RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 CRISPLD1Q9H336 500 aa21.7■■□□□ 1.06
CASC3-203ENST00000418132 ZMYND8Q9ULU4 1186 aaPredicted RBP21.7■■□□□ 1.06
CASC3-203ENST00000418132 NAALADL1Q9UQQ1 740 aa21.7■■□□□ 1.06
CASC3-203ENST00000418132 PCDHB12Q9Y5F1 795 aa21.7■■□□□ 1.06
CASC3-203ENST00000418132 SLC4A7Q9Y6M7 1214 aa21.7■■□□□ 1.06
CASC3-203ENST00000418132 TARSL2A2RTX5 802 aaKnown RBP21.69■■□□□ 1.06
CASC3-203ENST00000418132 HAPLN1P10915 354 aaPredicted RBP21.69■■□□□ 1.06
CASC3-203ENST00000418132 KDELR1P24390 212 aa21.69■■□□□ 1.06
CASC3-203ENST00000418132 OR1D2P34982 312 aa21.69■■□□□ 1.06
CASC3-203ENST00000418132 CDKN2BP42772 138 aa21.69■■□□□ 1.06
CASC3-203ENST00000418132 SULT1E1P49888 294 aa21.69■■□□□ 1.06
CASC3-203ENST00000418132 LLGL1Q15334 1064 aa21.69■■□□□ 1.06
CASC3-203ENST00000418132 TAZQ16635 292 aa21.69■■□□□ 1.06
CASC3-203ENST00000418132 NUP93Q8N1F7 819 aa21.69■■□□□ 1.06
CASC3-203ENST00000418132 SP7Q8TDD2 431 aaPredicted RBP21.69■■□□□ 1.06
CASC3-203ENST00000418132 CLSTN3Q9BQT9 956 aa21.69■■□□□ 1.06
CASC3-203ENST00000418132 DDX47Q9H0S4 455 aaKnown RBP21.69■■□□□ 1.06
CASC3-203ENST00000418132 SLITRK6Q9H5Y7 841 aa21.69■■□□□ 1.06
CASC3-203ENST00000418132 RAB21Q9UL25 225 aa21.69■■□□□ 1.06
CASC3-203ENST00000418132 CAPN9O14815 690 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 RPL17P18621 184 aaKnown RBP21.68■■□□□ 1.06
CASC3-203ENST00000418132 GPR15P49685 360 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 PITX1P78337 314 aaPredicted RBP21.68■■□□□ 1.06
CASC3-203ENST00000418132 CYP1B1Q16678 543 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 TFDP3Q5H9I0 405 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 BSPRYQ5W0U4 402 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 SCYL2Q6P3W7 929 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 RAD9AQ99638 391 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 TRIM62Q9BVG3 475 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 RRN3Q9NYV6 651 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 IL37Q9NZH6 218 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 CALCOCO1Q9P1Z2 691 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 STK39Q9UEW8 545 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 hCG_1818297A0A087WSY0 165 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 CCDC151A5D8V7 595 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 C2CD2LO14523 706 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 MDM4O15151 490 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 BRD3Q15059 726 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 GPR65Q8IYL9 337 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 SPATA17Q96L03 361 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 HEMGNQ9BXL5 484 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 ARFGAP3Q9NP61 516 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 EFR3BQ9Y2G0 817 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 SLC27A5Q9Y2P5 690 aa21.68■■□□□ 1.06
CASC3-203ENST00000418132 PHF2O75151 1096 aa21.67■■□□□ 1.06
CASC3-203ENST00000418132 NCAM1P13591 858 aa21.67■■□□□ 1.06
CASC3-203ENST00000418132 ARSEP51690 589 aa21.67■■□□□ 1.06
CASC3-203ENST00000418132 ATXN1P54253 815 aaKnown RBP21.67■■□□□ 1.06
CASC3-203ENST00000418132 DUSP4Q13115 394 aa21.67■■□□□ 1.06
CASC3-203ENST00000418132 SDHAF4Q5VUM1 108 aa21.67■■□□□ 1.06
CASC3-203ENST00000418132 VPS52Q8N1B4 723 aa21.67■■□□□ 1.06
CASC3-203ENST00000418132 C12orf50Q8NA57 414 aaPredicted RBP21.67■■□□□ 1.06
CASC3-203ENST00000418132 KCTD6Q8NC69 237 aa21.67■■□□□ 1.06
CASC3-203ENST00000418132 HSPH1Q92598 858 aa21.67■■□□□ 1.06
CASC3-203ENST00000418132 PGAP3Q96FM1 320 aaPredicted RBP21.67■■□□□ 1.06
CASC3-203ENST00000418132 LBHD1Q9BQE6 289 aaPredicted RBP21.67■■□□□ 1.06
CASC3-203ENST00000418132 FBXO44Q9H4M3 255 aa21.67■■□□□ 1.06
CASC3-203ENST00000418132 PLXNA3P51805 1871 aa21.67■■□□□ 1.06
CASC3-203ENST00000418132 FGF18O76093 207 aa21.67■■□□□ 1.06
CASC3-203ENST00000418132 URODP06132 367 aa21.67■■□□□ 1.06
CASC3-203ENST00000418132 TUBBP07437 444 aa21.67■■□□□ 1.06
CASC3-203ENST00000418132 ATP2A2P16615 1042 aaKnown RBP21.67■■□□□ 1.06
CASC3-203ENST00000418132 MGAT5BQ3V5L5 792 aa21.67■■□□□ 1.06
CASC3-203ENST00000418132 HDAC7Q8WUI4 952 aa21.67■■□□□ 1.06
CASC3-203ENST00000418132 SNRNP25Q9BV90 132 aaKnown RBP21.67■■□□□ 1.06
CASC3-203ENST00000418132 MTIF3Q9H2K0 278 aaKnown RBP21.67■■□□□ 1.06
CASC3-203ENST00000418132 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.67■■□□□ 1.06
CASC3-203ENST00000418132 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.67■■□□□ 1.06
CASC3-203ENST00000418132 AFF4Q9UHB7 1163 aaKnown RBP21.67■■□□□ 1.06
CASC3-203ENST00000418132 DMGDHQ9UI17 866 aaKnown RBP21.67■■□□□ 1.06
CASC3-203ENST00000418132 SCML2Q9UQR0 700 aa21.67■■□□□ 1.06
CASC3-203ENST00000418132 FAM92AA1XBS5 289 aa21.66■■□□□ 1.06
CASC3-203ENST00000418132 M0QYT0 321 aa21.66■■□□□ 1.06
CASC3-203ENST00000418132 ABLIM3O94929 683 aa21.66■■□□□ 1.06
CASC3-203ENST00000418132 KRT10P13645 584 aa21.66■■□□□ 1.06
CASC3-203ENST00000418132 CHRNA3P32297 505 aa21.66■■□□□ 1.06
CASC3-203ENST00000418132 RDXP35241 583 aaKnown RBP21.66■■□□□ 1.06
CASC3-203ENST00000418132 YWHAGP61981 247 aaKnown RBP eCLIP21.66■■□□□ 1.06
CASC3-203ENST00000418132 RPL10AP62906 217 aaKnown RBP21.66■■□□□ 1.06
CASC3-203ENST00000418132 KRT17Q04695 432 aa21.66■■□□□ 1.06
CASC3-203ENST00000418132 ERMARDQ5T6L9 678 aa21.66■■□□□ 1.06
CASC3-203ENST00000418132 RASIP1Q5U651 963 aa21.66■■□□□ 1.06
CASC3-203ENST00000418132 WDR93Q6P2C0 686 aa21.66■■□□□ 1.06
CASC3-203ENST00000418132 ZNF461Q8TAF7 563 aa21.66■■□□□ 1.06
CASC3-203ENST00000418132 SEPT5Q99719 369 aaPredicted RBP21.66■■□□□ 1.06
CASC3-203ENST00000418132 LRRC19Q9H756 370 aa21.66■■□□□ 1.06
CASC3-203ENST00000418132 HSFX1Q9UBD0 423 aa21.66■■□□□ 1.06
CASC3-203ENST00000418132 MYO16Q9Y6X6 1858 aa21.66■■□□□ 1.06
CASC3-203ENST00000418132 RAD51CO43502 376 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 SOAT2O75908 522 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 TJP3O95049 919 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 CD48P09326 243 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 MRPS25P82663 173 aaKnown RBP21.65■■□□□ 1.06
CASC3-203ENST00000418132 ADCY2Q08462 1091 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 IFRD2Q12894 506 aaPredicted RBP21.65■■□□□ 1.06
CASC3-203ENST00000418132 PDK2Q15119 407 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 TPGS2Q68CL5 300 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 DENND5BQ6ZUT9 1274 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 SCD5Q86SK9 330 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 SLC7A14Q8TBB6 771 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms