RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 SNRNP25Q9BV90 132 aaKnown RBP12.36□□□□□ -0.43
LIMK1-202ENST00000418310 ACSS2Q9NR19 701 aa12.36□□□□□ -0.43
LIMK1-202ENST00000418310 PHIPQ8WWQ0 1821 aa12.36□□□□□ -0.43
LIMK1-202ENST00000418310 I3L4J1 428 aa12.36□□□□□ -0.43
LIMK1-202ENST00000418310 CAPN9O14815 690 aa12.36□□□□□ -0.43
LIMK1-202ENST00000418310 LYPLA1O75608 230 aaPredicted RBP12.36□□□□□ -0.43
LIMK1-202ENST00000418310 METTL18O95568 372 aa12.36□□□□□ -0.43
LIMK1-202ENST00000418310 INSRRP14616 1297 aa12.36□□□□□ -0.43
LIMK1-202ENST00000418310 OSBPP22059 807 aa12.36□□□□□ -0.43
LIMK1-202ENST00000418310 CDH5P33151 784 aaPredicted RBP12.36□□□□□ -0.43
LIMK1-202ENST00000418310 ABCG1P45844 678 aa12.36□□□□□ -0.43
LIMK1-202ENST00000418310 GTF2A2P52657 109 aa12.36□□□□□ -0.43
LIMK1-202ENST00000418310 MBTD1Q05BQ5 628 aa12.36□□□□□ -0.43
LIMK1-202ENST00000418310 OLIG2Q13516 323 aa12.36□□□□□ -0.43
LIMK1-202ENST00000418310 THOC5Q13769 683 aaKnown RBP12.36□□□□□ -0.43
LIMK1-202ENST00000418310 RASA2Q15283 850 aa12.36□□□□□ -0.43
LIMK1-202ENST00000418310 CCDC142Q17RM4 750 aa12.36□□□□□ -0.43
LIMK1-202ENST00000418310 CTC1Q2NKJ3 1217 aa12.36□□□□□ -0.43
LIMK1-202ENST00000418310 CAPRIN2Q6IMN6 1127 aaKnown RBP12.36□□□□□ -0.43
LIMK1-202ENST00000418310 CMASQ8NFW8 434 aaPredicted RBP12.36□□□□□ -0.43
LIMK1-202ENST00000418310 CYLDQ9NQC7 956 aa12.36□□□□□ -0.43
LIMK1-202ENST00000418310 TMPRSS4Q9NRS4 437 aa12.36□□□□□ -0.43
LIMK1-202ENST00000418310 WASF2Q9Y6W5 498 aa12.36□□□□□ -0.43
LIMK1-202ENST00000418310 B2RBV5 119 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 APOL1O14791 398 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 TUBP50607 506 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 TMEM132DQ14C87 1099 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 PARP6Q2NL67 630 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 CES4AQ5XG92 561 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 DENND5BQ6ZUT9 1274 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 PYROXD2Q8N2H3 581 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 HIPK4Q8NE63 616 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 PCDH19Q8TAB3 1148 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 INPP5DQ92835 1189 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 NSL1Q96IY1 281 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 C12orf42Q96LP6 360 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 RNF157Q96PX1 679 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 KCNK13Q9HB14 408 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 TAS2R1Q9NYW7 299 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 TEX264Q9Y6I9 313 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 CCDC78A2IDD5 438 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 TM9SF1O15321 606 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 NPTXRO95502 500 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 BAG2O95816 211 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 ZNF143P52747 638 aaPredicted RBP12.35□□□□□ -0.43
LIMK1-202ENST00000418310 AQP5P55064 265 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 CDK16Q00536 496 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 SLC10A6Q3KNW5 377 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 C4orf50Q6ZRC1 276 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 TSHZ1Q6ZSZ6 1077 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 NUDCD3Q8IVD9 361 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 HACE1Q8IYU2 909 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 EFCAB3Q8N7B9 438 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 POU5F2Q8N7G0 328 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 OR6B3Q8NGW1 331 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 UCMAQ8WVF2 138 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 STMN2Q93045 179 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 OXNAD1Q96HP4 312 aaPredicted RBP12.35□□□□□ -0.43
LIMK1-202ENST00000418310 MRPL45Q9BRJ2 306 aaKnown RBP12.35□□□□□ -0.43
LIMK1-202ENST00000418310 CNPY3Q9BT09 278 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 FAM49AQ9H0Q0 323 aaPredicted RBP12.35□□□□□ -0.43
LIMK1-202ENST00000418310 ZNF112Q9UJU3 913 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 TTLL3Q9Y4R7 772 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 GSC2O15499 205 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 B4GALT4O60513 344 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 CCDC22O60826 627 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 ARF4P18085 180 aaPredicted RBP12.35□□□□□ -0.43
LIMK1-202ENST00000418310 AMPD1P23109 780 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 ADORA2AP29274 412 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 SDC4P31431 198 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 RABGGTBP53611 331 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 RPL10AP62906 217 aaKnown RBP12.35□□□□□ -0.43
LIMK1-202ENST00000418310 UBAP2LQ14157 1087 aaKnown RBP12.35□□□□□ -0.43
LIMK1-202ENST00000418310 KCNJ11Q14654 390 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 SURF1Q15526 300 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 LRRC36Q1X8D7 754 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 CCDC14Q49A88 953 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 RGS9BPQ6ZS82 235 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 RSPH3Q86UC2 560 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 SLC26A11Q86WA9 606 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 TREML1Q86YW5 311 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 DEPDC1BQ8WUY9 529 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 EBF4Q9BQW3 602 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 BTBD10Q9BSF8 475 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 C20orf27Q9GZN8 174 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 VPS11Q9H270 941 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 ETNK2Q9NVF9 386 aa12.35□□□□□ -0.43
LIMK1-202ENST00000418310 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.34□□□□□ -0.43
LIMK1-202ENST00000418310 C2CD4BA6NLJ0 364 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 E7ESA3 106 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 USP2O75604 605 aaPredicted RBP12.34□□□□□ -0.43
LIMK1-202ENST00000418310 GNAZP19086 355 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 PTPN7P35236 360 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 PGM1P36871 562 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 ENPEPQ07075 957 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 PPP2R5DQ14738 602 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 CDCA2Q69YH5 1023 aaPredicted RBP12.34□□□□□ -0.43
LIMK1-202ENST00000418310 NAIF1Q69YI7 327 aaPredicted RBP12.34□□□□□ -0.43
LIMK1-202ENST00000418310 UNC5AQ6ZN44 842 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 CYP4V2Q6ZWL3 525 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms