RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 BHLHA9Q7RTU4 235 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 TADA2BQ86TJ2 420 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 ARHGAP18Q8N392 663 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 KCTD13Q8WZ19 329 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 NELL1Q92832 810 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 CD101Q93033 1021 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 FAM81BQ96LP2 452 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 CDK5RAP1Q96SZ6 601 aaKnown RBP21.35■■□□□ 1.01
GTF3A-202ENST00000419181 TUBGCP2Q9BSJ2 902 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 ULBP1Q9BZM6 244 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 LRRC4Q9HBW1 653 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 SAMSN1Q9NSI8 373 aaKnown RBP21.35■■□□□ 1.01
GTF3A-202ENST00000419181 APEX2Q9UBZ4 518 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 DNMT3LQ9UJW3 386 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 R4GN57 208 aa21.35■■□□□ 1.01
GTF3A-202ENST00000419181 KIAA1549LQ6ZVL6 1849 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 M0QYV0 167 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 MDM4O15151 490 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 EGFP01133 1207 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 IRF1P10914 325 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 RALAP11233 206 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 PON1P27169 355 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 OPRD1P41143 372 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 MFAP3P55082 362 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 SATB1Q01826 763 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 APBA1Q02410 837 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 ADIGQ0VDE8 80 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 RHBDF2Q6PJF5 856 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 ZC3H14Q6PJT7 736 aaKnown RBP21.34■■□□□ 1.01
GTF3A-202ENST00000419181 TSSK4Q6SA08 328 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 HTR3DQ70Z44 454 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 ASCL5Q7RTU5 278 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 BBS7Q8IWZ6 715 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 SLC35F5Q8WV83 523 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 NDST4Q9H3R1 872 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 NFE2L3Q9Y4A8 694 aa21.34■■□□□ 1.01
GTF3A-202ENST00000419181 RIF1Q5UIP0 2472 aaKnown RBP21.34■■□□□ 1.01
GTF3A-202ENST00000419181 ATG2BQ96BY7 2078 aa21.33■■□□□ 1.01
GTF3A-202ENST00000419181 PRR23AA6NEV1 266 aa21.33■■□□□ 1.01
GTF3A-202ENST00000419181 KCNJ18B7U540 433 aa21.33■■□□□ 1.01
GTF3A-202ENST00000419181 PAPSS2O95340 614 aaPredicted RBP21.33■■□□□ 1.01
GTF3A-202ENST00000419181 ADH1CP00326 375 aa21.33■■□□□ 1.01
GTF3A-202ENST00000419181 KRT5P13647 590 aa21.33■■□□□ 1.01
GTF3A-202ENST00000419181 PRKCSHP14314 528 aaPredicted RBP21.33■■□□□ 1.01
GTF3A-202ENST00000419181 CXCL12P48061 93 aa21.33■■□□□ 1.01
GTF3A-202ENST00000419181 YWHAGP61981 247 aaKnown RBP eCLIP21.33■■□□□ 1.01
GTF3A-202ENST00000419181 GOLGA8FQ08AF8 430 aa21.33■■□□□ 1.01
GTF3A-202ENST00000419181 GOLGA8DPQ0D2H9 430 aa21.33■■□□□ 1.01
GTF3A-202ENST00000419181 KCNJ12Q14500 433 aa21.33■■□□□ 1.01
GTF3A-202ENST00000419181 PPP2R5DQ14738 602 aa21.33■■□□□ 1.01
GTF3A-202ENST00000419181 VWA3BQ502W6 1294 aa21.33■■□□□ 1.01
GTF3A-202ENST00000419181 PMF1Q6P1K2 205 aa21.33■■□□□ 1.01
GTF3A-202ENST00000419181 SCML4Q8N228 414 aa21.33■■□□□ 1.01
GTF3A-202ENST00000419181 ENOX1Q8TC92 643 aaKnown RBP21.33■■□□□ 1.01
GTF3A-202ENST00000419181 EZH1Q92800 747 aaPredicted RBP21.33■■□□□ 1.01
GTF3A-202ENST00000419181 SECISBP2LQ93073 1101 aaKnown RBP21.33■■□□□ 1.01
GTF3A-202ENST00000419181 SIX2Q9NPC8 291 aa21.33■■□□□ 1.01
GTF3A-202ENST00000419181 GABBR2O75899 941 aa21.32■■□□□ 1
GTF3A-202ENST00000419181 ADH5P11766 374 aa21.32■■□□□ 1
GTF3A-202ENST00000419181 EEF1GP26641 437 aaKnown RBP21.32■■□□□ 1
GTF3A-202ENST00000419181 FBXO43Q4G163 708 aa21.32■■□□□ 1
GTF3A-202ENST00000419181 LY6G5CQ5SRR4 150 aa21.32■■□□□ 1
GTF3A-202ENST00000419181 PKN3Q6P5Z2 889 aa21.32■■□□□ 1
GTF3A-202ENST00000419181 SIX6OS1Q8N1H7 587 aa21.32■■□□□ 1
GTF3A-202ENST00000419181 ZBTB44Q8NCP5 570 aa21.32■■□□□ 1
GTF3A-202ENST00000419181 NDRG1Q92597 394 aaKnown RBP21.32■■□□□ 1
GTF3A-202ENST00000419181 FAM126AQ9BYI3 521 aaPredicted RBP21.32■■□□□ 1
GTF3A-202ENST00000419181 SEMA4AQ9H3S1 761 aa21.32■■□□□ 1
GTF3A-202ENST00000419181 CNGB3Q9NQW8 809 aa21.32■■□□□ 1
GTF3A-202ENST00000419181 C2orf42Q9NWW7 574 aa21.32■■□□□ 1
GTF3A-202ENST00000419181 ZSCAN32Q9NX65 697 aa21.32■■□□□ 1
GTF3A-202ENST00000419181 PCDHGA2Q9Y5H1 932 aa21.32■■□□□ 1
GTF3A-202ENST00000419181 BECN2A8MW95 431 aa21.31■■□□□ 1
GTF3A-202ENST00000419181 RNF40O75150 1001 aa21.31■■□□□ 1
GTF3A-202ENST00000419181 EIF2DP41214 584 aaKnown RBP21.31■■□□□ 1
GTF3A-202ENST00000419181 RGS7P49802 495 aa21.31■■□□□ 1
GTF3A-202ENST00000419181 MEA1Q16626 185 aa21.31■■□□□ 1
GTF3A-202ENST00000419181 TCP11X2Q5H9J9 407 aa21.31■■□□□ 1
GTF3A-202ENST00000419181 CCDC183Q5T5S1 534 aa21.31■■□□□ 1
GTF3A-202ENST00000419181 SMYD5Q6GMV2 418 aa21.31■■□□□ 1
GTF3A-202ENST00000419181 SASS6Q6UVJ0 657 aa21.31■■□□□ 1
GTF3A-202ENST00000419181 MIB1Q86YT6 1006 aa21.31■■□□□ 1
GTF3A-202ENST00000419181 SHC3Q92529 594 aa21.31■■□□□ 1
GTF3A-202ENST00000419181 LSM7Q9UK45 103 aaKnown RBP21.31■■□□□ 1
GTF3A-202ENST00000419181 FAM186AA6NE01 2351 aa21.3■■□□□ 1
GTF3A-202ENST00000419181 YJEFN3A6XGL0 299 aa21.3■■□□□ 1
GTF3A-202ENST00000419181 CHURC1-FNTBB4DL54 471 aa21.3■■□□□ 1
GTF3A-202ENST00000419181 E7ENQ6 273 aa21.3■■□□□ 1
GTF3A-202ENST00000419181 K7ESF4 209 aa21.3■■□□□ 1
GTF3A-202ENST00000419181 STC2O76061 302 aa21.3■■□□□ 1
GTF3A-202ENST00000419181 LCP1P13796 627 aa21.3■■□□□ 1
GTF3A-202ENST00000419181 DAOAP59103 153 aa21.3■■□□□ 1
GTF3A-202ENST00000419181 EFEMP1Q12805 493 aa21.3■■□□□ 1
GTF3A-202ENST00000419181 ARHGAP44Q17R89 818 aa21.3■■□□□ 1
GTF3A-202ENST00000419181 CDKAL1Q5VV42 579 aa21.3■■□□□ 1
GTF3A-202ENST00000419181 DPY19L2P1Q6NXN4 242 aa21.3■■□□□ 1
GTF3A-202ENST00000419181 Q6ZNB5 142 aa21.3■■□□□ 1
GTF3A-202ENST00000419181 C11orf57Q6ZUT1 292 aaPredicted RBP21.3■■□□□ 1
GTF3A-202ENST00000419181 RSRC2Q7L4I2 434 aaKnown RBP21.3■■□□□ 1
GTF3A-202ENST00000419181 C12orf40Q86WS4 652 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms