RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 CETN1Q12798 172 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 ZBTB17Q13105 803 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 TARDBPQ13148 414 aaKnown RBP eCLIP6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 AIMP2Q13155 320 aaKnown RBP6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 CUL2Q13617 745 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 PTK6Q13882 451 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 NFIXQ14938 502 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 MED22Q15528 200 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 INAQ16352 499 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 USP39Q53GS9 565 aaKnown RBP6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 NHSL2Q5HYW2 709 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 PRAMEF9Q5VWM5 478 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 TPGS2Q68CL5 300 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 ARHGAP11AQ6P4F7 1023 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 SUSD1Q6UWL2 747 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 UNQ6494/PRO21346Q6UXR6 183 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 LINC00696Q6ZRV3 163 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 RSPH3Q86UC2 560 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 YAF2Q8IY57 180 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 LRRC43Q8N309 656 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 IL22RA1Q8N6P7 574 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 MRPL43Q8N983 215 aaKnown RBP6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 SYT2Q8N9I0 419 aaPredicted RBP6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 POC5Q8NA72 575 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 CCDC110Q8TBZ0 833 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 PRPF31Q8WWY3 499 aaKnown RBP6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 CPT1BQ92523 772 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 KCTD12Q96CX2 325 aaKnown RBP6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 KLHDC7BQ96G42 594 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 CTAGE1Q96RT6 745 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 AGAP2Q99490 1192 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 SLC12A9Q9BXP2 914 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 VPS16Q9H269 839 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 DPH5Q9H2P9 285 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 MRPL46Q9H2W6 279 aaKnown RBP6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 CLSTN2Q9H4D0 955 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 ZNF304Q9HCX3 659 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 LTB4R2Q9NPC1 389 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 NMRK1Q9NWW6 199 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 CLIP2Q9UDT6 1046 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 USP18Q9UMW8 372 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 ZNF804BA4D1E1 1349 aa6.19□□□□□ -1.42
CBX1P3-201ENST00000413296 NSD2O96028 1365 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 CD109Q6YHK3 1445 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 ARHGEF37A1IGU5 675 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 ZSCAN5CA6NGD5 496 aaPredicted RBP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 SAC3D1A6NKF1 404 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 H3BM21 787 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 DYRK3O43781 588 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 RNGTTO60942 597 aaKnown RBP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 PCDH8O95206 1070 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 NTSR2O95665 410 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 ITGBL1O95965 494 aaPredicted RBP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 INHBAP08476 426 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 KRT4P19013 534 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 GDI1P31150 447 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 GJA4P35212 333 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 CASP3P42574 277 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 RABIFP47224 123 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 CPA2P48052 419 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 CPT1AP50416 773 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 CCDC15Q0P6D6 951 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 KIF5AQ12840 1032 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 LMAN2Q12907 356 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 SP140Q13342 867 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 CTBP1Q13363 440 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 TDGQ13569 410 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 MXD4Q14582 209 aaPredicted RBP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 SLC5A9Q2M3M2 681 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 SUPT20HL1Q3ZLR7 823 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 FAM182BQ5T319 152 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 ATXN7L2Q5T6C5 722 aaPredicted RBP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 C12orf60Q5U649 245 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 TAF3Q5VWG9 929 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 KLHL35Q6PF15 583 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 FAM180AQ6UWF9 173 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 CRELD2Q6UXH1 353 aaPredicted RBP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 SYT9Q86SS6 491 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 FAM160B2Q86V87 743 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 CCDC28AQ8IWP9 274 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 RHOT2Q8IXI1 618 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 SYCP3Q8IZU3 236 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 AFAP1Q8N556 730 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 OR6C4Q8NGE1 309 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 OR56B2PQ8NGI1 322 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 RFWD2Q8NHY2 731 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 SNIP1Q8TAD8 396 aaKnown RBP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 ZCCHC10Q8TBK6 192 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 HASPINQ8TF76 798 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 MRPS27Q92552 414 aaKnown RBP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 CASP10Q92851 521 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 PERPQ96FX8 193 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 TMX3Q96JJ7 454 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 NLRP4Q96MN2 994 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 PTCHD1Q96NR3 888 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 PKP4Q99569 1192 aa6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 NAA11Q9BSU3 229 aaPredicted RBP6.18□□□□□ -1.42
CBX1P3-201ENST00000413296 NUCKS1Q9H1E3 243 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms