RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 DNAJB4Q9UDY4 337 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 RASAL2Q9UJF2 1139 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 NFU1Q9UMS0 254 aa17.98■□□□□ 0.47
PTPRC-206ENST00000413409 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.98■□□□□ 0.47
PTPRC-206ENST00000413409 TCRBV5S1A1TA0A578 114 aa17.97■□□□□ 0.47
PTPRC-206ENST00000413409 ESYT3A0FGR9 886 aa17.97■□□□□ 0.47
PTPRC-206ENST00000413409 CSDE1O75534 798 aaKnown RBP17.97■□□□□ 0.47
PTPRC-206ENST00000413409 RFPL2O75678 378 aa17.97■□□□□ 0.47
PTPRC-206ENST00000413409 PYGMP11217 842 aa17.97■□□□□ 0.47
PTPRC-206ENST00000413409 SLC11A1P49279 550 aa17.97■□□□□ 0.47
PTPRC-206ENST00000413409 FNTAP49354 379 aa17.97■□□□□ 0.47
PTPRC-206ENST00000413409 INCA1Q0VD86 236 aa17.97■□□□□ 0.47
PTPRC-206ENST00000413409 ACAP1Q15027 740 aa17.97■□□□□ 0.47
PTPRC-206ENST00000413409 TSSK4Q6SA08 328 aa17.97■□□□□ 0.47
PTPRC-206ENST00000413409 CATSPER4Q7RTX7 472 aa17.97■□□□□ 0.47
PTPRC-206ENST00000413409 C1orf131Q8NDD1 294 aaKnown RBP17.97■□□□□ 0.47
PTPRC-206ENST00000413409 TSPAN18Q96SJ8 248 aa17.97■□□□□ 0.47
PTPRC-206ENST00000413409 EMILIN2Q9BXX0 1053 aa17.97■□□□□ 0.47
PTPRC-206ENST00000413409 NXF1Q9UBU9 619 aaKnown RBP17.97■□□□□ 0.47
PTPRC-206ENST00000413409 PCYOX1Q9UHG3 505 aa17.97■□□□□ 0.47
PTPRC-206ENST00000413409 IP6K2Q9UHH9 426 aa17.97■□□□□ 0.47
PTPRC-206ENST00000413409 AMACRQ9UHK6 382 aa17.97■□□□□ 0.47
PTPRC-206ENST00000413409 STRIP2Q9ULQ0 834 aa17.97■□□□□ 0.47
PTPRC-206ENST00000413409 UTP11Q9Y3A2 253 aaKnown RBP17.97■□□□□ 0.47
PTPRC-206ENST00000413409 NUMBLQ9Y6R0 609 aa17.97■□□□□ 0.47
PTPRC-206ENST00000413409 PDCD11Q14690 1871 aaKnown RBP17.96■□□□□ 0.47
PTPRC-206ENST00000413409 MIA3Q5JRA6 1907 aa17.96■□□□□ 0.47
PTPRC-206ENST00000413409 KANSL1LA0AUZ9 987 aa17.96■□□□□ 0.46
PTPRC-206ENST00000413409 GOLGA6BA6NDN3 693 aa17.96■□□□□ 0.46
PTPRC-206ENST00000413409 CILPO75339 1184 aa17.96■□□□□ 0.46
PTPRC-206ENST00000413409 NPTXRO95502 500 aa17.96■□□□□ 0.46
PTPRC-206ENST00000413409 ECHS1P30084 290 aa17.96■□□□□ 0.46
PTPRC-206ENST00000413409 POLR2BP30876 1174 aaKnown RBP17.96■□□□□ 0.46
PTPRC-206ENST00000413409 HOXA11P31270 313 aaPredicted RBP17.96■□□□□ 0.46
PTPRC-206ENST00000413409 GBP1P32455 592 aa17.96■□□□□ 0.46
PTPRC-206ENST00000413409 HSPA9P38646 679 aaKnown RBP17.96■□□□□ 0.46
PTPRC-206ENST00000413409 DR1Q01658 176 aa17.96■□□□□ 0.46
PTPRC-206ENST00000413409 SPEM2Q0P670 501 aa17.96■□□□□ 0.46
PTPRC-206ENST00000413409 DNAJC24Q6P3W2 148 aa17.96■□□□□ 0.46
PTPRC-206ENST00000413409 CPNE8Q86YQ8 564 aa17.96■□□□□ 0.46
PTPRC-206ENST00000413409 PRELID2Q8N945 189 aa17.96■□□□□ 0.46
PTPRC-206ENST00000413409 IFT81Q8WYA0 676 aa17.96■□□□□ 0.46
PTPRC-206ENST00000413409 LPPQ93052 612 aa17.96■□□□□ 0.46
PTPRC-206ENST00000413409 HPDLQ96IR7 371 aa17.96■□□□□ 0.46
PTPRC-206ENST00000413409 RHOBTB2Q9BYZ6 727 aa17.96■□□□□ 0.46
PTPRC-206ENST00000413409 SDCBP2Q9H190 292 aa17.96■□□□□ 0.46
PTPRC-206ENST00000413409 SMYD3Q9H7B4 428 aa17.96■□□□□ 0.46
PTPRC-206ENST00000413409 TBC1D13Q9NVG8 400 aa17.96■□□□□ 0.46
PTPRC-206ENST00000413409 DPP3Q9NY33 737 aa17.96■□□□□ 0.46
PTPRC-206ENST00000413409 MEIS3P2A8K0S8 358 aa17.95■□□□□ 0.46
PTPRC-206ENST00000413409 INPPL1O15357 1258 aa17.95■□□□□ 0.46
PTPRC-206ENST00000413409 TTI1O43156 1089 aa17.95■□□□□ 0.46
PTPRC-206ENST00000413409 TBC1D4O60343 1298 aa17.95■□□□□ 0.46
PTPRC-206ENST00000413409 RAD23BP54727 409 aa17.95■□□□□ 0.46
PTPRC-206ENST00000413409 SIX1Q15475 284 aaPredicted RBP17.95■□□□□ 0.46
PTPRC-206ENST00000413409 TERF2Q15554 542 aa17.95■□□□□ 0.46
PTPRC-206ENST00000413409 WDR72Q3MJ13 1102 aa17.95■□□□□ 0.46
PTPRC-206ENST00000413409 PPP1R15BQ5SWA1 713 aa17.95■□□□□ 0.46
PTPRC-206ENST00000413409 RHOT1Q8IXI2 618 aa17.95■□□□□ 0.46
PTPRC-206ENST00000413409 KATNAL2Q8IYT4 538 aa17.95■□□□□ 0.46
PTPRC-206ENST00000413409 C3orf20Q8ND61 904 aa17.95■□□□□ 0.46
PTPRC-206ENST00000413409 TFAP2BQ92481 460 aa17.95■□□□□ 0.46
PTPRC-206ENST00000413409 KIF12Q96FN5 646 aa17.95■□□□□ 0.46
PTPRC-206ENST00000413409 DDX27Q96GQ7 796 aaKnown RBP17.95■□□□□ 0.46
PTPRC-206ENST00000413409 SHDQ96IW2 340 aa17.95■□□□□ 0.46
PTPRC-206ENST00000413409 TRIM7Q9C029 511 aa17.95■□□□□ 0.46
PTPRC-206ENST00000413409 SETXQ7Z333 2677 aaKnown RBP17.94■□□□□ 0.46
PTPRC-206ENST00000413409 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.94■□□□□ 0.46
PTPRC-206ENST00000413409 TMEM191CA6NGB0 347 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 FAM170BA6NMN3 283 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 HSF2BPO75031 334 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 CD72P21854 359 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 RAP1GAPP47736 663 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 DRG2P55039 364 aaKnown RBP17.94■□□□□ 0.46
PTPRC-206ENST00000413409 LRRC38Q5VT99 294 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 DUPD1Q68J44 220 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 AADACL2Q6P093 401 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 ERICH1Q86X53 443 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 ZNF280BQ86YH2 543 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 JAMLQ86YT9 394 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 LRRC52Q8N7C0 313 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 NIPA2Q8N8Q9 360 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 SLC4A11Q8NBS3 891 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 NETO1Q8TDF5 533 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 SMG7Q92540 1137 aaKnown RBP17.94■□□□□ 0.46
PTPRC-206ENST00000413409 SLCO2A1Q92959 643 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 LRRC45Q96CN5 670 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 GDAP1L1Q96MZ0 367 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 SH3GL2Q99962 352 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 FAM129AQ9BZQ8 928 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 CNTN3Q9P232 1028 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 WDR35Q9P2L0 1181 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 ANGPTL2Q9UKU9 493 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 KIAA1257Q9ULG3 409 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 AGAP1Q9UPQ3 857 aa17.94■□□□□ 0.46
PTPRC-206ENST00000413409 PODXLO00592 558 aa17.93■□□□□ 0.46
PTPRC-206ENST00000413409 PAPLNO95428 1278 aa17.93■□□□□ 0.46
PTPRC-206ENST00000413409 SPATA31D3P0C874 917 aa17.93■□□□□ 0.46
PTPRC-206ENST00000413409 VDRP11473 427 aa17.93■□□□□ 0.46
PTPRC-206ENST00000413409 CD19P15391 556 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms