RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 BCL7CQ8WUZ0 217 aaPredicted RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 TEKT4Q8WW24 435 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 RIN2Q8WYP3 895 aaPredicted RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 BADQ92934 168 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 ZNF689Q96CS4 500 aaPredicted RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 MS4A14Q96JA4 679 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 C8orf48Q96LL4 319 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 SLITRK1Q96PX8 696 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 TMEM209Q96SK2 561 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 SEPT5Q99719 369 aaPredicted RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 RHOBTB2Q9BYZ6 727 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 GPR62Q9BZJ7 368 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 UBXN6Q9BZV1 441 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 FBXO44Q9H4M3 255 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 SLITRK6Q9H5Y7 841 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 CWH43Q9H720 699 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 ZWILCHQ9H900 591 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 POPDC2Q9HBU9 364 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 RBM12Q9NTZ6 932 aaKnown RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 SMARCAL1Q9NZC9 954 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 TMEM59LQ9UK28 342 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 SSX2IPQ9Y2D8 614 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 PCDHB3Q9Y5E6 796 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 BACE2Q9Y5Z0 518 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 CDY1Q9Y6F8 540 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 SLC4A7Q9Y6M7 1214 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 NYNRINQ9P2P1 1898 aaKnown RBP6.22□□□□□ -1.41
HMGB3-202ENST00000419110 NRG2O14511 850 aaPredicted RBP6.22□□□□□ -1.41
HMGB3-202ENST00000419110 MDM4O15151 490 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 TLL1O43897 1013 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 LPXNO60711 386 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 TJP3O95049 919 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 ZRANB2O95218 330 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMGB3-202ENST00000419110 GAS8O95995 478 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 RHOXF2BP0C7M4 288 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 ATP2A2P16615 1042 aaKnown RBP6.22□□□□□ -1.41
HMGB3-202ENST00000419110 MIPP30301 263 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 CHRNA3P32297 505 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 CTNNB1P35222 781 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 NOS2P35228 1153 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 FNTAP49354 379 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 NDUFV1P49821 464 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 CACNA2D1P54289 1103 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 AIF1P55008 147 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 CDH6P55285 790 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 YWHAZP63104 245 aaKnown RBP6.22□□□□□ -1.41
HMGB3-202ENST00000419110 ROR1Q01973 937 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 DSG1Q02413 1049 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 KRT17Q04695 432 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 GPR17Q13304 367 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 DHX34Q14147 1143 aaKnown RBP6.22□□□□□ -1.41
HMGB3-202ENST00000419110 TFDP2Q14188 446 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 VEPH1Q14D04 833 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 ERCC6LQ2NKX8 1250 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 C15orf59Q2T9L4 293 aaPredicted RBP6.22□□□□□ -1.41
HMGB3-202ENST00000419110 SLC25A52Q3SY17 297 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 MGAT5BQ3V5L5 792 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 GLE1Q53GS7 698 aaKnown RBP6.22□□□□□ -1.41
HMGB3-202ENST00000419110 TFDP3Q5H9I0 405 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 EFHC2Q5JST6 749 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 DAB2IPQ5VWQ8 1189 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 TPGS2Q68CL5 300 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 SLC8B1Q6J4K2 584 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 PRSS55Q6UWB4 352 aaPredicted RBP6.22□□□□□ -1.41
HMGB3-202ENST00000419110 SPOCD1Q6ZMY3 1216 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 ZNF365Q70YC5 407 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 VSIG1Q86XK7 387 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 HERC6Q8IVU3 1022 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 MAP7D3Q8IWC1 876 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 SCUBE3Q8IX30 993 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 KLHL7Q8IXQ5 586 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 GPR65Q8IYL9 337 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 RNF168Q8IYW5 571 aaPredicted RBP6.22□□□□□ -1.41
HMGB3-202ENST00000419110 RCOR2Q8IZ40 523 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 DEFB106AQ8N104 65 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 MMGT1Q8N4V1 131 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 C12orf50Q8NA57 414 aaPredicted RBP6.22□□□□□ -1.41
HMGB3-202ENST00000419110 ZMIZ2Q8NF64 920 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 CCDC26Q8TAB7 109 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 CLEC4CQ8WTT0 213 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 HERVK_113Q902F9 699 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 HSPH1Q92598 858 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 FBXO32Q969P5 355 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 VWCEQ96DN2 955 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 B3GALT6Q96L58 329 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 CCDC114Q96M63 670 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 CEP295NLQ96MC4 621 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 CFAP57Q96MR6 1250 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 SERPINB11Q96P15 392 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 PGLYRP2Q96PD5 576 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 SLC2A13Q96QE2 648 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 KRT12Q99456 494 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 RHOXF2Q9BQY4 288 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 ZNF670Q9BS34 389 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 SNRNP25Q9BV90 132 aaKnown RBP6.22□□□□□ -1.41
HMGB3-202ENST00000419110 CALN1Q9BXU9 219 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 OSBPL8Q9BZF1 889 aa6.22□□□□□ -1.41
HMGB3-202ENST00000419110 RAB17Q9H0T7 212 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms