RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 SPOPLQ6IQ16 392 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 SHC4Q6S5L8 630 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 PNPLA1Q8N8W4 532 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 C12orf29Q8N999 325 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 TRIML1Q8N9V2 468 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 FOXD4L4Q8WXT5 416 aaPredicted RBP13.64□□□□□ -0.23
LINC00339-203ENST00000420503 TWNKQ96RR1 684 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 TNMDQ9H2S6 317 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 NMUR1Q9HB89 426 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 SLC39A2Q9NP94 309 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 DNAJC17Q9NVM6 304 aaKnown RBP13.64□□□□□ -0.23
LINC00339-203ENST00000420503 PLK2Q9NYY3 685 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 IL37Q9NZH6 218 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 TBC1D14Q9P2M4 693 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 DEC1Q9P2X7 70 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 SLC6A14Q9UN76 642 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 NEUROG3Q9Y4Z2 214 aa13.64□□□□□ -0.23
LINC00339-203ENST00000420503 LRRIQ3A6PVS8 624 aaPredicted RBP13.63□□□□□ -0.23
LINC00339-203ENST00000420503 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.63□□□□□ -0.23
LINC00339-203ENST00000420503 EIF3DO15371 548 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC00339-203ENST00000420503 CYP26A1O43174 497 aa13.63□□□□□ -0.23
LINC00339-203ENST00000420503 SH3BP5O60239 455 aa13.63□□□□□ -0.23
LINC00339-203ENST00000420503 AP1G2O75843 785 aa13.63□□□□□ -0.23
LINC00339-203ENST00000420503 CLSTN1O94985 981 aa13.63□□□□□ -0.23
LINC00339-203ENST00000420503 CAPNS1P04632 268 aa13.63□□□□□ -0.23
LINC00339-203ENST00000420503 NASPP49321 788 aaPredicted RBP13.63□□□□□ -0.23
LINC00339-203ENST00000420503 MAP3K7CLP57077 242 aa13.63□□□□□ -0.23
LINC00339-203ENST00000420503 TRPC3Q13507 836 aa13.63□□□□□ -0.23
LINC00339-203ENST00000420503 DUOXA1Q1HG43 343 aa13.63□□□□□ -0.23
LINC00339-203ENST00000420503 ZNF699Q32M78 642 aa13.63□□□□□ -0.23
LINC00339-203ENST00000420503 HSF5Q4G112 596 aaPredicted RBP13.63□□□□□ -0.23
LINC00339-203ENST00000420503 GRAMD4Q6IC98 578 aa13.63□□□□□ -0.23
LINC00339-203ENST00000420503 C19orf48Q6RUI8 117 aa13.63□□□□□ -0.23
LINC00339-203ENST00000420503 DDX42Q86XP3 938 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC00339-203ENST00000420503 MARCH9Q86YJ5 346 aa13.63□□□□□ -0.23
LINC00339-203ENST00000420503 XXYLT1Q8NBI6 393 aa13.63□□□□□ -0.23
LINC00339-203ENST00000420503 LINC00301Q8NCQ3 95 aa13.63□□□□□ -0.23
LINC00339-203ENST00000420503 SLC2A14Q8TDB8 520 aa13.63□□□□□ -0.23
LINC00339-203ENST00000420503 IPO4Q8TEX9 1081 aaKnown RBP13.63□□□□□ -0.23
LINC00339-203ENST00000420503 KLF16Q9BXK1 252 aaPredicted RBP13.63□□□□□ -0.23
LINC00339-203ENST00000420503 SLC32A1Q9H598 525 aa13.63□□□□□ -0.23
LINC00339-203ENST00000420503 DMAP1Q9NPF5 467 aaPredicted RBP13.63□□□□□ -0.23
LINC00339-203ENST00000420503 LHX6Q9UPM6 363 aa13.63□□□□□ -0.23
LINC00339-203ENST00000420503 MSRB2Q9Y3D2 182 aa13.63□□□□□ -0.23
LINC00339-203ENST00000420503 SLCO1B1Q9Y6L6 691 aa13.63□□□□□ -0.23
LINC00339-203ENST00000420503 GOLGA4Q13439 2230 aaKnown RBP13.62□□□□□ -0.23
LINC00339-203ENST00000420503 CABIN1Q9Y6J0 2220 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 FAM92AA1XBS5 289 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 AP5Z1O43299 807 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 TLR5O60602 858 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 GJB3O75712 270 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 RTN3O95197 1032 aaPredicted RBP13.62□□□□□ -0.23
LINC00339-203ENST00000420503 STAU1O95793 577 aaKnown RBP13.62□□□□□ -0.23
LINC00339-203ENST00000420503 SERPINF2P08697 491 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 TYRP14679 529 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 ADORA2BP29275 332 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 NTSR1P30989 418 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 ATXN3P54252 364 aaPredicted RBP13.62□□□□□ -0.23
LINC00339-203ENST00000420503 GFPT1Q06210 699 aaPredicted RBP13.62□□□□□ -0.23
LINC00339-203ENST00000420503 BIRC3Q13489 604 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 STK38Q15208 465 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 FOXD4L6Q3SYB3 417 aaPredicted RBP13.62□□□□□ -0.23
LINC00339-203ENST00000420503 SNX30Q5VWJ9 437 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 BTBD8Q5XKL5 378 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 FOXD4L3Q6VB84 417 aaPredicted RBP13.62□□□□□ -0.23
LINC00339-203ENST00000420503 CACUL1Q86Y37 369 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 CHPFQ8IZ52 775 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 KIAA1958Q8N8K9 716 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 PDZD8Q8NEN9 1154 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 MRGPRX1Q96LB2 322 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 BBS2Q9BXC9 721 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 IL21RQ9HBE5 538 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 KIAA1586Q9HCI6 787 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 EHD2Q9NZN4 543 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 ADAMTS20P59510 1910 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 NBEAQ8NFP9 2946 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 LOC400499M0QZD8 3231 aa13.62□□□□□ -0.23
LINC00339-203ENST00000420503 LAMA5O15230 3695 aa13.61□□□□□ -0.23
LINC00339-203ENST00000420503 TMEM8BA6NDV4 472 aa13.61□□□□□ -0.23
LINC00339-203ENST00000420503 HHLA1C9JL84 531 aa13.61□□□□□ -0.23
LINC00339-203ENST00000420503 ARHGAP33O14559 1287 aa13.61□□□□□ -0.23
LINC00339-203ENST00000420503 CACNG3O60359 315 aa13.61□□□□□ -0.23
LINC00339-203ENST00000420503 OPHN1O60890 802 aa13.61□□□□□ -0.23
LINC00339-203ENST00000420503 PHACTR2O75167 634 aa13.61□□□□□ -0.23
LINC00339-203ENST00000420503 C4BPAP04003 597 aaKnown RBP13.61□□□□□ -0.23
LINC00339-203ENST00000420503 CISD3P0C7P0 127 aa13.61□□□□□ -0.23
LINC00339-203ENST00000420503 TUBP50607 506 aa13.61□□□□□ -0.23
LINC00339-203ENST00000420503 NDST1P52848 882 aa13.61□□□□□ -0.23
LINC00339-203ENST00000420503 CUL4BQ13620 913 aa13.61□□□□□ -0.23
LINC00339-203ENST00000420503 NCOA4Q13772 614 aa13.61□□□□□ -0.23
LINC00339-203ENST00000420503 LRSAM1Q6UWE0 723 aa13.61□□□□□ -0.23
LINC00339-203ENST00000420503 KIAA1324Q6UXG2 1013 aaKnown RBP13.61□□□□□ -0.23
LINC00339-203ENST00000420503 STXBP4Q6ZWJ1 553 aa13.61□□□□□ -0.23
LINC00339-203ENST00000420503 RAB44Q7Z6P3 723 aaPredicted RBP13.61□□□□□ -0.23
LINC00339-203ENST00000420503 HDDC3Q8N4P3 179 aa13.61□□□□□ -0.23
LINC00339-203ENST00000420503 OVCA2Q8WZ82 227 aa13.61□□□□□ -0.23
LINC00339-203ENST00000420503 SYAP1Q96A49 352 aaPredicted RBP13.61□□□□□ -0.23
LINC00339-203ENST00000420503 OTUB2Q96DC9 234 aa13.61□□□□□ -0.23
LINC00339-203ENST00000420503 SMARCD1Q96GM5 515 aa13.61□□□□□ -0.23
LINC00339-203ENST00000420503 GABRG3Q99928 467 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms