredicted RBP9.16□□□□□ -0.94
SNCA-206ENST00000420646 RNF187Q5TA31 235 aaPredicted RBP9.16□□□□□ -0.94
SNCA-206ENST00000420646 C3orf62Q6ZUJ4 267 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 UNC93AQ86WB7 457 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 NAT8LQ8N9F0 302 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 FBXO36Q8NEA4 188 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 FAXDC2Q96IV6 333 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 KATNAL1Q9BW62 490 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 USP29Q9HBJ7 922 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 XPNPEP3Q9NQH7 507 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 MTMR10Q9NXD2 777 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 GDAP2Q9NXN4 497 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 PADI3Q9ULW8 664 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 MYO18AQ92614 2054 aaKnown RBP9.16□□□□□ -0.94
SNCA-206ENST00000420646 RASA4BC9J798 803 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 RASA4O43374 803 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 ENDOD1O94919 500 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 APRTP07741 180 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 GNAT1P11488 350 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 CYP2F1P24903 491 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 L1CAMP32004 1257 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 MORF4L2Q15014 288 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 XKR4Q5GH76 650 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 APBB1IPQ7Z5R6 666 aaPredicted RBP9.16□□□□□ -0.94
SNCA-206ENST00000420646 DNAJC5GQ8N7S2 189 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 DYDC1Q8WWB3 177 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 SOCS4Q8WXH5 440 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 EDEM1Q92611 657 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 KCTD15Q96SI1 283 aaPredicted RBP9.16□□□□□ -0.94
SNCA-206ENST00000420646 TMEM209Q96SK2 561 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 LGMNQ99538 433 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 MTG1Q9BT17 334 aaPredicted RBP9.16□□□□□ -0.94
SNCA-206ENST00000420646 TMEM109Q9BVC6 243 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 FAM129AQ9BZQ8 928 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 ANLNQ9NQW6 1124 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 KRT82Q9NSB4 513 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 M0QZ92 97 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 CREB3O43889 395 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 B3GAT3O94766 335 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 USP17L7P0C7H9 530 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 HSPA1AP0DMV8 641 aaKnown RBP9.16□□□□□ -0.94
SNCA-206ENST00000420646 HSPA1BP0DMV9 641 aaKnown RBP9.16□□□□□ -0.94
SNCA-206ENST00000420646 PRKAR2AP13861 404 aaKnown RBP9.16□□□□□ -0.94
SNCA-206ENST00000420646 AXLP30530 894 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 HOXC8P31273 242 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 NOMO1Q15155 1222 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 SV2CQ496J9 727 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 MFSD5Q6N075 450 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 CLEC20AQ6ZU45 233 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 TNS4Q8IZW8 715 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.16□□□□□ -0.94
SNCA-206ENST00000420646 BBOF1Q8ND07 529 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 PYROXD1Q8WU10 500 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 SPOCK2Q92563 424 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 PCED1BQ96HM7 432 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 ZNF560Q96MR9 790 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 SERPINB12Q96P63 405 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 ZNF317Q96PQ6 595 aaPredicted RBP9.16□□□□□ -0.94
SNCA-206ENST00000420646 ELAC2Q9BQ52 826 aaKnown RBP9.16□□□□□ -0.94
SNCA-206ENST00000420646 C5orf42Q9H799 3197 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 UBN1Q9NPG3 1134 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 AP4E1Q9UPM8 1137 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 SNX10Q9Y5X0 201 aa9.16□□□□□ -0.94
SNCA-206ENST00000420646 TTC3P53804 2025 aa9.15□□□□□ -0.94
SNCA-206ENST00000420646 YJEFN3A6XGL0 299 aa9.15□□□□□ -0.94
SNCA-206ENST00000420646 E7ENQ6 273 aa9.15□□□□□ -0.94
SNCA-206ENST00000420646 I6L893 689 aaPredicted RBP9.15□□□□□ -0.94
SNCA-206ENST00000420646 ALOX15BO15296 676 aa9.15□□□□□ -0.94
SNCA-206ENST00000420646 THP07101 528 aa9.15□□□□□ -0.94
SNCA-206ENST00000420646 KRT15P19012 456 aa9.15□□□□□ -0.94
SNCA-206ENST00000420646 DRD4P21917 467 aa9.15□□□□□ -0.94
SNCA-206ENST00000420646 ELK3P41970 407 aa9.15□□□□□ -0.94
SNCA-206ENST00000420646 TIGD5Q53EQ6 642 aa9.15□□□□□ -0.94
SNCA-206ENST00000420646 BOLA3Q53S33 107 aa9.15□□□□□ -0.94
SNCA-206ENST00000420646 ARHGAP17Q68EM7 881 aa9.15□□□□□ -0.94
SNCA-206ENST00000420646 TAF2Q6P1X5 1199 aa9.15□□□□□ -0.94
SNCA-206ENST00000420646 CENPUQ71F23 418 aa9.15□□□□□ -0.94
SNCA-206ENST00000420646 PPIL6Q8IXY8 311 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms