RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 ZCWPW2Q504Y3 356 aa21.59■■□□□ 1.05
PTPRU-203ENST00000415600 PKN3Q6P5Z2 889 aa21.59■■□□□ 1.05
PTPRU-203ENST00000415600 CCDC186Q7Z3E2 898 aa21.59■■□□□ 1.05
PTPRU-203ENST00000415600 TADA2BQ86TJ2 420 aa21.59■■□□□ 1.05
PTPRU-203ENST00000415600 C12orf29Q8N999 325 aa21.59■■□□□ 1.05
PTPRU-203ENST00000415600 FBXL13Q8NEE6 735 aa21.59■■□□□ 1.05
PTPRU-203ENST00000415600 NELFBQ8WX92 580 aa21.59■■□□□ 1.05
PTPRU-203ENST00000415600 ELMO3Q96BJ8 720 aa21.59■■□□□ 1.05
PTPRU-203ENST00000415600 CYFIP2Q96F07 1278 aa21.59■■□□□ 1.05
PTPRU-203ENST00000415600 PNKPQ96T60 521 aa21.59■■□□□ 1.05
PTPRU-203ENST00000415600 SMOQ99835 787 aa21.59■■□□□ 1.05
PTPRU-203ENST00000415600 SAMSN1Q9NSI8 373 aaKnown RBP21.59■■□□□ 1.05
PTPRU-203ENST00000415600 GMIPQ9P107 970 aa21.59■■□□□ 1.05
PTPRU-203ENST00000415600 CACNA1AO00555 2505 aa21.58■■□□□ 1.05
PTPRU-203ENST00000415600 TLR5O60602 858 aa21.58■■□□□ 1.05
PTPRU-203ENST00000415600 APODP05090 189 aa21.58■■□□□ 1.05
PTPRU-203ENST00000415600 ZDHHC11BP0C7U3 371 aa21.58■■□□□ 1.05
PTPRU-203ENST00000415600 ADH5P11766 374 aa21.58■■□□□ 1.05
PTPRU-203ENST00000415600 SLC8A3P57103 927 aa21.58■■□□□ 1.05
PTPRU-203ENST00000415600 ZXDBP98169 803 aa21.58■■□□□ 1.05
PTPRU-203ENST00000415600 ORC1Q13415 861 aa21.58■■□□□ 1.05
PTPRU-203ENST00000415600 DMC1Q14565 340 aa21.58■■□□□ 1.05
PTPRU-203ENST00000415600 CSRP2Q16527 193 aa21.58■■□□□ 1.05
PTPRU-203ENST00000415600 HSF5Q4G112 596 aaPredicted RBP21.58■■□□□ 1.05
PTPRU-203ENST00000415600 CDKAL1Q5VV42 579 aa21.58■■□□□ 1.05
PTPRU-203ENST00000415600 C11orf74Q86VG3 221 aa21.58■■□□□ 1.05
PTPRU-203ENST00000415600 FAM160A2Q8N612 972 aaPredicted RBP21.58■■□□□ 1.05
PTPRU-203ENST00000415600 TSTD1Q8NFU3 115 aa21.58■■□□□ 1.05
PTPRU-203ENST00000415600 DUSP9Q99956 384 aaKnown RBP21.58■■□□□ 1.05
PTPRU-203ENST00000415600 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.58■■□□□ 1.05
PTPRU-203ENST00000415600 IMPACTQ9P2X3 320 aa21.58■■□□□ 1.05
PTPRU-203ENST00000415600 HMGXB4Q9UGU5 601 aa21.58■■□□□ 1.05
PTPRU-203ENST00000415600 SLC16A3O15427 465 aaKnown RBP21.57■■□□□ 1.04
PTPRU-203ENST00000415600 CILPO75339 1184 aa21.57■■□□□ 1.04
PTPRU-203ENST00000415600 CD58P19256 250 aa21.57■■□□□ 1.04
PTPRU-203ENST00000415600 CDK11BP21127 795 aaKnown RBP21.57■■□□□ 1.04
PTPRU-203ENST00000415600 PSEN1P49768 467 aa21.57■■□□□ 1.04
PTPRU-203ENST00000415600 MRPS21P82921 87 aaKnown RBP21.57■■□□□ 1.04
PTPRU-203ENST00000415600 FKBP3Q00688 224 aaKnown RBP21.57■■□□□ 1.04
PTPRU-203ENST00000415600 GAD2Q05329 585 aa21.57■■□□□ 1.04
PTPRU-203ENST00000415600 SRSF5Q13243 272 aaKnown RBP21.57■■□□□ 1.04
PTPRU-203ENST00000415600 DHTKD1Q96HY7 919 aaPredicted RBP21.57■■□□□ 1.04
PTPRU-203ENST00000415600 HHIPQ96QV1 700 aa21.57■■□□□ 1.04
PTPRU-203ENST00000415600 CDK5RAP1Q96SZ6 601 aaKnown RBP21.57■■□□□ 1.04
PTPRU-203ENST00000415600 SEMA4GQ9NTN9 838 aa21.57■■□□□ 1.04
PTPRU-203ENST00000415600 EBF1Q9UH73 591 aa21.57■■□□□ 1.04
PTPRU-203ENST00000415600 LSM7Q9UK45 103 aaKnown RBP21.57■■□□□ 1.04
PTPRU-203ENST00000415600 SCML2Q9UQR0 700 aa21.57■■□□□ 1.04
PTPRU-203ENST00000415600 PSMA7O14818 248 aa21.57■■□□□ 1.04
PTPRU-203ENST00000415600 ALDH1A2O94788 518 aa21.57■■□□□ 1.04
PTPRU-203ENST00000415600 ATP5C1P36542 298 aaKnown RBP21.57■■□□□ 1.04
PTPRU-203ENST00000415600 OPRD1P41143 372 aa21.57■■□□□ 1.04
PTPRU-203ENST00000415600 PXNP49023 591 aaPredicted RBP21.57■■□□□ 1.04
PTPRU-203ENST00000415600 ELF2Q15723 593 aa21.57■■□□□ 1.04
PTPRU-203ENST00000415600 TCERG1LQ5VWI1 586 aa21.57■■□□□ 1.04
PTPRU-203ENST00000415600 NAIF1Q69YI7 327 aaPredicted RBP21.57■■□□□ 1.04
PTPRU-203ENST00000415600 NETO1Q8TDF5 533 aa21.57■■□□□ 1.04
PTPRU-203ENST00000415600 RTKNQ9BST9 563 aa21.57■■□□□ 1.04
PTPRU-203ENST00000415600 CCSER2Q9H7U1 834 aa21.57■■□□□ 1.04
PTPRU-203ENST00000415600 RAB20Q9NX57 234 aa21.57■■□□□ 1.04
PTPRU-203ENST00000415600 GRIA2P42262 883 aa21.56■■□□□ 1.04
PTPRU-203ENST00000415600 MCCD1P59942 119 aaPredicted RBP21.56■■□□□ 1.04
PTPRU-203ENST00000415600 YWHAEP62258 255 aaKnown RBP21.56■■□□□ 1.04
PTPRU-203ENST00000415600 LRRC63Q05C16 580 aa21.56■■□□□ 1.04
PTPRU-203ENST00000415600 RHBDF2Q6PJF5 856 aa21.56■■□□□ 1.04
PTPRU-203ENST00000415600 CLEC20AQ6ZU45 233 aa21.56■■□□□ 1.04
PTPRU-203ENST00000415600 ZMIZ2Q8NF64 920 aa21.56■■□□□ 1.04
PTPRU-203ENST00000415600 USP33Q8TEY7 942 aa21.56■■□□□ 1.04
PTPRU-203ENST00000415600 HEXIM2Q96MH2 286 aaKnown RBP21.56■■□□□ 1.04
PTPRU-203ENST00000415600 ZNF830Q96NB3 372 aaPredicted RBP21.56■■□□□ 1.04
PTPRU-203ENST00000415600 KCNF1Q9H3M0 494 aa21.56■■□□□ 1.04
PTPRU-203ENST00000415600 APOBEC3GQ9HC16 384 aaKnown RBP21.56■■□□□ 1.04
PTPRU-203ENST00000415600 RHOBTB1O94844 696 aa21.55■■□□□ 1.04
PTPRU-203ENST00000415600 ACO1P21399 889 aaKnown RBP21.55■■□□□ 1.04
PTPRU-203ENST00000415600 DGKEP52429 567 aa21.55■■□□□ 1.04
PTPRU-203ENST00000415600 TPD52L1Q16890 204 aaPredicted RBP21.55■■□□□ 1.04
PTPRU-203ENST00000415600 C2orf27AQ580R0 203 aa21.55■■□□□ 1.04
PTPRU-203ENST00000415600 JAKMIP2Q96AA8 810 aa21.55■■□□□ 1.04
PTPRU-203ENST00000415600 NAP1L5Q96NT1 182 aaPredicted RBP21.55■■□□□ 1.04
PTPRU-203ENST00000415600 DUSP16Q9BY84 665 aa21.55■■□□□ 1.04
PTPRU-203ENST00000415600 PARD6AQ9NPB6 346 aa21.55■■□□□ 1.04
PTPRU-203ENST00000415600 CYLDQ9NQC7 956 aa21.55■■□□□ 1.04
PTPRU-203ENST00000415600 ARHGEF4Q9NR80 690 aa21.55■■□□□ 1.04
PTPRU-203ENST00000415600 PCDHGA5Q9Y5G8 931 aa21.55■■□□□ 1.04
PTPRU-203ENST00000415600 MYH10P35580 1976 aa21.54■■□□□ 1.04
PTPRU-203ENST00000415600 BEST1O76090 585 aa21.54■■□□□ 1.04
PTPRU-203ENST00000415600 KAT7O95251 611 aa21.54■■□□□ 1.04
PTPRU-203ENST00000415600 RALAP11233 206 aa21.54■■□□□ 1.04
PTPRU-203ENST00000415600 TGM1P22735 817 aa21.54■■□□□ 1.04
PTPRU-203ENST00000415600 TNFRSF4P43489 277 aa21.54■■□□□ 1.04
PTPRU-203ENST00000415600 SEC13P55735 322 aa21.54■■□□□ 1.04
PTPRU-203ENST00000415600 GSDMDP57764 484 aa21.54■■□□□ 1.04
PTPRU-203ENST00000415600 USP39Q53GS9 565 aaKnown RBP21.54■■□□□ 1.04
PTPRU-203ENST00000415600 DCAF17Q5H9S7 520 aaPredicted RBP21.54■■□□□ 1.04
PTPRU-203ENST00000415600 LY6G5CQ5SRR4 150 aa21.54■■□□□ 1.04
PTPRU-203ENST00000415600 KLHDC10Q6PID8 442 aa21.54■■□□□ 1.04
PTPRU-203ENST00000415600 PRR23CQ6ZRP0 262 aa21.54■■□□□ 1.04
PTPRU-203ENST00000415600 TRMT11Q7Z4G4 463 aaKnown RBP21.54■■□□□ 1.04
PTPRU-203ENST00000415600 C12orf50Q8NA57 414 aaPredicted RBP21.54■■□□□ 1.04
PTPRU-203ENST00000415600 TWNKQ96RR1 684 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms