RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 IRF2BP2Q7Z5L9 587 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.85□□□□□ -0.99
SYNE1-211ENST00000413186 ZNF557Q8N988 423 aaPredicted RBP8.85□□□□□ -0.99
SYNE1-211ENST00000413186 FBXO22Q8NEZ5 403 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 KRT35Q92764 455 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 ELMO3Q96BJ8 720 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 ARHGEF26Q96DR7 871 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 PALMDQ9NP74 551 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 CYLDQ9NQC7 956 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 AP4E1Q9UPM8 1137 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 SNX24Q9Y343 169 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 HAS3O00219 553 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 GIPC1O14908 333 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 WARSP23381 471 aaKnown RBP8.85□□□□□ -0.99
SYNE1-211ENST00000413186 STX2P32856 288 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 OR1D2P34982 312 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 NOMO3P69849 1222 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 FMO1Q01740 532 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 NUGGCQ68CJ6 796 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 CES5AQ6NT32 575 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 WDR93Q6P2C0 686 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 SLC13A5Q86YT5 568 aaPredicted RBP8.85□□□□□ -0.99
SYNE1-211ENST00000413186 SCUBE3Q8IX30 993 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 DEFB106AQ8N104 65 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 EMC1Q8N766 993 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 MYCBPAPQ8TBZ2 947 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 C2orf15Q8WU43 125 aaKnown RBP8.85□□□□□ -0.99
SYNE1-211ENST00000413186 C1orf54Q8WWF1 131 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 TTC25Q96NG3 672 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 MRPL45Q9BRJ2 306 aaKnown RBP8.85□□□□□ -0.99
SYNE1-211ENST00000413186 ELAC1Q9H777 363 aaKnown RBP8.85□□□□□ -0.99
SYNE1-211ENST00000413186 KLHL11Q9NVR0 708 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 HNRNPCL2B2RXH8 293 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 NT5C1B-RDH14C9J2C7 533 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 HNRNPCL1O60812 293 aaKnown RBP8.85□□□□□ -0.99
SYNE1-211ENST00000413186 FGF19O95750 216 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 GLUD1P00367 558 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 RBP3P10745 1247 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 FGFR1P11362 822 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 STIP1P31948 543 aaKnown RBP8.85□□□□□ -0.99
SYNE1-211ENST00000413186 RASSF2P50749 326 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 OXCT1P55809 520 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 GPS1Q13098 491 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 BYSLQ13895 437 aaKnown RBP8.85□□□□□ -0.99
SYNE1-211ENST00000413186 ACCSLQ4AC99 568 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 TFDP3Q5H9I0 405 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 ACBD5Q5T8D3 534 aaPredicted RBP8.85□□□□□ -0.99
SYNE1-211ENST00000413186 IL31Q6EBC2 164 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 SLC39A4Q6P5W5 647 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 FAM131BQ86XD5 332 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 PALB2Q86YC2 1186 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 GANCQ8TET4 914 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 C11orf84Q9BUA3 381 aaPredicted RBP8.85□□□□□ -0.99
SYNE1-211ENST00000413186 FOXP3Q9BZS1 431 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 UBE2OQ9C0C9 1292 aaKnown RBP8.85□□□□□ -0.99
SYNE1-211ENST00000413186 MUC3BQ9H195 1237 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 ATXN3LQ9H3M9 355 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 ERVK-5Q9HDB9 667 aa8.85□□□□□ -0.99
SYNE1-211ENST00000413186 FAF1Q9UNN5 650 aaPredicted RBP8.85□□□□□ -0.99
SYNE1-211ENST00000413186 GOLGA8QA0A0J9YX86 632 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 GOLGA8OA6NCC3 632 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 F8VP50 259 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 GOLGA8NF8WBI6 632 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 CAPN15O75808 1086 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 ATP5C1P36542 298 aaKnown RBP8.84□□□□□ -0.99
SYNE1-211ENST00000413186 PEX19P40855 299 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 CDH18Q13634 790 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 LAMB3Q13751 1172 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 SMTNL2Q2TAL5 461 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 INTS6LQ5JSJ4 861 aaKnown RBP8.84□□□□□ -0.99
SYNE1-211ENST00000413186 UCMAQ8WVF2 138 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 SNF8Q96H20 258 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 TOX2Q96NM4 488 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 NUF2Q9BZD4 464 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 TBC1D13Q9NVG8 400 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 PAK5Q9P286 719 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 CHORDC1Q9UHD1 332 aaPredicted RBP8.84□□□□□ -0.99
SYNE1-211ENST00000413186 ECM29Q5VYK3 1845 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 NCAM2O15394 837 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 ADAMTS4O75173 837 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 MCCD1P59942 119 aaPredicted RBP8.84□□□□□ -0.99
SYNE1-211ENST00000413186 BIRC2Q13490 618 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 WDR59Q6PJI9 974 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 ZC3H3Q8IXZ2 948 aaKnown RBP8.84□□□□□ -0.99
SYNE1-211ENST00000413186 LRRC15Q8TF66 581 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 WNT8BQ93098 351 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 OSGEPQ9NPF4 335 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 ASAH2Q9NR71 780 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 THG1LQ9NWX6 298 aaKnown RBP8.84□□□□□ -0.99
SYNE1-211ENST00000413186 STXBP5LQ9Y2K9 1186 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 ATP8A1Q9Y2Q0 1164 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 ARFGEF1Q9Y6D6 1849 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 C3orf70A6NLC5 250 aaPredicted RBP8.84□□□□□ -0.99
SYNE1-211ENST00000413186 CES2O00748 559 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 KCNN4O15554 427 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 GPR32O75388 356 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 IQCF3P0C7M6 154 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 FNTAP49354 379 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 HECTD3Q5T447 861 aa8.84□□□□□ -0.99
SYNE1-211ENST00000413186 ERMARDQ5T6L9 678 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms