RNA–Protein interactions for RNA: ENST00000419020.1

DDX39B-205, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-205ENST00000419020 SPATA17Q96L03 361 aa12.37□□□□□ -0.43
DDX39B-205ENST00000419020 TRIM9Q9C026 710 aa12.37□□□□□ -0.43
DDX39B-205ENST00000419020 DDX43Q9NXZ2 648 aaKnown RBP12.37□□□□□ -0.43
DDX39B-205ENST00000419020 SEPT3Q9UH03 358 aa12.37□□□□□ -0.43
DDX39B-205ENST00000419020 CLEC18AA5D8T8 446 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 DTNBO60941 627 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 ITGAVP06756 1048 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 XBP1P17861 261 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 ITGB6P18564 788 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 MUTP22033 750 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 GABREP78334 506 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 TLE1Q04724 770 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 ORC1Q13415 861 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 KYAT1Q16773 422 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 LINC00303Q3SY05 128 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 HIST2H2BCQ6DN03 193 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 CLEC18BQ6UXF7 455 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 DENND5BQ6ZUT9 1274 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 ADAT2Q7Z6V5 191 aaKnown RBP12.36□□□□□ -0.43
DDX39B-205ENST00000419020 CACUL1Q86Y37 369 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 CD302Q8IX05 232 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 LSMEM2Q8N112 164 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 KRI1Q8N9T8 703 aaKnown RBP12.36□□□□□ -0.43
DDX39B-205ENST00000419020 CLEC18CQ8NCF0 446 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 PRCCQ92733 491 aaPredicted RBP12.36□□□□□ -0.43
DDX39B-205ENST00000419020 FUBP3Q96I24 572 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDX39B-205ENST00000419020 ELF4Q99607 663 aaPredicted RBP12.36□□□□□ -0.43
DDX39B-205ENST00000419020 RUSC1Q9BVN2 902 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 TTLL2Q9BWV7 592 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 C17orf75Q9HAS0 396 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 LRWD1Q9UFC0 647 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 ADAMTS1Q9UHI8 967 aa12.36□□□□□ -0.43
DDX39B-205ENST00000419020 SPTBN1Q01082 2364 aaKnown RBP12.36□□□□□ -0.43
DDX39B-205ENST00000419020 TP53BP1Q12888 1972 aaPredicted RBP12.36□□□□□ -0.43
DDX39B-205ENST00000419020 NEDD8-MDP1E9PL57 170 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 OGTO15294 1046 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 HCRTO43612 131 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 CACNG3O60359 315 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 MT-CO3P00414 261 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 ABCB4P21439 1286 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 ACSL1P33121 698 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 KRT2P35908 639 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 MAGEA11P43364 429 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 PPP3CCP48454 512 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 COPAP53621 1224 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 MYL7Q01449 175 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 STK3Q13188 491 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 TOB2Q14106 344 aaPredicted RBP12.35□□□□□ -0.43
DDX39B-205ENST00000419020 SV2CQ496J9 727 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 CPLX2Q6PUV4 134 aaKnown RBP12.35□□□□□ -0.43
DDX39B-205ENST00000419020 KCNB2Q92953 911 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 WBP2Q969T9 261 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 BIRC7Q96CA5 298 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 BICD1Q96G01 975 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 VCPIP1Q96JH7 1222 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 ORAI3Q9BRQ5 295 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 LARP6Q9BRS8 491 aaKnown RBP12.35□□□□□ -0.43
DDX39B-205ENST00000419020 ASCL3Q9NQ33 180 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 DPP3Q9NY33 737 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 CPSF3Q9UKF6 684 aaKnown RBP12.35□□□□□ -0.43
DDX39B-205ENST00000419020 L1RE1Q9UN81 338 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 KIAA1024Q9UPX6 916 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 DERAQ9Y315 318 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 NBASA2RRP1 2371 aa12.35□□□□□ -0.43
DDX39B-205ENST00000419020 ITPR3Q14573 2671 aa12.34□□□□□ -0.43
DDX39B-205ENST00000419020 ACADMP11310 421 aa12.34□□□□□ -0.43
DDX39B-205ENST00000419020 TYRP14679 529 aa12.34□□□□□ -0.43
DDX39B-205ENST00000419020 CKMT2P17540 419 aa12.34□□□□□ -0.43
DDX39B-205ENST00000419020 CD27P26842 260 aa12.34□□□□□ -0.43
DDX39B-205ENST00000419020 CDC25AP30304 524 aa12.34□□□□□ -0.43
DDX39B-205ENST00000419020 MCM7P33993 719 aa12.34□□□□□ -0.43
DDX39B-205ENST00000419020 CCT6AP40227 531 aaKnown RBP12.34□□□□□ -0.43
DDX39B-205ENST00000419020 RIPPLY3P57055 190 aa12.34□□□□□ -0.43
DDX39B-205ENST00000419020 C21orf59P57076 290 aa12.34□□□□□ -0.43
DDX39B-205ENST00000419020 HAUS3Q68CZ6 603 aa12.34□□□□□ -0.43
DDX39B-205ENST00000419020 CCDC81Q6ZN84 652 aa12.34□□□□□ -0.43
DDX39B-205ENST00000419020 OSTM1Q86WC4 334 aa12.34□□□□□ -0.43
DDX39B-205ENST00000419020 XPO6Q96QU8 1125 aaKnown RBP12.34□□□□□ -0.43
DDX39B-205ENST00000419020 BBS2Q9BXC9 721 aa12.34□□□□□ -0.43
DDX39B-205ENST00000419020 DDX19AQ9NUU7 478 aaKnown RBP12.34□□□□□ -0.43
DDX39B-205ENST00000419020 SH3BP1Q9Y3L3 701 aa12.34□□□□□ -0.43
DDX39B-205ENST00000419020 C2CD2Q9Y426 696 aa12.34□□□□□ -0.43
DDX39B-205ENST00000419020 SNX14Q9Y5W7 946 aa12.34□□□□□ -0.43
DDX39B-205ENST00000419020 ARID1BQ8NFD5 2236 aaPredicted RBP12.34□□□□□ -0.43
DDX39B-205ENST00000419020 E9PMD0 336 aa12.33□□□□□ -0.44
DDX39B-205ENST00000419020 VILLO15195 856 aa12.33□□□□□ -0.44
DDX39B-205ENST00000419020 COCHO43405 550 aa12.33□□□□□ -0.44
DDX39B-205ENST00000419020 SYNCRIPO60506 623 aaKnown RBP12.33□□□□□ -0.44
DDX39B-205ENST00000419020 TSPAN3O60637 253 aa12.33□□□□□ -0.44
DDX39B-205ENST00000419020 ATP2C2O75185 946 aa12.33□□□□□ -0.44
DDX39B-205ENST00000419020 CISD3P0C7P0 127 aa12.33□□□□□ -0.44
DDX39B-205ENST00000419020 LSSP48449 732 aa12.33□□□□□ -0.44
DDX39B-205ENST00000419020 ZNF132P52740 706 aa12.33□□□□□ -0.44
DDX39B-205ENST00000419020 TAF10Q12962 218 aa12.33□□□□□ -0.44
DDX39B-205ENST00000419020 ENPP2Q13822 863 aa12.33□□□□□ -0.44
DDX39B-205ENST00000419020 ARL13BQ3SXY8 428 aa12.33□□□□□ -0.44
DDX39B-205ENST00000419020 RINT1Q6NUQ1 792 aa12.33□□□□□ -0.44
DDX39B-205ENST00000419020 FAM171BQ6P995 826 aa12.33□□□□□ -0.44
DDX39B-205ENST00000419020 VSTM1Q6UX27 236 aa12.33□□□□□ -0.44
DDX39B-205ENST00000419020 C1orf186Q6ZWK4 172 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms