RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 CETN1Q12798 172 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 ZBTB17Q13105 803 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 TARDBPQ13148 414 aaKnown RBP eCLIP6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 AIMP2Q13155 320 aaKnown RBP6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 CUL2Q13617 745 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 PTK6Q13882 451 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 NFIXQ14938 502 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 MED22Q15528 200 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 INAQ16352 499 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 USP39Q53GS9 565 aaKnown RBP6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 NHSL2Q5HYW2 709 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 PRAMEF9Q5VWM5 478 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 TPGS2Q68CL5 300 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 ARHGAP11AQ6P4F7 1023 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 SUSD1Q6UWL2 747 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 UNQ6494/PRO21346Q6UXR6 183 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 LINC00696Q6ZRV3 163 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 RSPH3Q86UC2 560 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 YAF2Q8IY57 180 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 LRRC43Q8N309 656 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 IL22RA1Q8N6P7 574 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 MRPL43Q8N983 215 aaKnown RBP6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 SYT2Q8N9I0 419 aaPredicted RBP6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 POC5Q8NA72 575 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 CCDC110Q8TBZ0 833 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 PRPF31Q8WWY3 499 aaKnown RBP6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 CPT1BQ92523 772 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 KCTD12Q96CX2 325 aaKnown RBP6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 KLHDC7BQ96G42 594 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 CTAGE1Q96RT6 745 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 AGAP2Q99490 1192 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 SLC12A9Q9BXP2 914 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 VPS16Q9H269 839 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 DPH5Q9H2P9 285 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 MRPL46Q9H2W6 279 aaKnown RBP6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 CLSTN2Q9H4D0 955 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 ZNF304Q9HCX3 659 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 LTB4R2Q9NPC1 389 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 NMRK1Q9NWW6 199 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 CLIP2Q9UDT6 1046 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 USP18Q9UMW8 372 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 ZNF804BA4D1E1 1349 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 NSD2O96028 1365 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 CD109Q6YHK3 1445 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 ARHGEF37A1IGU5 675 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 ZSCAN5CA6NGD5 496 aaPredicted RBP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 SAC3D1A6NKF1 404 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 H3BM21 787 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 DYRK3O43781 588 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 RNGTTO60942 597 aaKnown RBP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 PCDH8O95206 1070 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 NTSR2O95665 410 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 ITGBL1O95965 494 aaPredicted RBP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 INHBAP08476 426 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 KRT4P19013 534 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 GDI1P31150 447 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 GJA4P35212 333 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 CASP3P42574 277 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 RABIFP47224 123 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 CPA2P48052 419 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 CPT1AP50416 773 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 CCDC15Q0P6D6 951 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 KIF5AQ12840 1032 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 LMAN2Q12907 356 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 SP140Q13342 867 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 CTBP1Q13363 440 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 TDGQ13569 410 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 MXD4Q14582 209 aaPredicted RBP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 SLC5A9Q2M3M2 681 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 SUPT20HL1Q3ZLR7 823 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 FAM182BQ5T319 152 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 ATXN7L2Q5T6C5 722 aaPredicted RBP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 C12orf60Q5U649 245 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 TAF3Q5VWG9 929 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 KLHL35Q6PF15 583 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 FAM180AQ6UWF9 173 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 CRELD2Q6UXH1 353 aaPredicted RBP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 SYT9Q86SS6 491 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 FAM160B2Q86V87 743 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 CCDC28AQ8IWP9 274 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 RHOT2Q8IXI1 618 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 SYCP3Q8IZU3 236 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 AFAP1Q8N556 730 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 OR6C4Q8NGE1 309 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 OR56B2PQ8NGI1 322 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 RFWD2Q8NHY2 731 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 SNIP1Q8TAD8 396 aaKnown RBP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 ZCCHC10Q8TBK6 192 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 HASPINQ8TF76 798 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 MRPS27Q92552 414 aaKnown RBP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 CASP10Q92851 521 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 PERPQ96FX8 193 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 TMX3Q96JJ7 454 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 NLRP4Q96MN2 994 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 PTCHD1Q96NR3 888 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 PKP4Q99569 1192 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 NAA11Q9BSU3 229 aaPredicted RBP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 NUCKS1Q9H1E3 243 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms