RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 ZCWPW1Q9H0M4 648 aa14.4□□□□□ -0.1
RAPGEF1-204ENST00000414781 THAP9Q9H5L6 903 aa14.4□□□□□ -0.1
RAPGEF1-204ENST00000414781 PLEKHA5Q9HAU0 1116 aa14.4□□□□□ -0.1
RAPGEF1-204ENST00000414781 AGPAT3Q9NRZ7 376 aa14.4□□□□□ -0.1
RAPGEF1-204ENST00000414781 MAGEC2Q9UBF1 373 aaPredicted RBP14.4□□□□□ -0.1
RAPGEF1-204ENST00000414781 UBQLN1Q9UMX0 589 aaKnown RBP14.4□□□□□ -0.1
RAPGEF1-204ENST00000414781 PTPRDP23468 1912 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 NR3C1P04150 777 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 CHRM1P11229 460 aaPredicted RBP14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 PRKCSHP14314 528 aaPredicted RBP14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 CDK11BP21127 795 aaKnown RBP14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 TNFRSF4P43489 277 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 PDE6CP51160 858 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 SPAG1Q07617 926 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 IQCB1Q15051 598 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 TAF1BQ53T94 588 aaPredicted RBP14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 TAS1R3Q7RTX0 852 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 FILIP1Q7Z7B0 1213 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 AOPEPQ8N6M6 819 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 FAM181AQ8N9Y4 354 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 TTC16Q8NEE8 873 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 OR10T2Q8NGX3 314 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 KCNV2Q8TDN2 545 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 SH3RF2Q8TEC5 729 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 POMGNT1Q8WZA1 660 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 ZNF419Q96HQ0 510 aaPredicted RBP14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 TARS2Q9BW92 718 aaKnown RBP14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 PRDM16Q9HAZ2 1276 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 CALCOCO1Q9P1Z2 691 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 DSEQ9UL01 958 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 FRMD4BQ9Y2L6 1034 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 NFE2L3Q9Y4A8 694 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 STYXL1Q9Y6J8 313 aa14.39□□□□□ -0.11
RAPGEF1-204ENST00000414781 TRIP11Q15643 1979 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 A0A0A0MRY4 1105 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 IGHV1OR15-9A0A0B4J2B8 117 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 A0A1B0GTW7 788 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 FAM149AA5PLN7 773 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 GOLGA6L3A6NEY3 463 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 B8ZZF3 427 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 EXOC3O60645 756 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 ADAM23O75077 832 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 KAT7O95251 611 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 NR2F2P24468 414 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 GRIA2P42262 883 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 MATR3P43243 847 aaKnown RBP eCLIP14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 KIR2DL1P43626 348 aaPredicted RBP14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 GSE1Q14687 1217 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 SLC10A6Q3KNW5 377 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 PCSK4Q6UW60 755 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 TMPRSS12Q86WS5 348 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 MARCH9Q86YJ5 346 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 DHX40Q8IX18 779 aaKnown RBP14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 XXYLT1Q8NBI6 393 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 RHBDD1Q8TEB9 315 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 SRRTQ9BXP5 876 aaKnown RBP14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 METTL14Q9HCE5 456 aaKnown RBP14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 TRPC7Q9HCX4 862 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 TM7SF3Q9NS93 570 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 ARHGAP26Q9UNA1 814 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 ADAMTS9Q9P2N4 1935 aa14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 GOLGA4Q13439 2230 aaKnown RBP14.38□□□□□ -0.11
RAPGEF1-204ENST00000414781 TRIM49BA6NDI0 452 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 ABLIM1O14639 778 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 CLIC2O15247 247 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 TNFSF14O43557 240 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 NDUFS2O75306 463 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 CYP11A1P05108 521 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 TPM2P07951 284 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 EPB41P11171 864 aaKnown RBP14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 HARSP12081 509 aaKnown RBP14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 GABRG2P18507 467 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 PSMC2P35998 433 aaKnown RBP14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 MATKP42679 507 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 PMS1P54277 932 aaKnown RBP14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 POU5F1Q01860 360 aaKnown RBP14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 RHDQ02161 417 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 NOLC1Q14978 699 aaKnown RBP eCLIP14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 SUZ12Q15022 739 aaKnown RBP14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 GAB4Q2WGN9 574 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 PREPLQ4J6C6 727 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 C6orf118Q5T5N4 469 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 DBX2Q6ZNG2 339 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 LUZP1Q86V48 1076 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 GAS2L3Q86XJ1 694 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 RNF214Q8ND24 703 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 SNIP1Q8TAD8 396 aaKnown RBP14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 TRMT2BQ96GJ1 504 aaKnown RBP14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 SENP8Q96LD8 212 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 TSPAN18Q96SJ8 248 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 DUSP9Q99956 384 aaKnown RBP14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 MSTO1Q9BUK6 570 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 LINC00597Q9H2U6 94 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 GAREM1Q9H706 876 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 FANCLQ9NW38 375 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 DMAC2Q9NW81 257 aa14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 ABI2Q9NYB9 513 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 MAGED2Q9UNF1 606 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF1-204ENST00000414781 A0A0B4J269 797 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms