RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 STK25O00506 426 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 INPP4BO15327 924 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 MYBL2P10244 700 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 ITGB6P18564 788 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 CHRNA5P30532 468 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 CCT8P50990 548 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 MRPS22P82650 360 aaKnown RBP12.4□□□□□ -0.42
UBR4-205ENST00000417040 ST3GAL1Q11201 340 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 TRMT5Q32P41 509 aaKnown RBP12.4□□□□□ -0.42
UBR4-205ENST00000417040 CREG2Q8IUH2 290 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 ATP6V1HQ9UI12 483 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 USP20Q9Y2K6 914 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 NPHP4O75161 1426 aaPredicted RBP12.4□□□□□ -0.42
UBR4-205ENST00000417040 KRT87PA6NCN2 255 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 ERI2A8K979 691 aaKnown RBP12.4□□□□□ -0.42
UBR4-205ENST00000417040 HS6ST1O60243 411 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 TCF3P15923 654 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 PSMC6P62333 389 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 FAAP100Q0VG06 881 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 KLHL17Q6TDP4 642 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 PODNQ7Z5L7 613 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 ARL10Q8N8L6 244 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.4□□□□□ -0.426e-6■■■□□ 14.8
UBR4-205ENST00000417040 KRT84Q9NSB2 600 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 PIPSLA2A3N6 862 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 SMAPO00193 183 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 KIAA0391O15091 583 aaKnown RBP12.4□□□□□ -0.42
UBR4-205ENST00000417040 NR3C2P08235 984 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 STIP1P31948 543 aaKnown RBP12.4□□□□□ -0.42
UBR4-205ENST00000417040 NCALDP61601 193 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 KYAT1Q16773 422 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 ADGRL3Q9HAR2 1447 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 MROH7Q68CQ1 1323 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 A8MUI8 341 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 TNPO2O14787 897 aaKnown RBP12.4□□□□□ -0.42
UBR4-205ENST00000417040 DCXO43602 365 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 UPP2O95045 317 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 IL18RAPO95256 599 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 ARP10275 920 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 PCNAP12004 261 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 TBX2Q13207 712 aaPredicted RBP12.4□□□□□ -0.42
UBR4-205ENST00000417040 C10orf120Q5SQS8 335 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 TYW3Q6IPR3 259 aaKnown RBP12.4□□□□□ -0.42
UBR4-205ENST00000417040 TRPC4APQ8TEL6 797 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 CINPQ9BW66 212 aaPredicted RBP12.4□□□□□ -0.42
UBR4-205ENST00000417040 DDIT4Q9NX09 232 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 STK39Q9UEW8 545 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 LRCH1Q9Y2L9 728 aa12.4□□□□□ -0.42
UBR4-205ENST00000417040 KBTBD13C9JR72 458 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 UBDO15205 165 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 GSTM1P09488 218 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 FEN1P39748 380 aaKnown RBP12.39□□□□□ -0.43
UBR4-205ENST00000417040 CSNK2BP67870 215 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 COX10Q12887 443 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 STILQ15468 1287 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 ILDR1Q86SU0 546 aaPredicted RBP12.39□□□□□ -0.43
UBR4-205ENST00000417040 NT5DC3Q86UY8 548 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 ATXN2LQ8WWM7 1075 aaKnown RBP12.39□□□□□ -0.43
UBR4-205ENST00000417040 RIBC2Q9H4K1 309 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 UBAP1Q9NZ09 502 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 P4HA2O15460 535 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 APOA4P06727 396 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 ARMC4Q5T2S8 1044 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 TERB1Q8NA31 727 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 TAS1R2Q8TE23 839 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 MTFMTQ96DP5 389 aaKnown RBP12.39□□□□□ -0.43
UBR4-205ENST00000417040 TRIM8Q9BZR9 551 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 TCF7L2Q9NQB0 619 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 MAP3K20Q9NYL2 800 aaKnown RBP12.39□□□□□ -0.43
UBR4-205ENST00000417040 FAM237BA0A1B0GVD1 139 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 PDE2AO00408 941 aaPredicted RBP12.39□□□□□ -0.43
UBR4-205ENST00000417040 ADRA1DP25100 572 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 PTDSS1P48651 473 aaKnown RBP12.39□□□□□ -0.43
UBR4-205ENST00000417040 RGS4P49798 205 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 SLC25A3Q00325 362 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 SNX32Q86XE0 403 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 B3GALNT2Q8NCR0 500 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 ZFP42Q96MM3 310 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 ACOX2Q99424 681 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 TLR10Q9BXR5 811 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 PIDD1Q9HB75 910 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 A0A1B0GW55 424 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 TNFAIP8O95379 198 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 DUX4L2P0CJ85 424 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 DUX4L3P0CJ86 424 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 DUX4L4P0CJ87 422 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 DUX4L5P0CJ88 424 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 DUX4L6P0CJ89 424 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 DUX4L7P0CJ90 424 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 MGAT1P26572 445 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 TP53BP2Q13625 1128 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 ARHGEF7Q14155 803 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 DDI2Q5TDH0 399 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 LINC00523Q86TU6 105 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 FAM228AQ86W67 206 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 DHFR2Q86XF0 187 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 C10orf53Q8N6V4 93 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 TRIM62Q9BVG3 475 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 CCDC167Q9P0B6 97 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 DUX4Q9UBX2 424 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms