RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 SP9P0CG40 484 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 CHRNB1P11230 501 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 IFNAR2P48551 515 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 MTAPQ13126 283 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 NNTQ13423 1086 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 GAS6Q14393 721 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 FOXR2Q6PJQ5 311 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 TSSK4Q6SA08 328 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 Q6ZS52 159 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 TRIM59Q8IWR1 403 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 PDZD8Q8NEN9 1154 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 OSCP1Q8WVF1 389 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 HPS1Q92902 700 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 MSANTD3Q96H12 275 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 TMEM176AQ96HP8 235 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 HEXIM2Q96MH2 286 aaKnown RBP10.14□□□□□ -0.79
LINC01090-201ENST00000415357 NELL2Q99435 816 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 IRF2BPLQ9H1B7 796 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 LINC00597Q9H2U6 94 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 CHRDQ9H2X0 955 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 LMBRD1Q9NUN5 540 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 DUS2Q9NX74 493 aaKnown RBP10.14□□□□□ -0.79
LINC01090-201ENST00000415357 IL37Q9NZH6 218 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 R4GN57 208 aa10.14□□□□□ -0.79
LINC01090-201ENST00000415357 F5P12259 2224 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 FAM92AA1XBS5 289 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 COCHO43405 550 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 LAMTOR5O43504 91 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 CALCAP01258 141 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 ZDHHC11BP0C7U3 371 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 IRF1P10914 325 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 MBL2P11226 248 aaPredicted RBP10.13□□□□□ -0.79
LINC01090-201ENST00000415357 TRIM21P19474 475 aaKnown RBP10.13□□□□□ -0.79
LINC01090-201ENST00000415357 ACO1P21399 889 aaKnown RBP10.13□□□□□ -0.79
LINC01090-201ENST00000415357 NBL1P41271 181 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 MAGEA9P43362 315 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 RPS9P46781 194 aaKnown RBP10.13□□□□□ -0.79
LINC01090-201ENST00000415357 PPP3CCP48454 512 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 PDE6CP51160 858 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 MLLT6P55198 1093 aaPredicted RBP10.13□□□□□ -0.79
LINC01090-201ENST00000415357 SLC7A9P82251 487 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 CSTF1Q05048 431 aaKnown RBP10.13□□□□□ -0.79
LINC01090-201ENST00000415357 PDGFRLQ15198 375 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 EML3Q32P44 896 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 ASCL5Q7RTU5 278 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 TTC30AQ86WT1 665 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 RALGPS2Q86X27 583 aaPredicted RBP10.13□□□□□ -0.79
LINC01090-201ENST00000415357 ARHGEF19Q8IW93 802 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 PPM1KQ8N3J5 372 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 UBR7Q8N806 425 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 LMO3Q8TAP4 145 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 OVCA2Q8WZ82 227 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 WBP2Q969T9 261 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 FAXDC2Q96IV6 333 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 CNOT6LQ96LI5 555 aaKnown RBP10.13□□□□□ -0.79
LINC01090-201ENST00000415357 NT5C1BQ96P26 610 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 KCTD15Q96SI1 283 aaPredicted RBP10.13□□□□□ -0.79
LINC01090-201ENST00000415357 NUP62CLQ9H1M0 184 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 NMUR1Q9HB89 426 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 OSER1Q9NX31 292 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 CFAP97Q9P2B7 532 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 RWDD2AQ9UIY3 292 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 MYH10P35580 1976 aa10.13□□□□□ -0.79
LINC01090-201ENST00000415357 A0A1W2PQH9 124 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 TULP2O00295 520 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 MDM4O15151 490 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 TLR5O60602 858 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 TBX18O95935 607 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 AFPP02771 609 aaKnown RBP10.12□□□□□ -0.79
LINC01090-201ENST00000415357 CD19P15391 556 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 TCF3P15923 654 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 PFKLP17858 780 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 HOXC13P31276 330 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 GJA4P35212 333 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 MARSP56192 900 aaKnown RBP10.12□□□□□ -0.79
LINC01090-201ENST00000415357 RAB15P59190 212 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 SATB1Q01826 763 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 GOLGA7BQ2TAP0 167 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 DPCR1Q3MIW9 517 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 HECTD3Q5T447 861 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 SNX30Q5VWJ9 437 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 FSTL4Q6MZW2 842 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 PKN3Q6P5Z2 889 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 CLEC17AQ6ZS10 378 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 RRAGAQ7L523 313 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 IRF2BP1Q8IU81 584 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 CREBRFQ8IUR6 639 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 CPA6Q8N4T0 437 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 TTC39CQ8N584 583 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 DUSP16Q9BY84 665 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 INTS2Q9H0H0 1204 aaKnown RBP10.12□□□□□ -0.79
LINC01090-201ENST00000415357 FBXO44Q9H4M3 255 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 ECT2Q9H8V3 914 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 FBRSL1Q9HCM7 1045 aaKnown RBP10.12□□□□□ -0.79
LINC01090-201ENST00000415357 C2orf42Q9NWW7 574 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 COMMD8Q9NX08 183 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 NUDT5Q9UKK9 219 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 TSPAN16Q9UKR8 245 aa10.12□□□□□ -0.79
LINC01090-201ENST00000415357 CDV3Q9UKY7 258 aaKnown RBP10.12□□□□□ -0.79
LINC01090-201ENST00000415357 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms