RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 IFRD2Q12894 506 aaPredicted RBP19.47■□□□□ 0.71
CIRBP-202ENST00000413636 ADAM15Q13444 863 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 MAMLD1Q13495 774 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 VEPH1Q14D04 833 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 C2CD6Q53TS8 623 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 FBXO38Q6PIJ6 1188 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 MMS22LQ6ZRQ5 1243 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 DENND5BQ6ZUT9 1274 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 RTL10Q7L3V2 364 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 IPO4Q8TEX9 1081 aaKnown RBP19.47■□□□□ 0.71
CIRBP-202ENST00000413636 MS4A14Q96JA4 679 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 MIS12Q9H081 205 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 SYNCQ9H7C4 482 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 MTMR10Q9NXD2 777 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 WDR35Q9P2L0 1181 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 CCDC151A5D8V7 595 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 ERLIN1O75477 346 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 ERBB2P04626 1255 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 HNRNPA1P09651 372 aaKnown RBP eCLIP19.47■□□□□ 0.71
CIRBP-202ENST00000413636 RHOXF2BP0C7M4 288 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 HOXA9P31269 272 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 ACADSBP45954 432 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 USP46P62068 366 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 C2orf54Q08AI8 447 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 WDR93Q6P2C0 686 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 TMEM184AQ6ZMB5 413 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 TMEM110Q86TL2 294 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 C12orf76Q8N812 135 aaPredicted RBP19.47■□□□□ 0.71
CIRBP-202ENST00000413636 CD101Q93033 1021 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 CEP295NLQ96MC4 621 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 RHOXF2Q9BQY4 288 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 CYLDQ9NQC7 956 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 DZANK1Q9NVP4 752 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 ZDHHC7Q9NXF8 308 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 MAGED2Q9UNF1 606 aaPredicted RBP19.47■□□□□ 0.71
CIRBP-202ENST00000413636 PCDHA3Q9Y5H8 950 aa19.47■□□□□ 0.71
CIRBP-202ENST00000413636 MYO16Q9Y6X6 1858 aa19.46■□□□□ 0.71
CIRBP-202ENST00000413636 CCDC195A0A1B0GUA6 201 aa19.46■□□□□ 0.71
CIRBP-202ENST00000413636 TMEM110-MUSTN1A8MSY1 372 aa19.46■□□□□ 0.71
CIRBP-202ENST00000413636 CCDC188H7C350 402 aa19.46■□□□□ 0.71
CIRBP-202ENST00000413636 CSH1P0DML2 217 aa19.46■□□□□ 0.71
CIRBP-202ENST00000413636 CSH2P0DML3 217 aa19.46■□□□□ 0.71
CIRBP-202ENST00000413636 SRGAP2BP0DMP2 458 aa19.46■□□□□ 0.71
CIRBP-202ENST00000413636 FOSL2P15408 326 aa19.46■□□□□ 0.71
CIRBP-202ENST00000413636 CTNNA1P35221 906 aaKnown RBP19.46■□□□□ 0.71
CIRBP-202ENST00000413636 TAF12Q16514 161 aa19.46■□□□□ 0.71
CIRBP-202ENST00000413636 PPP2R5EQ16537 467 aa19.46■□□□□ 0.71
CIRBP-202ENST00000413636 CYP4A22Q5TCH4 519 aa19.46■□□□□ 0.71
CIRBP-202ENST00000413636 DNAJB7Q7Z6W7 309 aaPredicted RBP19.46■□□□□ 0.71
CIRBP-202ENST00000413636 ITIH5Q86UX2 942 aa19.46■□□□□ 0.71
CIRBP-202ENST00000413636 SIX6OS1Q8N1H7 587 aa19.46■□□□□ 0.71
CIRBP-202ENST00000413636 ELMOD1Q8N336 334 aa19.46■□□□□ 0.71
CIRBP-202ENST00000413636 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.46■□□□□ 0.71
CIRBP-202ENST00000413636 FEZF2Q8TBJ5 459 aa19.46■□□□□ 0.71
CIRBP-202ENST00000413636 PSMG2Q969U7 264 aa19.46■□□□□ 0.71
CIRBP-202ENST00000413636 SFXN1Q9H9B4 322 aa19.46■□□□□ 0.71
CIRBP-202ENST00000413636 CHORDC1Q9UHD1 332 aaPredicted RBP19.46■□□□□ 0.71
CIRBP-202ENST00000413636 TMEM59LQ9UK28 342 aa19.46■□□□□ 0.71
CIRBP-202ENST00000413636 ASB3Q9Y575 518 aa19.46■□□□□ 0.71
CIRBP-202ENST00000413636 RTN3O95197 1032 aaPredicted RBP19.45■□□□□ 0.7
CIRBP-202ENST00000413636 HMGA1P17096 107 aaKnown RBP19.45■□□□□ 0.7
CIRBP-202ENST00000413636 MAN1A1P33908 653 aa19.45■□□□□ 0.7
CIRBP-202ENST00000413636 GABRB2P47870 512 aa19.45■□□□□ 0.7
CIRBP-202ENST00000413636 GSCP56915 257 aaPredicted RBP19.45■□□□□ 0.7
CIRBP-202ENST00000413636 TMCO3Q6UWJ1 677 aa19.45■□□□□ 0.7
CIRBP-202ENST00000413636 EP400NLQ6ZTU2 488 aa19.45■□□□□ 0.7
CIRBP-202ENST00000413636 SCUBE3Q8IX30 993 aa19.45■□□□□ 0.7
CIRBP-202ENST00000413636 HNRNPLLQ8WVV9 542 aaKnown RBP19.45■□□□□ 0.7
CIRBP-202ENST00000413636 C18orf8Q96DM3 657 aa19.45■□□□□ 0.7
CIRBP-202ENST00000413636 ZNF512Q96ME7 567 aaPredicted RBP19.45■□□□□ 0.7
CIRBP-202ENST00000413636 ULBP1Q9BZM6 244 aa19.45■□□□□ 0.7
CIRBP-202ENST00000413636 CLDND1Q9NY35 253 aa19.45■□□□□ 0.7
CIRBP-202ENST00000413636 IP6K2Q9UHH9 426 aa19.45■□□□□ 0.7
CIRBP-202ENST00000413636 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.45■□□□□ 0.7
CIRBP-202ENST00000413636 USP3Q9Y6I4 520 aa19.45■□□□□ 0.7
CIRBP-202ENST00000413636 DOCK6Q96HP0 2047 aa19.45■□□□□ 0.7
CIRBP-202ENST00000413636 PAPSS1O43252 624 aaPredicted RBP19.44■□□□□ 0.7
CIRBP-202ENST00000413636 PROSCO94903 275 aa19.44■□□□□ 0.7
CIRBP-202ENST00000413636 USP17L7P0C7H9 530 aa19.44■□□□□ 0.7
CIRBP-202ENST00000413636 YWHAQP27348 245 aa19.44■□□□□ 0.7
CIRBP-202ENST00000413636 PEX5P50542 639 aa19.44■□□□□ 0.7
CIRBP-202ENST00000413636 SNX16P57768 344 aa19.44■□□□□ 0.7
CIRBP-202ENST00000413636 CCDC85BQ15834 202 aaPredicted RBP19.44■□□□□ 0.7
CIRBP-202ENST00000413636 CTC1Q2NKJ3 1217 aa19.44■□□□□ 0.7
CIRBP-202ENST00000413636 ANKRD54Q6NXT1 300 aa19.44■□□□□ 0.7
CIRBP-202ENST00000413636 DNAJC24Q6P3W2 148 aa19.44■□□□□ 0.7
CIRBP-202ENST00000413636 TMC5Q6UXY8 1006 aa19.44■□□□□ 0.7
CIRBP-202ENST00000413636 PHLDB2Q86SQ0 1253 aa19.44■□□□□ 0.7
CIRBP-202ENST00000413636 C3orf20Q8ND61 904 aa19.44■□□□□ 0.7
CIRBP-202ENST00000413636 CLEC4CQ8WTT0 213 aa19.44■□□□□ 0.7
CIRBP-202ENST00000413636 NDRG1Q92597 394 aaKnown RBP19.44■□□□□ 0.7
CIRBP-202ENST00000413636 ZNF707Q96C28 371 aaPredicted RBP19.44■□□□□ 0.7
CIRBP-202ENST00000413636 PRKD2Q9BZL6 878 aa19.44■□□□□ 0.7
CIRBP-202ENST00000413636 EPC1Q9H2F5 836 aa19.44■□□□□ 0.7
CIRBP-202ENST00000413636 FBXO44Q9H4M3 255 aa19.44■□□□□ 0.7
CIRBP-202ENST00000413636 RBM12Q9NTZ6 932 aaKnown RBP19.44■□□□□ 0.7
CIRBP-202ENST00000413636 IL37Q9NZH6 218 aa19.44■□□□□ 0.7
CIRBP-202ENST00000413636 EHD2Q9NZN4 543 aa19.44■□□□□ 0.7
CIRBP-202ENST00000413636 XYLBO75191 536 aa19.43■□□□□ 0.7
CIRBP-202ENST00000413636 ZBED1O96006 694 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms