RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 DMDP11532 3685 aa17.86■□□□□ 0.45
SCAMP4-204ENST00000414057 A8MXQ7 604 aa17.86■□□□□ 0.45
SCAMP4-204ENST00000414057 AKR1B10O60218 316 aa17.86■□□□□ 0.45
SCAMP4-204ENST00000414057 ASS1P00966 412 aaKnown RBP17.86■□□□□ 0.45
SCAMP4-204ENST00000414057 CKMP06732 381 aa17.86■□□□□ 0.45
SCAMP4-204ENST00000414057 P4HA1P13674 534 aa17.86■□□□□ 0.45
SCAMP4-204ENST00000414057 KIF11P52732 1056 aa17.86■□□□□ 0.45
SCAMP4-204ENST00000414057 MYL6P60660 151 aa17.86■□□□□ 0.45
SCAMP4-204ENST00000414057 TNK2Q07912 1038 aa17.86■□□□□ 0.45
SCAMP4-204ENST00000414057 ASTE1Q2TB18 679 aaPredicted RBP17.86■□□□□ 0.45
SCAMP4-204ENST00000414057 ZNF667Q5HYK9 610 aa17.86■□□□□ 0.45
SCAMP4-204ENST00000414057 TSSK4Q6SA08 328 aa17.86■□□□□ 0.45
SCAMP4-204ENST00000414057 STKLD1Q8NE28 680 aa17.86■□□□□ 0.45
SCAMP4-204ENST00000414057 ELOVL4Q9GZR5 314 aa17.86■□□□□ 0.45
SCAMP4-204ENST00000414057 NUP210Q8TEM1 1887 aaPredicted RBP17.86■□□□□ 0.45
SCAMP4-204ENST00000414057 TICRRQ7Z2Z1 1910 aa17.85■□□□□ 0.45
SCAMP4-204ENST00000414057 COL4A2P08572 1712 aa17.85■□□□□ 0.45
SCAMP4-204ENST00000414057 LILRB5O75023 590 aa17.85■□□□□ 0.45
SCAMP4-204ENST00000414057 TADA3O75528 432 aa17.85■□□□□ 0.45
SCAMP4-204ENST00000414057 PTPN1P18031 435 aaKnown RBP17.85■□□□□ 0.45
SCAMP4-204ENST00000414057 NOP14P78316 857 aaKnown RBP17.85■□□□□ 0.45
SCAMP4-204ENST00000414057 ARHGAP44Q17R89 818 aa17.85■□□□□ 0.45
SCAMP4-204ENST00000414057 CCDC142Q17RM4 750 aa17.85■□□□□ 0.45
SCAMP4-204ENST00000414057 ZNF699Q32M78 642 aa17.85■□□□□ 0.45
SCAMP4-204ENST00000414057 MDH1BQ5I0G3 518 aa17.85■□□□□ 0.45
SCAMP4-204ENST00000414057 ZNF662Q6ZS27 426 aa17.85■□□□□ 0.45
SCAMP4-204ENST00000414057 FAM71AQ8IYT1 594 aa17.85■□□□□ 0.45
SCAMP4-204ENST00000414057 C17orf53Q8N3J3 647 aaPredicted RBP17.85■□□□□ 0.45
SCAMP4-204ENST00000414057 SUMF1Q8NBK3 374 aa17.85■□□□□ 0.45
SCAMP4-204ENST00000414057 C8orf48Q96LL4 319 aa17.85■□□□□ 0.45
SCAMP4-204ENST00000414057 HAUS4Q9H6D7 363 aa17.85■□□□□ 0.45
SCAMP4-204ENST00000414057 TRPM5Q9NZQ8 1165 aa17.85■□□□□ 0.45
SCAMP4-204ENST00000414057 NCDNQ9UBB6 729 aa17.85■□□□□ 0.45
SCAMP4-204ENST00000414057 CCL26Q9Y258 94 aa17.85■□□□□ 0.45
SCAMP4-204ENST00000414057 ATP8B3O60423 1300 aa17.84■□□□□ 0.45
SCAMP4-204ENST00000414057 FOXN3O00409 490 aaPredicted RBP17.84■□□□□ 0.45
SCAMP4-204ENST00000414057 HDCP19113 662 aa17.84■□□□□ 0.45
SCAMP4-204ENST00000414057 GRSF1Q12849 480 aaKnown RBP eCLIP17.84■□□□□ 0.45
SCAMP4-204ENST00000414057 PON2Q15165 354 aa17.84■□□□□ 0.45
SCAMP4-204ENST00000414057 C10orf76Q5T2E6 689 aa17.84■□□□□ 0.45
SCAMP4-204ENST00000414057 TXNDC11Q6PKC3 985 aa17.84■□□□□ 0.45
SCAMP4-204ENST00000414057 REXO1L1PQ8IX06 675 aa17.84■□□□□ 0.45
SCAMP4-204ENST00000414057 CPA6Q8N4T0 437 aa17.84■□□□□ 0.45
SCAMP4-204ENST00000414057 GPR161Q8N6U8 529 aaKnown RBP17.84■□□□□ 0.45
SCAMP4-204ENST00000414057 TNIP3Q96KP6 325 aa17.84■□□□□ 0.45
SCAMP4-204ENST00000414057 KREMEN1Q96MU8 473 aa17.84■□□□□ 0.45
SCAMP4-204ENST00000414057 DESI2Q9BSY9 194 aa17.84■□□□□ 0.45
SCAMP4-204ENST00000414057 XYLT2Q9H1B5 865 aa17.84■□□□□ 0.45
SCAMP4-204ENST00000414057 EPC1Q9H2F5 836 aa17.84■□□□□ 0.45
SCAMP4-204ENST00000414057 EBF3Q9H4W6 596 aa17.84■□□□□ 0.45
SCAMP4-204ENST00000414057 FAM124BQ9H5Z6 455 aaPredicted RBP17.84■□□□□ 0.45
SCAMP4-204ENST00000414057 TRMT1Q9NXH9 659 aaKnown RBP17.84■□□□□ 0.45
SCAMP4-204ENST00000414057 RAB23Q9ULC3 237 aa17.84■□□□□ 0.45
SCAMP4-204ENST00000414057 PATJQ8NI35 1801 aa17.83■□□□□ 0.45
SCAMP4-204ENST00000414057 USP27XA6NNY8 438 aa17.83■□□□□ 0.45
SCAMP4-204ENST00000414057 PAPSS2O95340 614 aaPredicted RBP17.83■□□□□ 0.45
SCAMP4-204ENST00000414057 PLEKP08567 350 aaPredicted RBP17.83■□□□□ 0.45
SCAMP4-204ENST00000414057 YWHAEP62258 255 aaKnown RBP17.83■□□□□ 0.45
SCAMP4-204ENST00000414057 ARID5AQ03989 594 aa17.83■□□□□ 0.45
SCAMP4-204ENST00000414057 CUL2Q13617 745 aa17.83■□□□□ 0.45
SCAMP4-204ENST00000414057 CCINQ13939 588 aa17.83■□□□□ 0.45
SCAMP4-204ENST00000414057 SLC18A3Q16572 532 aa17.83■□□□□ 0.45
SCAMP4-204ENST00000414057 B3GALNT2Q8NCR0 500 aa17.83■□□□□ 0.45
SCAMP4-204ENST00000414057 OSCP1Q8WVF1 389 aa17.83■□□□□ 0.45
SCAMP4-204ENST00000414057 TATDN2Q93075 761 aa17.83■□□□□ 0.45
SCAMP4-204ENST00000414057 SLITRK1Q96PX8 696 aa17.83■□□□□ 0.45
SCAMP4-204ENST00000414057 RRAGDQ9NQL2 400 aaPredicted RBP17.83■□□□□ 0.45
SCAMP4-204ENST00000414057 DUS2Q9NX74 493 aaKnown RBP17.83■□□□□ 0.45
SCAMP4-204ENST00000414057 VPS13AQ96RL7 3174 aa17.83■□□□□ 0.45
SCAMP4-204ENST00000414057 F8VP50 259 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 ATG13O75143 517 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 CNR2P34972 360 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 IFNAR2P48551 515 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 BPIFB4P59827 614 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 PTK2Q05397 1052 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 NR1H3Q13133 447 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 NYAP1Q6ZVC0 841 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 ARL14EPQ8N8R7 260 aaPredicted RBP17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 ACRBPQ8NEB7 543 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 ATP2A3Q93084 1043 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 CYP2S1Q96SQ9 504 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 TTLL2Q9BWV7 592 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 TSGA10Q9BZW7 698 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 NIF3L1Q9GZT8 377 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 HPS4Q9NQG7 708 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 RBM12Q9NTZ6 932 aaKnown RBP17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 ARHGAP26Q9UNA1 814 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 CACNA1IQ9P0X4 2223 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 TRDMT1O14717 391 aaKnown RBP17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 TDGF1P13385 188 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 TCF3P15923 654 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 DRD1P21728 446 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 ID4P47928 161 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 VAV2P52735 878 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 SATB1Q01826 763 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 ZNF77Q15935 545 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 TMEM196Q5HYL7 178 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 TRIM68Q6AZZ1 485 aa17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 ZNF571Q7Z3V5 609 aaPredicted RBP17.82■□□□□ 0.44
SCAMP4-204ENST00000414057 KIAA1958Q8N8K9 716 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms