RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 GAD2Q05329 585 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 CCDC186Q7Z3E2 898 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 KIAA2013Q8IYS2 634 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 MLKLQ8NB16 471 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 RBBP8NLQ8NC74 664 aaPredicted RBP10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 BHMTQ93088 406 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 KREMEN1Q96MU8 473 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 HHIPQ96QV1 700 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 PNKPQ96T60 521 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 ZSWIM1Q9BR11 485 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 UBXN6Q9BZV1 441 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 NUP62CLQ9H1M0 184 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 PNPLA8Q9NP80 782 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 CYLDQ9NQC7 956 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 SPHK2Q9NRA0 654 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 NCDNQ9UBB6 729 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 DNMT3LQ9UJW3 386 aa10.7□□□□□ -0.7
NCKIPSD-202ENST00000413374 SLC12A8A0AV02 714 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 TBC1D3BA6NDS4 549 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 M0QYV0 167 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 O00370 1275 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 XPO1O14980 1071 aaKnown RBP10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 PMM2O15305 246 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 GREM1O60565 184 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 USP8P40818 1118 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 BCAT1P54687 386 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 MARSP56192 900 aaKnown RBP10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 ADIGQ0VDE8 80 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 BST2Q10589 180 aaKnown RBP10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 SIM2Q14190 667 aaPredicted RBP10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 DMC1Q14565 340 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 ARHGAP44Q17R89 818 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 DPCR1Q3MIW9 517 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 FBXO43Q4G163 708 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 RAB41Q5JT25 222 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 BTBD8Q5XKL5 378 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 PMF1Q6P1K2 205 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 FOXR2Q6PJQ5 311 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 HTR3DQ70Z44 454 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 CEP68Q76N32 757 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 RSRC2Q7L4I2 434 aaKnown RBP10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 LONP2Q86WA8 852 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 IRF2BP1Q8IU81 584 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 EDEM1Q92611 657 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 RUBCNQ92622 972 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 SECISBP2LQ93073 1101 aaKnown RBP10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 ERLEC1Q96DZ1 483 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 IPO9Q96P70 1041 aaKnown RBP10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 FAM126AQ9BYI3 521 aaPredicted RBP10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 MIS12Q9H081 205 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 ACP6Q9NPH0 428 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 ARHGEF4Q9NR80 690 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 PLK2Q9NYY3 685 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 LSM7Q9UK45 103 aaKnown RBP10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 KIAA1257Q9ULG3 409 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 SMG5Q9UPR3 1016 aaKnown RBP10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 INVSQ9Y283 1065 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 COL4A2P08572 1712 aa10.69□□□□□ -0.7
NCKIPSD-202ENST00000413374 USP34Q70CQ2 3546 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 YJEFN3A6XGL0 299 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 E7ENQ6 273 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 NEDD8-MDP1E9PL57 170 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 GABBR2O75899 941 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 STC2O76061 302 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 KAT7O95251 611 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 KLKB1P03952 638 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 APODP05090 189 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 PAEPP09466 180 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 PSEN1P49768 467 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 GOLGA8FQ08AF8 430 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 GOLGA8DPQ0D2H9 430 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 CNGA2Q16280 664 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 LCLAT1Q6UWP7 414 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 TADA2BQ86TJ2 420 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 SIX6OS1Q8N1H7 587 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 GPT2Q8TD30 523 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 USP33Q8TEY7 942 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 CLEC4CQ8WTT0 213 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 RNF139Q8WU17 664 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 OTUB2Q96DC9 234 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 BBS2Q9BXC9 721 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 EPC1Q9H2F5 836 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 FAM124BQ9H5Z6 455 aaPredicted RBP10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 CLIC5Q9NZA1 410 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 MARCH2Q9P0N8 246 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 SFMBT1Q9UHJ3 866 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 RAB23Q9ULC3 237 aa10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 ZFHX2Q9C0A1 2572 aaPredicted RBP10.68□□□□□ -0.7
NCKIPSD-202ENST00000413374 PES1O00541 588 aaKnown RBP10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 DCLK1O15075 740 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 AXIN1O15169 862 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 TSPAN3O60637 253 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 TULP3O75386 442 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 LETM1O95202 739 aaPredicted RBP10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 PAPSS2O95340 614 aaPredicted RBP10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 KLF8O95600 359 aaPredicted RBP10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 SETSIPP0DME0 302 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 TYRP14679 529 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 CORO1AP31146 461 aaKnown RBP10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 GRIA2P42262 883 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms