RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 NSL1Q96IY1 281 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 CCDC106Q9BWC9 280 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 OSBPL1AQ9BXW6 950 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 RNPEPQ9H4A4 650 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 GBA2Q9HCG7 927 aaPredicted RBP10.26□□□□□ -0.77
SS18-203ENST00000415083 MTMR10Q9NXD2 777 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 SIRPGQ9P1W8 387 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 MYO18AQ92614 2054 aaKnown RBP10.26□□□□□ -0.77
SS18-203ENST00000415083 TSC2P49815 1807 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 KLF11O14901 512 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 SNNO75324 88 aaPredicted RBP10.26□□□□□ -0.77
SS18-203ENST00000415083 HAUS5O94927 633 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 MT-ND3P03897 115 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 PGK2P07205 417 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 CETN2P41208 172 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 CDH6P55285 790 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 INHBEP58166 350 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 TRPC3Q13507 836 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 PRKG1Q13976 671 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 KRT72Q14CN4 511 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 RCN1Q15293 331 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 IER5Q5VY09 327 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 OR52E8Q6IFG1 317 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 PMF1Q6P1K2 205 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 ILDR2Q71H61 639 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 TTC30AQ86WT1 665 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 CCDC110Q8TBZ0 833 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 CLEC4CQ8WTT0 213 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 CPB2Q96IY4 423 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 PPP1R16BQ96T49 567 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 YIPF3Q9GZM5 350 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 E7ENQ6 273 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 M0QYV0 167 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 ITM2AO43736 263 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 F7P08709 466 aaPredicted RBP10.26□□□□□ -0.77
SS18-203ENST00000415083 KRT19P08727 400 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 TSHRP16473 764 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 PHBP35232 272 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 PCK1P35558 622 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 ROR1Q01973 937 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 CDO1Q16878 200 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 SH3D19Q5HYK7 790 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 FAM102AQ5T9C2 384 aaPredicted RBP10.26□□□□□ -0.77
SS18-203ENST00000415083 SLC9A4Q6AI14 798 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 DARS2Q6PI48 645 aaKnown RBP10.26□□□□□ -0.77
SS18-203ENST00000415083 OLFML1Q6UWY5 402 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 ZCCHC23Q6ZST2 131 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 PDIK1LQ8N165 341 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 PANX3Q96QZ0 392 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 C11orf84Q9BUA3 381 aaPredicted RBP10.26□□□□□ -0.77
SS18-203ENST00000415083 B3GNT5Q9BYG0 378 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 FRMD8P1Q9BZ68 369 aaPredicted RBP10.26□□□□□ -0.77
SS18-203ENST00000415083 PCDH18Q9HCL0 1135 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 TXNRD2Q9NNW7 524 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 RAB6BQ9NRW1 208 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 ZFATQ9P243 1243 aa10.26□□□□□ -0.77
SS18-203ENST00000415083 PDCD11Q14690 1871 aaKnown RBP10.25□□□□□ -0.77
SS18-203ENST00000415083 CCDC195A0A1B0GUA6 201 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 CHADO15335 359 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 PSMG1O95456 288 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 ACADSP16219 412 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 ALDH3A1P30838 453 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 CPOXP36551 454 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 EFNA5P52803 228 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 METTL7BQ6UX53 244 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 TTC13Q8NBP0 860 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 NLRP4Q96MN2 994 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 TRIM55Q9BYV6 548 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 PDGFCQ9NRA1 345 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 ETNK2Q9NVF9 386 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 C19orf81C9J6K1 198 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 KCNN4O15554 427 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 USP2O75604 605 aaPredicted RBP10.25□□□□□ -0.77
SS18-203ENST00000415083 RGS7P49802 495 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 HDAC4P56524 1084 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 SESN3P58005 492 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 YWHAGP61981 247 aaKnown RBP eCLIP10.25□□□□□ -0.77
SS18-203ENST00000415083 GBE1Q04446 702 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 CAPRIN2Q6IMN6 1127 aaKnown RBP10.25□□□□□ -0.77
SS18-203ENST00000415083 LINC01465Q8N7H1 131 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 PPM1NQ8N819 430 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 RBM15BQ8NDT2 890 aaKnown RBP10.25□□□□□ -0.77
SS18-203ENST00000415083 ARMC2Q8NEN0 867 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.25□□□□□ -0.77
SS18-203ENST00000415083 DTX3LQ8TDB6 740 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 SEPT1Q8WYJ6 367 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 PDZD7Q9H5P4 517 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 DCLRE1BQ9H816 532 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 NRBP2Q9NSY0 501 aa10.25□□□□□ -0.77
SS18-203ENST00000415083 CCDC22O60826 627 aa10.24□□□□□ -0.77
SS18-203ENST00000415083 STAG3L1P0CL83 205 aa10.24□□□□□ -0.77
SS18-203ENST00000415083 NDST1P52848 882 aa10.24□□□□□ -0.77
SS18-203ENST00000415083 Q3C1V9 767 aa10.24□□□□□ -0.77
SS18-203ENST00000415083 GJC2Q5T442 439 aaPredicted RBP10.24□□□□□ -0.77
SS18-203ENST00000415083 SNX30Q5VWJ9 437 aa10.24□□□□□ -0.77
SS18-203ENST00000415083 CCDC62Q6P9F0 684 aa10.24□□□□□ -0.77
SS18-203ENST00000415083 SLC26A11Q86WA9 606 aa10.24□□□□□ -0.77
SS18-203ENST00000415083 ZNF483Q8TF39 744 aaPredicted RBP10.24□□□□□ -0.77
SS18-203ENST00000415083 ALKBH8Q96BT7 664 aaKnown RBP10.24□□□□□ -0.77
SS18-203ENST00000415083 FAF2Q96CS3 445 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms