RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 PSMD6Q15008 389 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 WDR45BQ5MNZ6 344 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 EGFLAMQ63HQ2 1017 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 RAB44Q7Z6P3 723 aaPredicted RBP10.62□□□□□ -0.71
MDC1-202ENST00000416571 FAM35AQ86V20 835 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 SLC41A1Q8IVJ1 513 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 SCAMP5Q8TAC9 235 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 IPO4Q8TEX9 1081 aaKnown RBP10.62□□□□□ -0.71
MDC1-202ENST00000416571 FOXJ1Q92949 421 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 SMARCD1Q96GM5 515 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 ZFRQ96KR1 1074 aaKnown RBP10.62□□□□□ -0.71
MDC1-202ENST00000416571 KCNK16Q96T55 309 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 BBS2Q9BXC9 721 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 TNMDQ9H2S6 317 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.62□□□□□ -0.716e-21■■■■■ 139.7
MDC1-202ENST00000416571 TMEM30AQ9NV96 361 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 COMMD8Q9NX08 183 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 GMIPQ9P107 970 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 WDR35Q9P2L0 1181 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 LSM7Q9UK45 103 aaKnown RBP10.62□□□□□ -0.71
MDC1-202ENST00000416571 STARD13Q9Y3M8 1113 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 NME7Q9Y5B8 376 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 MYH10P35580 1976 aa10.62□□□□□ -0.71
MDC1-202ENST00000416571 A0A1W2PQF6 199 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 MEI4A8MW99 385 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 TRIM24O15164 1050 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 CLIC2O15247 247 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 SH3BP5O60239 455 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 TLR5O60602 858 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 AP1G2O75843 785 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 STAU1O95793 577 aaKnown RBP10.61□□□□□ -0.71
MDC1-202ENST00000416571 FTH1P19P0C7X4 201 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 TYRP14679 529 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 TRIM21P19474 475 aaKnown RBP10.61□□□□□ -0.71
MDC1-202ENST00000416571 MYL6P60660 151 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 ASIC1P78348 528 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 AMPD3Q01432 767 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 CYP24A1Q07973 514 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 SCAPQ12770 1279 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 BIRC3Q13489 604 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 ZNF699Q32M78 642 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 ZNF667Q5HYK9 610 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 SNX30Q5VWJ9 437 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 KIAA1324Q6UXG2 1013 aaKnown RBP10.61□□□□□ -0.71
MDC1-202ENST00000416571 TPGS1Q6ZTW0 290 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 MIB1Q86YT6 1006 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 NAXDQ8IW45 347 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 XXYLT1Q8NBI6 393 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 GLIS3Q8NEA6 775 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 HPS3Q969F9 1004 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 CAMK1GQ96NX5 476 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 ACOX2Q99424 681 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 DUSP9Q99956 384 aaKnown RBP10.61□□□□□ -0.71
MDC1-202ENST00000416571 FBXO44Q9H4M3 255 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 TLR8Q9NR97 1041 aaKnown RBP10.61□□□□□ -0.71
MDC1-202ENST00000416571 AGPAT3Q9NRZ7 376 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 KRT82Q9NSB4 513 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 APOBEC2Q9Y235 224 aaKnown RBP10.61□□□□□ -0.71
MDC1-202ENST00000416571 WDFY3Q8IZQ1 3526 aa10.61□□□□□ -0.71
MDC1-202ENST00000416571 ADAMTS20P59510 1910 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 LOC400499M0QZD8 3231 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 A0A087X0B3 334 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 TAF4O00268 1085 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 CACNG3O60359 315 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 ATP5C1P36542 298 aaKnown RBP10.6□□□□□ -0.71
MDC1-202ENST00000416571 DGKGP49619 791 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 CDH8P55286 799 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 SNRPFP62306 86 aaKnown RBP10.6□□□□□ -0.71
MDC1-202ENST00000416571 STARD3Q14849 445 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 FAM26FQ5R3K3 315 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 FAM173BQ6P4H8 233 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 C19orf48Q6RUI8 117 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 SCARA5Q6ZMJ2 495 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 HTR3DQ70Z44 454 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 NELFCDQ8IXH7 590 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 PNPLA1Q8N8W4 532 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 SETD7Q8WTS6 366 aaKnown RBP10.6□□□□□ -0.71
MDC1-202ENST00000416571 ADAMTS14Q8WXS8 1223 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 ZNF419Q96HQ0 510 aaPredicted RBP10.6□□□□□ -0.71
MDC1-202ENST00000416571 MRGPRX1Q96LB2 322 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 GABRG3Q99928 467 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 TRIM9Q9C026 710 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 ZDHHC5Q9C0B5 715 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 CCDC86Q9H6F5 360 aaKnown RBP10.6□□□□□ -0.71
MDC1-202ENST00000416571 SMYD3Q9H7B4 428 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 CACNA2D2Q9NY47 1150 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 RAD54BQ9Y620 910 aa10.6□□□□□ -0.71
MDC1-202ENST00000416571 DSPP15924 2871 aaKnown RBP10.59□□□□□ -0.71
MDC1-202ENST00000416571 UBE4BO95155 1302 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 USP9XQ93008 2570 aaPredicted RBP10.59□□□□□ -0.71
MDC1-202ENST00000416571 A0A1B0GTW7 788 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 FAM92AA1XBS5 289 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 PRRT4C9JH25 899 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 GFRA2O00451 464 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 TGFB1I1O43294 461 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 EXOC3O60645 756 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 ZDHHC11BP0C7U3 371 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 P4HA1P13674 534 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 MAOBP27338 520 aa10.59□□□□□ -0.71
MDC1-202ENST00000416571 CD6P30203 668 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms